| Size | Price | |
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| Other Sizes |
| Targets |
PEGs
As a PEG-based PROTAC linker, Acid-PEG2-ethyl propionate does not have a specific biological target itself but serves as a structural component in PROTAC molecules. The PEG category of linkers is used to connect the E3 ubiquitin ligase ligand to the target protein ligand in PROTAC design. The carboxylic acid group allows for conjugation to primary amines via amide bond formation. The ethyl ester can be hydrolyzed to reveal a carboxylic acid for further functionalization. |
|---|---|
| ln Vitro |
One ligand is for an E3 ubiquitin ligase, and the other is for the target protein; these two ligands are joined by a linker to form PROTACs. The intracellular ubiquitin-proteasome system is utilized by PROTACs to specifically destroy target proteins[1].
Acid-PEG2-ethyl propionate functions as a linker component in in vitro PROTAC synthesis and bioconjugation applications. The carboxylic acid group allows for efficient conjugation to primary amines via amide bond formation. The ethyl ester can be hydrolyzed to reveal a carboxylic acid for further functionalization. The PEG2 spacer provides water solubility and molecular flexibility. In vitro studies typically involve conjugation of this linker to various ligands to evaluate its effectiveness in facilitating protein degradation. |
| ln Vivo |
In vivo activity data for Acid-PEG2-ethyl propionate as a standalone compound are not reported, as it is utilized as a synthetic linker rather than as a therapeutic agent. The in vivo efficacy of PROTAC molecules incorporating this PEG2 linker would depend on the specific target protein ligand and the overall pharmacokinetic properties of the complete PROTAC construct.
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| Enzyme Assay |
In vitro enzyme/receptor binding assays for Acid-PEG2-ethyl propionate typically involve conjugation studies rather than direct binding measurements. The carboxylic acid group can be activated for conjugation to primary amines, and conjugation efficiency can be assessed by techniques such as NMR spectroscopy, mass spectrometry, or HPLC. Surface plasmon resonance (SPR) may be employed to evaluate the binding of PROTAC molecules containing this linker to their targets.
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| Cell Assay |
In vitro cell-based assays using Acid-PEG2-ethyl propionate typically involve its incorporation into PROTAC molecules, followed by evaluation in cell culture systems. Cells are treated with PROTACs containing this PEG2 linker, and target protein degradation is measured by Western blotting or immunofluorescence. Dose-response experiments are performed to determine optimal concentrations for degradation studies. The PEG2 chain provides water solubility, facilitating compound handling and delivery in cell culture media.
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| Animal Protocol |
In vivo animal studies using Acid-PEG2-ethyl propionate are conducted as part of the evaluation of complete PROTAC molecules that incorporate this PEG2 linker. Typical protocols involve administering PROTAC constructs to animal models, followed by assessment of pharmacokinetics, biodistribution, or efficacy. The PEG2 spacer is expected to improve the pharmacokinetic profile by increasing hydrophilicity.
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| ADME/Pharmacokinetics |
As a linker rather than a therapeutic drug, comprehensive pharmacokinetic data for Acid-PEG2-ethyl propionate alone are not available. The compound has a molecular formula of C10H18O6 and a molecular weight of 234.24. It has a purity of ≥97%. The IUPAC name is 3-[2-(3-ethoxy-3-oxopropoxy)ethoxy]propanoic acid. It is a PEG-based PROTAC linker that can be used in the synthesis of PROTACs.
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| Toxicity/Toxicokinetics |
The toxicity profile of Acid-PEG2-ethyl propionate as an individual compound is not extensively characterized, as it is primarily used as a research reagent and synthetic linker. The compound is intended for research use only and is not approved for therapeutic use in humans. Standard laboratory safety practices, including the use of personal protective equipment, are recommended.
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| References | |
| Additional Infomation |
Acid-PEG2-ethyl propionate (CAS 886362-90-9) has a molecular formula of C10H18O6 and a molecular weight of 234.24. It is a PEG-based PROTAC linker that can be used in the synthesis of PROTACs. The compound features a carboxylic acid group and an ethyl ester connected by a PEG2 spacer. It is part of the PEG category of PROTAC linkers.
|
| Molecular Formula |
C10H18O6
|
|---|---|
| Molecular Weight |
234.25
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| Exact Mass |
234.11
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| CAS # |
886362-90-9
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| PubChem CID |
40425247
|
| Appearance |
Colorless to light yellow liquid
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| Density |
1.145g/cm3
|
| Boiling Point |
370.8ºC at 760 mmHg
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| Flash Point |
139.5ºC
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| Index of Refraction |
1.452
|
| LogP |
0.447
|
| Hydrogen Bond Donor Count |
1
|
| Hydrogen Bond Acceptor Count |
6
|
| Rotatable Bond Count |
11
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| Heavy Atom Count |
16
|
| Complexity |
204
|
| Defined Atom Stereocenter Count |
0
|
| SMILES |
CCOC(=O)CCOCCOCCC(=O)O
|
| InChi Key |
KEGUKRRJONEXNN-UHFFFAOYSA-N
|
| InChi Code |
InChI=1S/C10H18O6/c1-2-16-10(13)4-6-15-8-7-14-5-3-9(11)12/h2-8H2,1H3,(H,11,12)
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| Chemical Name |
3-[2-(3-ethoxy-3-oxopropoxy)ethoxy]propanoic acid
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| HS Tariff Code |
2934.99.9001
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| Storage |
Powder -20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
| Shipping Condition |
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
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| Solubility (In Vitro) |
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
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|---|---|
| Solubility (In Vivo) |
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.
Injection Formulations
Injection Formulation 1: DMSO : Tween 80： Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution → 50 μL Tween 80 → 850 μL Saline)(e.g. IP/IV/IM/SC) *Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution. Injection Formulation 2: DMSO : PEG300 ：Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline) Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO → 900 μL Corn oil) Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals). View More
Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO → 900 μL (20% SBE-β-CD in saline)] Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium) Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals). View More
Oral Formulation 3: Dissolved in PEG400 (Please use freshly prepared in vivo formulations for optimal results.) |
| Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
| 1 mM | 4.2689 mL | 21.3447 mL | 42.6894 mL | |
| 5 mM | 0.8538 mL | 4.2689 mL | 8.5379 mL | |
| 10 mM | 0.4269 mL | 2.1345 mL | 4.2689 mL |
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.
Calculation results
Working concentration： mg/mL；
Method for preparing DMSO stock solution： mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.
Method for preparing in vivo formulation:：Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O，mix and clarify.
(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
(2) Be sure to add the solvent(s) in order.
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