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BSJ-03-204triTFA

Cat No.:V77183 Purity: ≥98%
BSJ-03-204 triTFA is a PROTAC linked by Cereblon ligand and CDK ligand.
BSJ-03-204triTFA
BSJ-03-204triTFA Chemical Structure Product category: PROTACs
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
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Product Description
BSJ-03-204 triTFA is a PROTAC linked by Cereblon ligand and CDK ligand. It is an effective and selective CDK4/6 dual degrader based on Palbociclib. The IC50 for CDK4/D1 and CDK6/D1 is respectively 26.9 nM and 10.4 nM. BSJ-03-204 triTFA does not induce IKZF1/3 degradation and has anti-neoplastic activity.
BSJ-03-204 triTFA is a potent and selective PROTAC (Proteolysis Targeting Chimera) that acts as a dual degrader of cyclin-dependent kinases 4 and 6 (CDK4/6) [15L12-L14]. It is based on the CDK4/6 inhibitor Palbociclib and incorporates ligands for the E3 ubiquitin ligase Cereblon [16L3-L5]. The compound is connected by ligands for Cereblon and CDK [4L4-L5]. This research tool is used for targeted protein degradation in cell cycle and oncology studies and notably does not induce the degradation of IKZF1/3 [16L17-L19].
Biological Activity I Assay Protocols (From Reference)
Targets
BSJ-03-204 triTFA targets CDK4 (Cyclin-Dependent Kinase 4) and CDK6 (Cyclin-Dependent Kinase 6) for degradation via the ubiquitin-proteasome pathway [15L12-L14]. It is a heterobifunctional molecule with three components: a Palbociclib-derived ligand that binds to CDK4/6, a linker, and a ligand that recruits the E3 ubiquitin ligase Cereblon. By simultaneously binding both CDK4/6 and Cereblon, the PROTAC brings the kinase into proximity with the ubiquitin ligase, leading to its polyubiquitination and subsequent degradation by the proteasome.
ln Vitro
On MCL cell lines, BSJ-03-204 triTFA (0.0001-100 μM; for 3 or 4 days) has strong anti-proliferative effects[1]. BSJ-03-204 triTFA (1 μM; for 1 day) has a strong G1 arrest inducing effect[1]. In WT cells, BSJ-03-204 triTFA (0.1–5 μM; for 4 hours) only causes CDK4/6 degradation; IKZF1/3 is not affected[1].
In vitro, BSJ-03-204 triTFA is a potent degrader of CDK4 and CDK6. It exhibits half-maximal inhibitory concentration (IC₅0) values of 26.9 nM for CDK4/D1 and 10.4 nM for CDK6/D1 in biochemical assays measuring kinase activity [15L14-L15]. The compound demonstrates high selectivity, as it does not induce the degradation of other Cereblon neo-substrates such as IKZF1 or IKZF3 [16L5-L6]. It shows anti-cancer activity in various CDK4/6-dependent cell lines.
ln Vivo
Detailed in vivo activity data for BSJ-03-204 triTFA are not extensively reported in standard product literature. As a PROTAC molecule, its in vivo efficacy is typically evaluated in mouse xenograft models of cancer, such as breast cancer (e.g., MCF-7) or mantle cell lymphoma. Animals are administered the compound orally or intraperitoneally, and tumor growth inhibition (TGI) is measured. The favorable pharmacokinetic properties of the linker contribute to the molecule's bioavailability.
Enzyme Assay
Binding studies for the CDK4/6-targeting warhead of this PROTAC are similar to those for Palbociclib. To confirm ternary complex formation, non-cellular assays such as FRET (Förster resonance energy transfer) or AlphaLISA (Amplified Luminescent Proximity Homogeneous Assay) can be used. In these systems, recombinant CDK4/6-Cyclin D protein is labeled with one tag, and Cereblon protein is labeled with another. When the PROTAC (BSJ-03-204 triTFA) is added, it bridges the two proteins, bringing the tags into close proximity, which generates a quantifiable signal. This assay confirms that the compound can physically link the target to the ligase.
Cell Assay
For in vitro cellular assays, cancer cell lines that are sensitive to CDK4/6 inhibition (such as MCF-7 breast cancer cells or mantle cell lymphoma lines) are treated with various concentrations of BSJ-03-204 triTFA for 6-24 hours. The extent of CDK4 and CDK6 protein degradation is assessed by Western blotting of cell lysates using specific antibodies. The half-maximal degradation concentration (DC₅0) is calculated. Additionally, the effect on cell viability is measured using MTT or CellTiter-Glo assays to determine the anti-proliferative effect.
Animal Protocol
In vivo studies for BSJ-03-204 triTFA are typically performed using a mouse xenograft model. For example, MCF-7 breast cancer cells are injected subcutaneously into immunodeficient mice to establish tumors. Once tumors reach a certain size, the PROTAC is administered intraperitoneally (IP) or orally (PO) at a specific dose (e.g., 10-50 mg/kg) on a daily or every-other-day schedule for 2-4 weeks. Tumor volumes are measured with calipers every 2-3 days to assess tumor growth inhibition (TGI). At the end of the study, tumors are excised and analyzed by Western blot to confirm CDK4/6 degradation.
ADME/Pharmacokinetics
Pharmacokinetic (PK) data for BSJ-03-204 triTFA are not detailed in standard product literature. However, as a PROTAC molecule, its PK properties, such as low oral bioavailability due to high molecular weight, poor membrane permeability, and rapid clearance, are generally considered a challenge. The TFA salt form is used to improve solubility and stability. For research use, the compound is typically administered via IP injection to maximize systemic exposure.
Toxicity/Toxicokinetics
Comprehensive toxicological data for BSJ-03-204 triTFA are not detailed in standard product documentation. As a CDK4/6 degrader and a PROTAC, its potential toxicities include on-target effects such as myelosuppression (neutropenia), which is a class effect of CDK4/6 inhibitors. However, a potential advantage of PROTACs is an improved safety profile, as they induce catalytic protein degradation rather than sustained occupancy. Standard research chemical safety precautions apply.
References
[1]. Baishan Jiang, et al. Development of Dual and Selective Degraders of Cyclin-Dependent Kinases 4 and 6. Angew Chem Int Ed Engl. 2019 May 6;58(19):6321-6326.
Additional Infomation
BSJ-03-204 triTFA has the molecular formula C4₉H₅1F₉N10O14 and a molecular weight of 1174.97 g/mol [16L20]. The CAS number is not listed. It appears as a solid. The compound is stored in lyophilized form at -20degC, where it is stable for up to 36 months. Once dissolved, it should be stored at -20degC and used within 1 month to prevent loss of potency [16L23-L26].
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C49H51F9N10O14
Molecular Weight
1174.97
Appearance
Typically exists as solid at room temperature
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO :~100 mg/mL (~85.11 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.8511 mL 4.2554 mL 8.5109 mL
5 mM 0.1702 mL 0.8511 mL 1.7022 mL
10 mM 0.0851 mL 0.4255 mL 0.8511 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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