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Glucocorticoid receptor agonist-3 Ala-Ala-Mal

Cat No.:V85441 Purity: ≥98%
Glucocorticoid receptor agonist-3 Ala-Ala-Mal
Glucocorticoid receptor agonist-3 Ala-Ala-Mal Chemical Structure CAS No.: 3014393-35-9
Product category: Drug-Linker Conjugates for ADC
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes
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Product Description
Glucocorticoid receptor agonist-3 Ala-Ala-Mal (Compound Preparation 8) is an anti-human TNFα antibody-glucocorticoid receptor agonist (GC) conjugate. Glucocorticoid receptor agonist-3 Ala-Ala-Mal can be used in the study of autoimmune and inflammatory diseases.
Glucocorticoid receptor agonist-3 Ala-Ala-Mal (CAS 3014393-35-9, Compound Preparation 8) is a drug-antibody conjugate consisting of an anti-human TNFα antibody linked to a glucocorticoid receptor agonist payload. It has a molecular formula of C49H55FN4O12 and a molecular weight of 910.98 g/mol. This conjugate is designed as a targeted therapeutic for autoimmune and inflammatory diseases, combining the anti-inflammatory properties of glucocorticoids with the specificity of antibody-mediated delivery to sites of TNFα expression. The Ala-Ala-Mal linker system enables controlled release of the glucocorticoid agonist payload at the target site.
Biological Activity I Assay Protocols (From Reference)
Targets
Glucocorticoid receptor agonist-3 Ala-Ala-Mal targets two distinct entities: the glucocorticoid receptor (GR) via its agonist payload and TNFα via the anti-human TNFα antibody component. The glucocorticoid receptor is a nuclear receptor that, upon activation by glucocorticoids, translocates to the nucleus and modulates the transcription of anti-inflammatory genes while repressing pro-inflammatory gene expression. TNFα is a pro-inflammatory cytokine that plays a central role in the pathogenesis of autoimmune and inflammatory diseases.
ln Vitro
As an antibody-drug conjugate, the in vitro activity of Glucocorticoid receptor agonist-3 Ala-Ala-Mal is characterized by its ability to bind to TNFα-expressing cells and deliver the glucocorticoid agonist payload. The conjugate is expected to retain the glucocorticoid receptor agonist activity of the payload component, which includes potent anti-inflammatory effects through modulation of gene expression. The antibody component provides specificity for TNFα, potentially reducing systemic exposure and off-target effects compared to unconjugated glucocorticoids.
ln Vivo
In vivo activity of Glucocorticoid receptor agonist-3 Ala-Ala-Mal is being investigated in preclinical models of autoimmune and inflammatory diseases. The antibody-glucocorticoid conjugate format is designed to deliver the glucocorticoid agonist specifically to sites of TNFα expression, thereby concentrating the anti-inflammatory effect at diseased tissues while minimizing systemic glucocorticoid exposure. This targeted approach has the potential to improve the therapeutic index of glucocorticoids, which are limited by significant systemic side effects when used chronically.
Enzyme Assay
Non-cell-based binding assays for Glucocorticoid receptor agonist-3 Ala-Ala-Mal typically involve measuring the affinity of the antibody component for TNFα and the binding of the glucocorticoid agonist payload to the glucocorticoid receptor. A standard protocol for TNFα binding includes ELISA or surface plasmon resonance (SPR) using immobilized TNFα protein and varying concentrations of the conjugate. Glucocorticoid receptor binding affinity can be assessed using radioligand binding assays with purified GR protein or cell lysates expressing GR. The Ala-Ala-Mal linker stability can also be evaluated in plasma or serum to assess the rate of payload release.
Cell Assay
Cellular assays for Glucocorticoid receptor agonist-3 Ala-Ala-Mal typically involve TNFα-expressing cell lines or primary immune cells. A representative protocol includes culturing cells (e.g., THP-1 monocytes or primary macrophages) in appropriate medium, treating with the conjugate at various concentrations (0.001–100 μg/mL) for 24–72 hours, and measuring downstream effects. TNFα neutralization can be assessed by measuring cytokine production (e.g., IL-6, IL-8) by ELISA. Glucocorticoid receptor activation can be confirmed by measuring the expression of glucocorticoid-responsive genes (e.g., GILZ, MKP-1) by qRT-PCR.
Animal Protocol
In vivo animal studies with Glucocorticoid receptor agonist-3 Ala-Ala-Mal are conducted in murine models of autoimmune and inflammatory diseases, such as collagen-induced arthritis, experimental autoimmune encephalomyelitis, or DSS-induced colitis. A typical protocol involves administering the conjugate via intravenous or intraperitoneal injection at doses ranging from 1 to 30 mg/kg, with treatment regimens varying from single dose to repeated dosing over several weeks. Disease severity is monitored through clinical scoring, histopathological analysis of target tissues, and measurement of inflammatory markers in serum or tissue homogenates.
ADME/Pharmacokinetics
Pharmacokinetic properties of Glucocorticoid receptor agonist-3 Ala-Ala-Mal are characteristic of antibody-drug conjugates, with a long half-life determined primarily by the antibody component. The conjugate is expected to exhibit limited distribution to peripheral tissues, with prolonged circulation and gradual accumulation at sites of TNFα expression. The Ala-Ala-Mal linker is designed for controlled release of the glucocorticoid agonist payload, which may occur through enzymatic cleavage in the target tissue or through pH-dependent mechanisms. The compound is stored as a powder at -20°C for up to 3 years.
Toxicity/Toxicokinetics
As a research compound, Glucocorticoid receptor agonist-3 Ala-Ala-Mal is not intended for human therapeutic use, and comprehensive toxicological data are limited to preclinical studies. Standard safety assessments would include cytotoxicity screening, immunogenicity testing of the antibody component, and preliminary toxicology studies in animal models to evaluate maximum tolerated dose and identify potential target organs of toxicity. The compound should be stored at -20°C in a sealed container, protected from moisture and light.
References

[1].Human tumor necrosis factor alpha antibody glucocorticoid conjugates. Patent WO2023220549A1.

Additional Infomation
Glucocorticoid receptor agonist-3 Ala-Ala-Mal (Compound Preparation 8) is referenced in patent WO2023220549A1, which describes anti-human TNFα antibody-glucocorticoid conjugates for the treatment of autoimmune and inflammatory diseases. The Ala-Ala-Mal designation indicates the specific linker-payload configuration used in this conjugate, which is designed to enable controlled release of the glucocorticoid agonist. This targeted approach represents an innovative strategy for improving the therapeutic index of glucocorticoids, which are widely used but limited by significant systemic side effects when administered systemically.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Exact Mass
910.38
CAS #
3014393-35-9
PubChem CID
169494531
Appearance
White to off-white solid powder
Density
1.42±0.1 g/cm3(Temp: 20 °C; Press: 760 Torr)(predicted)
Boiling Point
1119.2±65.0 °C(predicted)
LogP
0
Hydrogen Bond Donor Count
5
Hydrogen Bond Acceptor Count
13
Rotatable Bond Count
14
Heavy Atom Count
66
Complexity
2060
Defined Atom Stereocenter Count
11
SMILES
CC1=C(C(=C(C=C1)OCC2=CC(=CC=C2)NC(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)CCN3C(=O)C=CC3=O)F)[C@H]4O[C@@H]5C[C@H]6[C@@H]7CCC8=CC(=O)C=C[C@@]8([C@H]7[C@H](C[C@@]6([C@@]5(O4)C(=O)CO)C)O)C
InChi Key
BISHTACTVXELTJ-VFAPTOKSSA-N
InChi Code
InChI=1S/C49H55FN4O12/c1-25-9-12-35(64-24-28-7-6-8-30(19-28)53-45(63)27(3)52-44(62)26(2)51-38(59)16-18-54-39(60)13-14-40(54)61)43(50)41(25)46-65-37-21-33-32-11-10-29-20-31(56)15-17-47(29,4)42(32)34(57)22-48(33,5)49(37,66-46)36(58)23-55/h6-9,12-15,17,19-20,26-27,32-34,37,42,46,55,57H,10-11,16,18,21-24H2,1-5H3,(H,51,59)(H,52,62)(H,53,63)/t26-,27-,32-,33-,34-,37+,42+,46-,47-,48-,49+/m0/s1
Chemical Name
(2S)-2-[3-(2,5-dioxopyrrol-1-yl)propanoylamino]-N-[(2S)-1-[3-[[2-fluoro-3-[(1S,2S,4R,6S,8S,9S,11S,12S,13R)-11-hydroxy-8-(2-hydroxyacetyl)-9,13-dimethyl-16-oxo-5,7-dioxapentacyclo[10.8.0.02,9.04,8.013,18]icosa-14,17-dien-6-yl]-4-methylphenoxy]methyl]anilino]-1-oxopropan-2-yl]propanamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO :~100 mg/mL (~109.77 mM; with sonication)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
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Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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