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TNF-α (46-65), human TFA

Cat No.:V76404 Purity: ≥98%
TNF-α (46-65), human (TFA) is a polypeptide fragment of human TNF-α.
TNF-α (46-65), human TFA
TNF-α (46-65), human TFA Chemical Structure Product category: TNF Receptor
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of TNF-α (46-65), human TFA:

  • TNF-α (46-65), human
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Product Description
TNF-α (46-65), human (TFA) is a polypeptide fragment of human TNF-α.
TNF-alpha (46-65), human TFA is a 20-amino acid peptide fragment (residues 46 to 65) derived from the human tumor necrosis factor-alpha (TNF-alpha) protein, supplied as a TFA (trifluoroacetate) salt for enhanced solubility and stability [32L3-L6]. The peptide has a molecular formula of C112H173F3N24O32 and a molecular weight of 2424.71 [32L3-L4]. This fragment serves as a valuable research tool for studying the structure-function relationship of TNF-alpha, mapping antibody epitopes, and investigating TNF-alpha interactions with its receptors, the tumor necrosis factor receptors (TNFR1 and TNFR2).
Biological Activity I Assay Protocols (From Reference)
Targets
TNF-alpha (46-65), human TFA is a peptide fragment of the full-length TNF-alpha protein. Its intended target is not a single enzyme or receptor but rather the binding interfaces on the TNF-alpha protein itself. This fragment is derived from a specific region of the cytokine and can be used to study how TNF-alpha interacts with its receptors (TNFR1 and TNFR2), which are part of the TNF receptor family and the Apoptosis pathway [32L6-L7]. By blocking or mimicking the activity of the full-length cytokine, this peptide is a useful tool for mapping functional epitopes and exploring cytokine-receptor interactions.
ln Vitro
The peptide fragment itself is not known to possess the full functional activity (e.g., inducing apoptosis or inflammation) of the mature TNF-alpha cytokine. Instead, it is used as an analytical tool and an immunogen to study the properties of the full-length protein. In vitro activity is therefore characterized by its ability to bind to antibodies raised against this region of TNF-alpha, which can be measured using an enzyme-linked immunosorbent assay (ELISA). It can also be used in competitive binding assays to study the binding of larger, active TNF-alpha fragments or the whole cytokine to its receptor.
ln Vivo
In vivo activity data is not generally applicable to a short peptide fragment like TNF-alpha (46-65). Its primary use in a living system would be as an immunogen or an antigen to generate antibodies for research purposes. As a fragment, it is not expected to induce the robust inflammatory or apoptotic signaling characteristic of full-length TNF-alpha. The physiological effect of TNF-alpha, a proinflammatory cytokine, includes inducing necrosis or apoptosis, activating the NF-kB pathway via TNFR2, and promoting cancer growth and metastasis. However, this short peptide fragment is not used to study these effects directly.
Enzyme Assay
The binding of TNF-alpha (46-65), human TFA to its target protein is typically studied using a solid-phase binding assay, such as an enzyme-linked immunosorbent assay (ELISA). In one protocol, a known TNF-alpha antibody (that recognizes this epitope) is coated onto a 96-well ELISA plate. After blocking, the peptide is added at increasing concentrations. Bound peptide is then detected using a biotinylated secondary antibody (if the primary is not labeled) or a specific detection antibody, followed by streptavidin-HRP and a colorimetric substrate. The binding affinity of the peptide for the antibody can be determined by measuring the half-maximal effective concentration (EC50) for binding.
Cell Assay
For in vitro cellular assays, a peptide fragment such as TNF-alpha (46-65), human TFA can be used to study its effect on cultured immune cells. A typical protocol involves culturing human peripheral blood mononuclear cells (PBMCs) or specific cell lines (e.g., THP-1 monocytes). The cells are treated with various concentrations of the peptide (e.g., 0.1-100 microg/mL) for 6-24 hours. After incubation, the culture supernatant is collected, and the secretion of other cytokines (e.g., IL-6, IL-1beta) is measured by ELISA to assess any immunomodulatory effects. Alternatively, the peptide can be used to block the activity of full-length TNF-alpha by pre-incubating it with the cells before adding the cytokine.
Animal Protocol
Since TNF-alpha (46-65), human TFA is not a therapeutic drug but a research reagent, it is not typically used in in vivo animal studies as an active therapeutic agent. Its most common in vivo use would be as an immunogen to generate antibodies. A standard protocol for this involves emulsifying 50-200 microg of the peptide in complete Freund's adjuvant (CFA) and injecting it subcutaneously into rabbits or mice. This is followed by 2-3 booster injections in incomplete Freund's adjuvant (IFA) at 2-3 week intervals. Serum is collected from the animals to isolate polyclonal antibodies against the TNF-alpha (46-65) epitope, which can then be used in various assays.
ADME/Pharmacokinetics
The pharmacokinetic properties of TNF-alpha (46-65), human TFA are not relevant to its use as a research peptide. It is not intended for use as a therapeutic agent, and its absorption, distribution, metabolism, and excretion (ADME) are not typically characterized. As a short peptide, it is likely to be rapidly degraded in vivo by proteases if it were to be administered. Its utility lies in its use as a soluble research tool. The TFA salt form is used to enhance the solubility and stability of the peptide in aqueous buffers for laboratory handling, facilitating its use in immunological and biochemical assays.
Toxicity/Toxicokinetics
Specific toxicity data for TNF-alpha (46-65), human TFA is not available. As a short peptide fragment of a human cytokine, it is generally considered to have low toxicity at the concentrations used in laboratory research (e.g., microg to mg/mL). However, as with all research chemicals, standard laboratory safety practices should be followed, including the use of gloves and a lab coat to avoid skin contact or inhalation. The peptide is strictly for research use only and is not intended for human or clinical use. It should be stored as a powder at -80degC for long-term stability [32L8].
Additional Infomation
TNF-alpha (46-65), human TFA (TFA salt) is a peptide fragment of human TNF-alpha. It is a valuable research tool for the biochemical, immunological, and therapeutic research of cytokine functions. The TFA salt form improves its solubility and stability. The peptide is derived from a region of the TNF-alpha protein that is important for receptor binding, making it a useful tool for studying cytokine-receptor interactions. This peptide is strictly for research use only. It is not a therapeutic drug, has not been approved by the FDA, and is not intended for clinical use. It is typically stored as a dry powder at -80degC to ensure its long-term stability and prevent degradation [32L8].
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C112H173F3N24O32
Molecular Weight
2424.71
Related CAS #
TNF-α (46-65), human;144796-72-5
Appearance
Solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.4124 mL 2.0621 mL 4.1242 mL
5 mM 0.0825 mL 0.4124 mL 0.8248 mL
10 mM 0.0412 mL 0.2062 mL 0.4124 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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