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Pristinamycin (NSC-246121)

Alias: RP-7293; NSC-246121; RP7293; NSC246121; Virginiamycin antibiotic complex;RP 7293; NSC 246121; Antibiotic 899; Founderguard; Mikamycin; RP 7293; Stapyocine; Streptogramin;Virginiamycin Complex
Cat No.:V5304 Purity: ≥95%
Pristinamycin (Virginiamycin antibiotic complex; NSC-246121; Antibiotic 899; Founderguard) is a novel,naurally occuring streptogramin-like and potent antibiotic used primarily in the treatment of staphylococcal infections, and to a lesser extent streptococcal infections.
Pristinamycin (NSC-246121)
Pristinamycin (NSC-246121) Chemical Structure CAS No.: 11006-76-1
Product category: New6
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
25mg
Other Sizes

Other Forms of Pristinamycin (NSC-246121):

  • Virginiamycin M1
  • Virginiamycin S1
Official Supplier of:
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Top Publications Citing lnvivochem Products
Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Pristinamycin (Virginiamycin antibiotic complex; NSC-246121; Antibiotic 899; Founderguard) is a novel, naurally occuring streptogramin-like and potent antibiotic used primarily in the treatment of staphylococcal infections, and to a lesser extent streptococcal infections. Pristinamycin is a mixture of two components that have a synergistic antibacterial action. Pristinamycin IA is a macrolide, and results in pristinamycin's having a similar spectrum of action to erythromycin. Virginiamycin complex contains two streptogramin antibiotics, virginiamycin M1 (75%) and virginiamycin S1 (25%).

Biological Activity I Assay Protocols (From Reference)
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
This article describes the results of residue determination of the growth promoters carbadox, tylosin, and virginiamycin in pig kidneys, liver, and muscle during feeding trials, as well as the analytical methods used. Residues of the carbadox metabolite quinoxaloline-2-carboxylic acid were detected in pig liver after a 30-day withdrawal period following dietary supplementation with 20 mg/kg carbadox. No residues were detected in muscle with zero withdrawal time. The limits of detection for both tissues were 0.01 mg/kg. Residues of virginiamycin and tylosin were not detected in pigs after dietary supplementation with 50 mg/kg and 40 mg/kg virginiamycin, respectively, even with zero withdrawal time. Tylosin residues of 0.06 mg/kg or less were detected in the liver and kidneys of pigs fed 200 or 400 mg/kg tylosin and slaughtered within 3 hours of the last feeding.
Metabolism/Metabolites
Reduction of virginiamycin S with sodium borohydride yields allodihydrovirginiamycin S and n-dihydrovirginiamycin S. Reduction of the toluenesulfonylhydrazone of virginiamycin S with sodium cyanoborohydride yields deoxyvirginiamycin S. These compounds have lower activity than virginiamycin S. Like virginiamycin S, they enhance the activity of virginiamycin M1.
Virginiabutyrolactones (VBs) are one of the butyrolactone self-regulators in Streptomyces genus and serve as the main signal for triggering virginiamycin in Streptomyces virginiae. During biosynthesis, Streptomyces (S. virginiae) possesses a specific binding protein, BarA. To elucidate the in vivo function of BarA in the VB-mediated virginiamycin biosynthesis signaling pathway, we constructed two barA mutant strains (strains NH1 and NH2) through homologous recombination. In strain NH1, a 99 bp EcoT14I fragment within the barA gene was deleted, resulting in a 33-amino acid residue in-frame deletion, including the second helix of a possible helical-turn-helical DNA-binding motif. Strain NH1 exhibited the same growth rate on both solid and liquid media as wild-type Streptomyces, and its morphological behavior remained largely unchanged, indicating that the VB-BarA pathway is not involved in the morphological regulation of Streptomyces. In contrast, virginiamycin production in strain NH1 occurred 6 hours earlier than in the wild-type strain, demonstrating for the first time that BarA actively participates in the regulation of virginiamycin production and suggesting that BarA plays a repressive role in virginiamycin biosynthesis. In strain NH2, the EcoNI-SmaI fragment within the barA gene was replaced by an inverted neomycin resistance cassette, resulting in a C-terminal truncated BarA that retained the complete helical-turn-helical domain. In the NH2 strain and in plasmid strains integrating both the complete and mutant barA genes, virginiamycin production was suppressed regardless of the presence of virginiamycin (VB), indicating a dominant advantage of mutant BarA with the intact DNA-binding domain over wild-type BarA. These results further support the hypothesis that BarA is a repressor of virginiamycin synthesis and demonstrate that the helix-turn-helix motif is crucial for its function. In the NH1 strain, VB synthesis was also suppressed, suggesting that BarA is a pleiotropic regulatory protein that controls not only virginiamycin synthesis but also the biosynthesis of autoregulatory proteins. Previous studies have shown that the central loop of the 23S rRNA V domain is located within the peptidyl transferase domain of the ribosome. This enzymatic activity is inhibited by several antibiotics, including type A (virginiamycin M or VM) and type B (virginiamycin S or VS) synergists, which have synergistic effects in vivo. This study investigated the ability of VM and VS to alter the accessibility of 23S rRNA base pairs to chemical reagents in the ribosome. VM protects rRNA bases A2037, A2042, G2049, and C2050. Furthermore, when the ribosome is incubated with both components of virginiamycin, base A2062, which was originally protected only by VS, becomes reactive with dimethyl sulfate (DMS). These altered reactivity of different rRNA bases located in or near the central loop of the V domain to chemical reagents provide experimental evidence for VM-induced ribosome conformational changes.
References
Appl Environ Microbiol. 2015 Oct;81(19):6621-36.
Additional Infomation
Virginiamycin is a streptomycin antibiotic, similar to pristaprine and quinuprine/dalfopristin. It is a combination of pristaprine IIA and virginiamycin S1. Virginiamycin is used in the fuel ethanol industry to prevent microbial contamination and in livestock for the prevention and treatment of infections. According to a USDA study, antibiotic use can reduce feed costs for piglets by up to 30%. Virginiamycin is a class of streptomycin-associated peptide antibiotics isolated from Streptomyces virginiana and other Streptomyces bacteria. Virginiamycin consists of two main components: virginiamycin M1 and virginiamycin S1. These drugs bind to ribosomes and inhibit their assembly, thereby preventing protein synthesis. These antibiotics are effective against Gram-positive bacteria and are primarily used in veterinary clinics. (NCI04) A mixture of antibiotics originally isolated from Streptomyces pristinaspiralis. It is a mixture of streptomycin group A compounds (prilistatin IIA and IIB) and streptomycin group B compounds (prilistatin IA, prilistatin IB, prilistatin IC).
See also: Virginiamycin (note moved to).
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C71H84N10O17
Molecular Weight
1349.5
Exact Mass
1348.601
CAS #
11006-76-1
Related CAS #
11006-76-1; 21411-53-0; 23152-29-6;
PubChem CID
11979535
Appearance
Reddish-yellow powder
Melting Point
170-178ºC
LogP
4.992
Hydrogen Bond Donor Count
6
Hydrogen Bond Acceptor Count
19
Rotatable Bond Count
7
Heavy Atom Count
98
Complexity
2640
Defined Atom Stereocenter Count
0
SMILES
CCC1C(=O)N2CCCC2C(=O)N(C(C(=O)N3CCC(=O)CC3C(=O)NC(C(=O)OC(C(C(=O)N1)NC(=O)C4=C(C=CC=N4)O)C)C5=CC=CC=C5)CC6=CC=CC=C6)C.CC1/C=C\C(=O)NC/C=C\C(=C/C(CC(=O)CC2=NC(=CO2)C(=O)N3CCC=C3C(=O)OC1C(C)C)O)\C
InChi Key
MVTQIFVKRXBCHS-YWAQVZITSA-N
InChi Code
InChI=1S/C43H49N7O10.C28H35N3O7/c1-4-29-40(56)49-21-12-17-30(49)41(57)48(3)32(23-26-13-7-5-8-14-26)42(58)50-22-19-28(51)24-31(50)37(53)47-35(27-15-9-6-10-16-27)43(59)60-25(2)34(38(54)45-29)46-39(55)36-33(52)18-11-20-44-36;1-17(2)26-19(4)9-10-24(34)29-11-5-7-18(3)13-20(32)14-21(33)15-25-30-22(16-37-25)27(35)31-12-6-8-23(31)28(36)38-26/h5-11,13-16,18,20,25,29-32,34-35,52H,4,12,17,19,21-24H2,1-3H3,(H,45,54)(H,46,55)(H,47,53);5,7-10,13,16-17,19-20,26,32H,6,11-12,14-15H2,1-4H3,(H,29,34)/b;7-5-,10-9+,18-13+/t25-,29-,30+,31+,32+,34+,35+;19-,20-,26-/m11/s1
Chemical Name
N-((6R,9S,10R,13S,15aS,22S,24aS)-22-benzyl-6-ethyl-10,23-dimethyl-5,8,12,15,17,21,24-heptaoxo-13-phenyldocosahydro-12H-pyrido[2,1-f]pyrrolo[2,1-l][1]oxa[4,7,10,13,16]pentaazacyclononadecin-9-yl)-3-hydroxypicolinamide compound with (12Z,6R,7R,8E,13Z,15E,17S)-17-hydroxy-6-isopropyl-7,15-dimethyl-32,33-dihydro-31H-5-oxa-11-aza-1(4,2)-oxazola-3(1,5)-pyrrolacycloicosaphane-8,13,15-triene-2,4,10,19-tetraone (1:1)
Synonyms
RP-7293; NSC-246121; RP7293; NSC246121; Virginiamycin antibiotic complex;RP 7293; NSC 246121; Antibiotic 899; Founderguard; Mikamycin; RP 7293; Stapyocine; Streptogramin;Virginiamycin Complex
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.7410 mL 3.7051 mL 7.4102 mL
5 mM 0.1482 mL 0.7410 mL 1.4820 mL
10 mM 0.0741 mL 0.3705 mL 0.7410 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT03177343 COMPLETED Bone and Joint Infection
Methicillin Susceptible Staphylococcus Aureus (MSSA) Infection
Hospices Civils de Lyon 2015-02
NCT02332577 TERMINATED Drug: PRISTINAMYCIN XRP7263
Drug: Amoxicillin
Drug: Amoxicillin Placebo
Drug: PRISTINAMYCIN Placebo
Pneumonia Sanofi 2015-04-30 Phase 4
NCT00393744 COMPLETED Drug: pristinamycin
Drug: amoxicillin
Tonsillitis Sanofi 2006-10 Phase 3
NCT05074147 NOT YET RECRUITING Drug: Reduction in the duration of
antibiotic therapy 3 weeks or 6 weeks
Osteomyelitis - Foot Tourcoing Hospital 2022-05 Phase 3
Biological Data
  • Pristinamycin production of the S. pristinaespiralis wild-type strain (WT) and the papR mutant papR1::apr, papR2::apr, papR3::apr, papR4::apr, papR5::apr, papR6::apr, and ΔpapR1 ΔpapR4 mutant strains.[1].Appl Environ Microbiol. 2015 Oct;81(19):6621-36.
  • (A) ARE sequences and their respective conformities in front of the genes spbR, papR1, papR2, papR4, and papR5. The sequences were compared to the consensus “IUPAC string” mentioned by Folcher et al. The S. pristinaespiralis-specific ARE consensus sequence (prist) is shown in the lowest row. The underlined sequences represent half sites of the palindrome, supposed to be bound by the TetR-like monomers. (B) SARP binding sequences of pristinamycin-related genes. Heptameric repeats, which are supposed to be bound by two SARP monomers and RNA polymerase, are shown in bold. The S. pristinaespiralis-specific SARP consensus sequence is shown in the lowest row.[1].Appl Environ Microbiol. 2015 Oct;81(19):6621-36.
  • (A) EMSAs with His PapR2 and Cy5-labeled promoter regions of the pristinamycin structural genes snbA-pipA, snbC, snaB, and snaE3. −, negative control without protein; +, addition of purified His-tagged PapR protein. (B) EMSAs with His PapR1 and Cy5-labeled promoter regions of the pristinamycin structural genes snbA-pipA, snbC, and snaB. (C) EMSAs with the His PapR2, His PapR4, His PapR5, and His PapR3 and Cy5-labeled promoter regions of different papR genes. The specificity of the reaction was checked by the addition of 500-fold specific (S) and unspecific (U) unlabeled DNA.[1].Appl Environ Microbiol. 2015 Oct;81(19):6621-36.
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