yingweiwo

Aniline-PEG3-C1-Boc

Aniline-PEG3-C1-Boc (Compound D-1) is an intermediate for polymer-linked cytotoxic drugs.
Aniline-PEG3-C1-Boc
Aniline-PEG3-C1-Boc Chemical Structure CAS No.: 2115897-27-1
Product category: Drug-Linker Conjugates for ADC
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text

 

  • Business Relationship with 5000+ Clients Globally
  • Major Universities, Research Institutions, Biotech & Pharma
  • Citations by Top Journals: Nature, Cell, Science, etc.
Top Publications Citing lnvivochem Products
Product Description
Aniline-PEG3-C1-Boc (compound D-1) is an intermediate for the polymer-linked cytotoxic drugs. Aniline-PEG3-C1-Boc can be used to synthesize antibody-drug conjugates (ADCs).
Aniline-PEG3-C1-Boc (CAS 2115897-27-1) is a heterobifunctional polyethylene glycol (PEG) linker used in the synthesis of PROTACs (proteolysis-targeting chimeras) and antibody-drug conjugates (ADCs). The molecule contains an aniline group for further conjugation (e.g., to an aldehyde via reductive amination), a three-unit PEG spacer (PEG3) for increased water solubility and flexibility, and a Boc-protected primary amine (C1-Boc, where Boc is tert-butyloxycarbonyl).
Biological Activity I Assay Protocols (From Reference)
Targets
No specific biological target. This compound is a synthetic chemical linker; it does not bind to any enzyme or receptor. Its purpose is to covalently connect a target protein ligand (e.g., a kinase inhibitor) to an E3 ubiquitin ligase ligand (e.g., thalidomide analog) in a PROTAC molecule, or to link a payload to an antibody in an ADC. The PEG3 spacer reduces steric hindrance and enhances solubility.
ln Vitro
Not applicable. The linker itself has no intrinsic biological activity. The aniline group can be used to form a stable secondary amine bond with an aldehyde-containing molecule via reductive amination using sodium triacetoxyborohydride. The Boc group is acid-labile (removed by TFA) to reveal a free primary amine for amide coupling or other reactions. The PEG3 chain provides hydrophilicity and conformational flexibility.
ln Vivo
Not applicable; the linker is not intended for in vivo administration as a standalone compound. When incorporated into a PROTAC or ADC, the final conjugate's in vivo activity (e.g., tumor growth inhibition) can be tested in mouse xenograft models. The PEG3 linker length is optimized to enable the formation of a ternary complex between the target protein, the PROTAC, and the E3 ligase, leading to efficient ubiquitination and degradation of the target protein.
Enzyme Assay
Not applicable, as Aniline-PEG3-C1-Boc is a chemical reagent, not a biological test compound. Its purity and structure are verified by standard analytical methods: 1H NMR and 13C NMR (to confirm the aniline protons at delta 6.5-7.2 ppm, PEG3 methylene protons at delta 3.5-3.7 ppm, and Boc tert-butyl group at delta 1.4 ppm), high-resolution mass spectrometry (HRMS) to confirm molecular weight, and HPLC (reverse-phase C18 column, UV detection at 254 nm) to determine purity (>95%).
Cell Assay
No direct cell-based assays for the linker. To assess the functionality of the linker in a PROTAC context, researchers first conjugate the linker to both a target protein ligand and an E3 ligase ligand. The resulting PROTAC is then added to cells (e.g., HEK293T or HeLa) at concentrations ranging from 0.1 nM to 10 uM for 4-24 h. The degradation of the target protein is measured by Western blot, and the DC50 (concentration for 50% degradation) is calculated.
Animal Protocol
Not applicable for the linker alone. For in vivo efficacy studies of a PROTAC containing this linker, tumor-bearing mice (e.g., xenograft model) are administered the PROTAC via intravenous injection or oral gavage (e.g., 10-100 mg/kg, once daily or every other day) for 2-4 weeks. Tumor volumes are measured by calipers, and at study termination, tumors are excised for Western blot analysis to confirm target protein degradation.
ADME/Pharmacokinetics
Not applicable. The linker itself is not a drug. When incorporated into a PROTAC, the pharmacokinetic properties (oral bioavailability, half-life, clearance) are determined by the overall molecular weight, lipophilicity, and polarity of the final conjugate. The PEG3 linker generally improves aqueous solubility and reduces plasma protein binding compared to more lipophilic alkyl linkers.
Toxicity/Toxicokinetics
No toxicity data for the linker itself. The PEG3 moiety is considered biocompatible and non-toxic. Aniline and Boc groups are typical in organic synthesis but are not intended for human consumption. Standard laboratory safety precautions (gloves, lab coat, fume hood) should be used when handling this chemical. It may cause skin and eye irritation.
References

[1]. Antibody-drug conjugate targeting CD73 and preparation method and application thereof. China, CN110575548A.

Additional Infomation
Aniline-PEG3-C1-Boc is a research-grade PROTAC linker, not a drug. It has no FDA approval. This type of linker is widely used in the synthesis of PROTACs, a novel class of heterobifunctional molecules that induce targeted protein degradation. The PEG3 spacer provides optimal length and flexibility for many protein degradation applications. Boc-protected amines are common building blocks for peptide and PROTAC synthesis.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C18H29NO6
Molecular Weight
355.43
CAS #
2115897-27-1
Appearance
Liquid
Density
1.111±0.06 g/cm3(Temp: 20 °C; Press: 760 Torr)(predicted)
Boiling Point
477.5±40.0 °C(predicted)
LogP
0
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~350 mg/mL (~984.72 mM; with ultrasonication)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
View More

Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
View More

Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.8135 mL 14.0675 mL 28.1349 mL
5 mM 0.5627 mL 2.8135 mL 5.6270 mL
10 mM 0.2813 mL 1.4067 mL 2.8135 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us