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C2 Ceramide (d14:1/2:0)

Cat No.:V74828 Purity: ≥98%
C2 Ceramide (d14:1/2:0) is a composition indicated for the diagnosis of diseases associated with cyclooxygenase 2 (COX2) overexpression.
C2 Ceramide (d14:1/2:0)
C2 Ceramide (d14:1/2:0) Chemical Structure CAS No.: 2097561-20-9
Product category: COX
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
Other Sizes
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Product Description
C2 Ceramide (d14:1/2:0) is a composition indicated for the diagnosis of diseases associated with cyclooxygenase 2 (COX2) overexpression. C2 Ceramide (d14:1/2:0) has strong binding activity to COX2 protein (information disclosed in patent WO2019235824A1).
C2 Ceramide (d14:1/2:0) is a bioactive sphingolipid that selectively targets cyclooxygenase-2 (COX-2). This compound exhibits a strong binding affinity to the COX-2 protein, as disclosed in patent WO2019235824A1, making it a valuable research tool for studying COX-2 overexpression. It has been investigated for use in compositions for diagnosing diseases associated with COX-2 overexpression.
Biological Activity I Assay Protocols (From Reference)
Targets
Cyclooxygenase-2 (COX-2; PTGS2). C2 Ceramide (d14:1/2:0) is a bioactive sphingolipid that selectively binds to the COX-2 protein with strong binding affinity. It is a composition for diagnosing diseases associated with COX-2 overexpression, as disclosed in patent WO2019235824A1. By selectively targeting COX-2, it may serve as a diagnostic or targeting agent.
ln Vitro
In vitro, C2 Ceramide (d14:1/2:0) exhibits a strong binding activity to the COX-2 protein (information extracted from patent WO2019235824A1). It selectively targets cyclooxygenase-2 (COX-2) and has been used in research to diagnose diseases associated with COX-2 overexpression. The binding affinity and selectivity are valuable properties for the development of diagnostic probes.
ln Vivo
In vivo, dietary administration of C2 Ceramide (d14:1/2:0) (100 uM) induces lipotoxic cardiomyopathy in Drosophila by increasing diastolic and systolic diameter, reducing fractional shortening, and decreasing the number of normal cardiac contractile events. This in vivo phenotype highlights its bioactivity and potential for modeling COX-2-related cardiac pathology. No other in vivo studies are reported.
Enzyme Assay
A direct binding ELISA or surface plasmon resonance (SPR) is used to assess COX-2 binding affinity. Recombinant human COX-2 protein is immobilized on a sensor chip or microplate. Serially diluted C2 Ceramide (d14:1/2:0) (0.1-1000 uM) is flowed over. The binding affinity (e.g., Kd) and binding kinetics (association/dissociation rates) are calculated from the sensorgram or ELISA signal. This binding assay is detailed in patent WO2019235824A1.
Cell Assay
For in vitro cellular assays, cell lines with high COX-2 expression (e.g., inflamed macrophages, certain cancer cell lines) are treated with C2 Ceramide (d14:1/2:0) (1-100 uM) for 1-4 hours. Cellular binding and uptake are assessed by fluorescence microscopy or flow cytometry if a fluorescent label is attached. COX-2 protein binding is detected by co-localization with an anti-COX-2 antibody and a secondary antibody. For diagnostic applications, cells are incubated with a labeled derivative of C2 Ceramide, and COX-2 overexpression is detected by signal intensity.
Animal Protocol
The in vivo efficacy of C2 Ceramide (d14:1/2:0) has been evaluated in Drosophila as a model for lipotoxic cardiomyopathy. Adult Drosophila are fed standard food supplemented with C2 Ceramide (d14:1/2:0) at a concentration of 100 uM. After a defined feeding period (typically several days to weeks), hearts are dissected and cardiac contractile activity is assessed by high-speed video microscopy. Diastolic and systolic diameters are measured, fractional shortening is calculated, and the number of normal contractile events is counted. This assay demonstrates the in vivo bioactivity of C2 Ceramide.
ADME/Pharmacokinetics
C2 Ceramide (d14:1/2:0) has a molecular weight of 293.44 g/mol and a formula of C16H31NO3. Its IUPAC name is (S,E)-3-hydroxy-2-((1-hydroxyethylidene)amino)octadec-4-en-1-yl acetate. It is a lipid molecule with a long fatty acid chain, making it highly lipophilic (LogP >5). Due to its lipophilicity, it is soluble in DMSO and ethanol but has low aqueous solubility. In vivo, it is administered as a dietary supplement (100 uM in food) or formulated with lipid carriers for systemic administration. Detailed PK parameters are not available.
Toxicity/Toxicokinetics
Detailed toxicological data for C2 Ceramide (d14:1/2:0) are not publicly available except for the observed cardiotoxic effect in Drosophila. At a dietary concentration of 100 uM, it induces lipotoxic cardiomyopathy in flies, characterized by increased diastolic and systolic diameters, reduced fractional shortening, and decreased normal contractile events. This suggests potential cardiotoxicity at elevated concentrations. No other toxicological endpoints have been reported.
References

[1]. Composition for diagnosing diseases associated with cox2 overexpression and screening method therefor. Patent WO2019235824A1.

Additional Infomation
N-[(1S,2R,3E)-2-hydroxy-1-(hydroxymethyl)-3-tridecen-1-yl]-acetamide is an organic molecular entity.
The compound is a composition described in patent WO2019235824A1. It is used primarily for the diagnosis of diseases associated with cyclooxygenase-2 (COX-2) overexpression. This product is a research-grade compound intended for laboratory research purposes, not for human therapeutic or diagnostic use. Further validation is required for clinical diagnostic applications.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H31NO3
Molecular Weight
285.42
Exact Mass
285.23
CAS #
2097561-20-9
PubChem CID
137700331
Appearance
Typically exists as solid at room temperature
Density
1.0±0.1 g/cm3
Boiling Point
489.9±45.0 °C at 760 mmHg
Flash Point
250.1±28.7 °C
Vapour Pressure
0.0±2.8 mmHg at 25°C
Index of Refraction
1.487
LogP
3.77
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
12
Heavy Atom Count
20
Complexity
266
Defined Atom Stereocenter Count
2
SMILES
C(N[C@@H](CO)[C@H](O)/C=C/CCCCCCCCC)(=O)C
InChi Key
CJDUQSUHEWFQMO-HMUVLFPJSA-N
InChi Code
InChI=1S/C16H31NO3/c1-3-4-5-6-7-8-9-10-11-12-16(20)15(13-18)17-14(2)19/h11-12,15-16,18,20H,3-10,13H2,1-2H3,(H,17,19)/b12-11+/t15-,16+/m0/s1
Chemical Name
N-[(E,2S,3R)-1,3-dihydroxytetradec-4-en-2-yl]acetamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5036 mL 17.5180 mL 35.0361 mL
5 mM 0.7007 mL 3.5036 mL 7.0072 mL
10 mM 0.3504 mL 1.7518 mL 3.5036 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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