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BI2536-PEG2-Halo

BI2536-PEG2-Halo is a bifunctional molecule consisting of a Halo-tagged ligand and the Polo-like kinase 1 (PLK1) inhibitor BI-2536.
BI2536-PEG2-Halo
BI2536-PEG2-Halo Chemical Structure Product category: PLK
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
Other Sizes
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Product Description
BI2536-PEG2-Halo is a bifunctional molecule that contains a Halo tag ligand and a Polo-like kinase 1 (PLK1) inhibitor, BI-2536. BI2536-PEG2-Halo inhibits the proliferation of 293T cells containing a Halo-p53R273H(FL)-mCherry tag (IC50=23 nM) and exhibits selective toxicity against p53 mutant cancer cells.
BI2536-PEG2-Halo is a bifunctional research molecule that integrates a potent Polo-like kinase 1 (PLK1) inhibitor (BI-2536) with a HaloTag ligand via a PEG2 linker. This conjugate enables selective inhibition of PLK1 in cells expressing a HaloTag fusion protein (e.g., Halo-p53R273H(FL)-mCherry). The compound is used to validate target engagement and to induce selective toxicity in p53-mutant cancer cells expressing the HaloTag.
Biological Activity I Assay Protocols (From Reference)
Targets
BI2536-PEG2-Halo targets PLK1 (Polo-like kinase 1), a serine/threonine kinase essential for mitotic entry, centrosome maturation, bipolar spindle formation, and cytokinesis. PLK1 is overexpressed in many cancers and is a validated anti-cancer target. The HaloTag ligand moiety binds covalently to HaloTag protein (an engineered dehalogenase), allowing the conjugate to be selectively anchored to HaloTag-fused proteins (e.g., mutant p53). This restricts PLK1 inhibition to HaloTag-expressing cells, providing a proof-of-concept for targeted therapy.
ln Vitro
In vitro, BI2536-PEG2-Halo inhibits the proliferation of 293T cells expressing Halo-p53R273H(FL)-mCherry (p53 mutant) with an IC₅0 of 23 nM. Cells not expressing the HaloTag show much lower sensitivity (IC₅0 > 1 uM), demonstrating selective toxicity against p53-mutant cancer cells expressing the HaloTag. The compound inhibits PLK1 activity (as measured by reduced phosphorylation of PLK1 substrates such as Cdc25C and MYPT1) in HaloTag-expressing cells. The PEG2 linker provides flexibility and solubility. The compound is a research tool for validating molecular glue or targeted degradation strategies; it demonstrates that PLK1 inhibition can be selectively delivered to mutant p53-expressing cells via HaloTag conjugation.
ln Vivo
In vivo activity has not been reported; the compound is intended for cellular proof-of-concept studies. In principle, if a HaloTag-fused protein is expressed in tumors in vivo (e.g., via viral delivery or transgenic mouse), BI2536-PEG2-Halo could be used to achieve selective PLK1 inhibition in those tumors. However, this is not yet demonstrated.
Enzyme Assay
For cellular assays, 293T cells are transiently transfected with a construct encoding Halo-p53R273H(FL)-mCherry fusion protein. After 24-48 hours, cells are seeded in 96-well plates (5,000-10,000 cells/well) and treated with BI2536-PEG2-Halo (0.1 nM-10 uM) or vehicle (DMSO ≤0.1%) for 48-72 hours. Cell viability is assessed by MTT or CellTiter-Glo. IC₅0 values are calculated. For PLK1 activity, cells are treated with 50-500 nM compound for 4-24 hours, lysed in RIPA buffer, and Western blotted for p-Cdc25C (Ser216), p-MYPT1 (Thr696), and total PLK1. For apoptosis detection, Annexin V/PI staining and flow cytometry are performed. For HaloTag labeling, cells are incubated with a fluorescent HaloTag ligand (e.g., HaloTag TMR Ligand, 1-5 uM) for 30 minutes, fixed, and imaged by fluorescence microscopy to confirm HaloTag expression. For selectivity validation, control cells not expressing HaloTag are treated in parallel.
Cell Assay
Not applicable.
ADME/Pharmacokinetics
The compound is supplied as a powder soluble in DMSO (100 mg/mL). For in vitro use, prepare a 10 mM stock in DMSO. It is stable for 3 years at -20degC as powder, 6 months at -80degC in solution. No in vivo PK data are available.
Toxicity/Toxicokinetics
No toxicity data beyond cellular IC₅0. At 23 nM, the compound is non-toxic to cells lacking the HaloTag. Standard laboratory safety precautions: wear gloves, goggles, lab coat. Not for human use.
References

[1]. Sadagopan A, et al. p53 protein abundance is a therapeutic window across TP53 mutant cancers and is targetable with proximity inducing small molecules[J]. bioRxiv, 2024: 2024.07. 27.605429.

Additional Infomation
BI2536-PEG2-Halo is a chemical probe for targeted PLK1 inhibition via HaloTag anchoring. It is a research tool, not an approved drug. For research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C39H60CLN7O8
Molecular Weight
790.39
Appearance
White to off-white oil
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.2652 mL 6.3260 mL 12.6520 mL
5 mM 0.2530 mL 1.2652 mL 2.5304 mL
10 mM 0.1265 mL 0.6326 mL 1.2652 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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