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PELI1-IN-1

Cat No.:V85283 Purity: ≥98%
PELI1-IN-1
PELI1-IN-1 Chemical Structure Product category: E1 E2 E3 Enzyme
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
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Product Description
PELI1-IN-1 (compound 3d) is a potent inhibitor of PELI1, an E3 ubiquitin ligase. PELI1-IN-1 has anti-tumor effects.
PELI1-IN-1 (compound 3d) is a potent, resveratrol-derived small-molecule inhibitor of Pellino-1 (PELI1), an E3 ubiquitin ligase implicated in oncogenic signaling and inflammation. It has a molecular formula of C20H16O4 and a molecular weight of 320.3 g/mol. The compound was identified through medicinal chemistry optimization of the natural stilbene scaffold, delivering a ~15-fold affinity gain (Kd = 8.2 μM vs. 125.3 μM for resveratrol). PELI1-IN-1 selectively inhibits triple-negative breast cancer (TNBC) cell migration without cytotoxicity.
Biological Activity I Assay Protocols (From Reference)
Targets
PELI1-IN-1 targets Pellino-1 (PELI1), an E3 ubiquitin ligase that functions through both its catalytic RING domain and its phosphoprotein-binding FHA domain. The compound is a structurally optimized resveratrol derivative that binds to the FHA domain of PELI1, disrupting the PELI1–SNAIL/SLUG interaction. By inhibiting PELI1, the compound modulates oncogenic signaling and inflammation pathways involved in cancer metastasis.
ln Vitro
PELI1-IN-1 shows potent in vitro activity as a PELI1 inhibitor with a binding affinity (Kd) of 8.2 μM for the FHA domain, representing a ~15-fold improvement over resveratrol. The compound selectively inhibits TNBC cell migration (MDA-MB-231 migration reduced to 29.8% at 20 μM) without cytotoxicity. PELI1-IN-1 disrupts the PELI1–SNAIL/SLUG interaction, which is critical for cancer cell migration and metastasis.
ln Vivo
In vivo activity of PELI1-IN-1 has been demonstrated in preclinical models of triple-negative breast cancer metastasis. The compound suppresses experimental lung metastasis with no observable in vivo toxicity. This anti-metastatic activity is achieved through inhibition of PELI1-mediated signaling pathways that promote cancer cell migration and invasion.
Enzyme Assay
Non-cell-based binding assays for PELI1-IN-1 typically involve measuring the affinity of the compound for the FHA domain of PELI1. A standard protocol includes surface plasmon resonance (SPR) or fluorescence polarization (FP) using purified PELI1 FHA domain protein. The compound is incubated with the protein at various concentrations, and binding affinity (Kd) is calculated from the response data. The compound's ability to disrupt PELI1–SNAIL/SLUG interaction can be assessed using biochemical binding assays.
Cell Assay
Cellular assays for PELI1-IN-1 typically involve triple-negative breast cancer cell lines such as MDA-MB-231. A representative protocol includes culturing cells in appropriate medium, treating with PELI1-IN-1 at various concentrations (1–50 μM) for 24–72 hours, and assessing cell migration using scratch wound healing or Transwell assays. Cell viability is assessed using MTT or CellTiter-Glo assays to confirm lack of cytotoxicity.
Animal Protocol
In vivo animal studies with PELI1-IN-1 are conducted in mouse models of triple-negative breast cancer metastasis. A typical protocol involves intravenous injection of MDA-MB-231 cells to establish lung metastasis, followed by administration of PELI1-IN-1 via oral gavage or intraperitoneal injection at doses determined from pharmacokinetic studies. Lung metastasis burden is assessed by histological analysis and quantification of metastatic nodules.
ADME/Pharmacokinetics
Pharmacokinetic properties of PELI1-IN-1 have not been extensively reported in the available literature. As a small molecule with a molecular weight of 320.3 g/mol, it is expected to have reasonable oral bioavailability and tissue distribution. The compound is typically stored as a powder at -20°C for up to 3 years. Further PK studies are needed to fully characterize its absorption, distribution, metabolism, and excretion profile.
Toxicity/Toxicokinetics
As a research compound, PELI1-IN-1 is not intended for human therapeutic use, and comprehensive toxicological data are limited to preclinical studies. The compound shows no observable in vivo toxicity in preclinical models. Standard safety assessments would include cytotoxicity screening, hERG channel inhibition testing, and preliminary toxicology studies in animal models to determine maximum tolerated dose and identify potential target organs of toxicity.
References

[1].Resveratrol-derived inhibitors of the E3 ubiquitin ligase PELI1 inhibit the metastasis of triple-negative breast cancer. Eur J Med Chem. 2023 Dec 20:265:116060.

Additional Infomation
PELI1-IN-1 (compound 3d) is a potent, resveratrol-derived inhibitor of the E3 ubiquitin ligase PELI1, optimized for direct FHA-domain binding. The compound selectively inhibits TNBC cell migration without cytotoxicity and suppresses experimental lung metastasis with no observable in vivo toxicity. PELI1-IN-1 is referenced in the primary literature (European Journal of Medicinal Chemistry, 2023) for its anti-metastatic activity in triple-negative breast cancer.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H16O4
Molecular Weight
320.34
Appearance
Off-white to light yellow solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
Typically soluble in DMSO (e.g. 10 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.1217 mL 15.6084 mL 31.2168 mL
5 mM 0.6243 mL 3.1217 mL 6.2434 mL
10 mM 0.3122 mL 1.5608 mL 3.1217 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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