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4,10-Dioxatri cyclo[5.2. 1.02.6]dec-8-ene-3,5-dione (7-Oxanorborna-2-ene-5,6-dicarboxylic anhydride)

Cat No.:V75907 Purity: ≥98%
4,10-Dioxatri cyclo[5.2. 1.02.6]dec-8-ene-3,5-dione is an analogue of purine nucleoside.
4,10-Dioxatri cyclo[5.2. 1.02.6]dec-8-ene-3,5-dione (7-Oxanorborna-2-ene-5,6-dicarboxylic anhydride)
4,10-Dioxatri cyclo[5.2. 1.02.6]dec-8-ene-3,5-dione (7-Oxanorborna-2-ene-5,6-dicarboxylic anhydride) Chemical Structure CAS No.: 5426-09-5
Product category: Nucleoside Antimetabolite/Analog
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
4,10-Dioxatri cyclo[5.2. 1.02.6]dec-8-ene-3,5-dione is an analogue of purine nucleoside. Purine nucleoside analogues have broad-spectrum anticancer effect targeting indolent lymphoid malignancies. The anti-cancer mechanism in this process relies on inhibiting DNA synthesis and inducing apoptosis.
4,10-Dioxatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione (also known as 7-Oxanorborna-2-ene-5,6-dicarboxylic anhydride) is a purine nucleoside analog. It is a synthetic chemical building block with a rigid bicyclic structure. Purine nucleoside analogs are known for their broad-spectrum antitumor activity, which is the basis for its classification in biochemical research. Its anticancer mechanism is understood to involve the inhibition of DNA synthesis and the induction of apoptosis (programmed cell death).
Biological Activity I Assay Protocols (From Reference)
Targets
As a purine nucleoside analog, this compound primarily targets the DNA synthesis machinery. It is hypothesized to be incorporated into replicating DNA, where it acts as an antimetabolite. The general mechanism for this class of compounds involves competition with natural purine nucleosides, leading to the disruption of DNA replication, inhibition of cell proliferation, and the induction of cell death in rapidly dividing cells like cancer cells.
ln Vitro
In vitro, this compound is used as a research tool for studying the effects of nucleoside analogs on cell growth. It is predicted to exhibit antiproliferative activity against a range of cancer cell lines, particularly those derived from indolent lymphoid malignancies. Its specific IC50 values are not reported in the provided literature, but its activity is inferred from its classification as a purine nucleoside analog.
ln Vivo
In vivo, this compound is intended for research use. Based on its classification, it is expected to have broad antitumor activity. However, detailed in vivo efficacy data for this specific compound is not available in the provided literature. It is primarily a chemical tool or building block for synthesis rather than a well-characterized pharmacological agent in animal models.
Enzyme Assay
Cell-free assays for this compound are not described. Given its classification, an in vitro DNA polymerase assay could be used. This would involve incubating a DNA polymerase with a DNA template, a mixture of natural deoxynucleotide triphosphates (dNTPs), and the compound (likely as a triphosphate derivative). The ability of the analog to be incorporated into DNA or inhibit the enzyme would then be measured.
Cell Assay
Cellular assays for evaluating its activity would follow a standard protocol for nucleoside analogs. Cancer cell lines (e.g., lymphoma or leukemia cells) are seeded in 96-well plates and treated with serial dilutions of the compound (e.g., from 0.1 uM to 100 uM) for 48-72 hours. Cell viability is measured using an MTT or CellTiter-Glo assay to determine an IC50 value. Induction of apoptosis can be confirmed by flow cytometry using Annexin V staining.
Animal Protocol
Specific in vivo animal study protocols for this compound are not provided. A general protocol for testing antitumor activity would involve using immunocompromised mice bearing xenografts of human cancer cell lines. The compound, formulated in a suitable vehicle, would be administered intraperitoneally (IP) or orally (p.o.) at various dose levels. Tumor growth would be measured to determine its in vivo efficacy, but such data is not currently available.
ADME/Pharmacokinetics
Specific pharmacokinetic data for this compound is not available. However, as a purine nucleoside analog, its properties are likely defined by its solubility and potential for cellular uptake via nucleoside transporters. It is soluble in DMSO at ≥ 100 mg/mL, allowing for stock solution preparation. It is stable as a powder for up to 3 years at -20degC, but clinical development has not been reported.
Toxicity/Toxicokinetics
Toxicology data for this specific compound is not provided. As a purine nucleoside analog with potential DNA synthesis inhibitory activity, it could be cytotoxic to rapidly dividing cells. However, without detailed in vivo studies, its specific safety profile is not characterized. In research use, standard laboratory safety precautions (e.g., handling as a potential carcinogen) are recommended. It has no reported clinical use.
References
[1]. Robak T, Robak P. Purine nucleoside analogs in the treatment of rarer chronic lymphoid leukemias. Curr Pharm Des. 2012;18(23):3373-88.
Additional Infomation
structure
This compound is a synthetic purine nucleoside analog. One of its key features is its Diels-Alder adduct structure, which can be synthesized from maleic anhydride and furan. It is used primarily as a building block in organic synthesis or as a tool in epigenetic research. It is not a drug candidate that has advanced to clinical trials. Its value lies in its unique rigid structure, which can be used to probe the binding pockets of enzymes involved in DNA replication and repair.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C8H6O4
Molecular Weight
166.13
Exact Mass
166.026
CAS #
5426-09-5
PubChem CID
98484
Appearance
White to off-white solid powder
Density
1.5±0.1 g/cm3
Boiling Point
372.0±42.0 °C at 760 mmHg
Flash Point
172.2±27.9 °C
Vapour Pressure
0.0±0.8 mmHg at 25°C
Index of Refraction
1.584
LogP
-0.77
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
0
Heavy Atom Count
12
Complexity
278
Defined Atom Stereocenter Count
0
SMILES
O=C1OC(C2C(O3)C=CC3C21)=O
InChi Key
QQYNRBAAQFZCLF-UHFFFAOYSA-N
InChi Code
InChI=1S/C8H6O4/c9-7-5-3-1-2-4(11-3)6(5)8(10)12-7/h1-6H
Chemical Name
4,10-dioxatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 6.0194 mL 30.0969 mL 60.1938 mL
5 mM 1.2039 mL 6.0194 mL 12.0388 mL
10 mM 0.6019 mL 3.0097 mL 6.0194 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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