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VU0364739

Cat No.:V73527 Purity: ≥98%
VU0364739 is a selective PLD2 inhibitor (IC50= 22 nM).
VU0364739
VU0364739 Chemical Structure CAS No.: 1244639-78-8
Product category: Phospholipase
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes

Other Forms of VU0364739:

  • VU0364739 HCl
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
VU0364739 is a selective PLD2 inhibitor (IC50= 22 nM). VU0364739 reduces cancer/tumor cell growth/proliferation.
VU0364739 (CAS#: 1244639-78-8) is a potent, selective, and allosteric inhibitor of the enzyme phospholipase D2 (PLD2). PLD2 is a signal transduction enzyme that hydrolyzes phosphatidylcholine to produce phosphatidic acid (PA), a key lipid second messenger. This compound is a valuable research tool for studying the specific role of the PLD2 isoform in various cellular processes.
Biological Activity I Assay Protocols (From Reference)
Targets
PLD[1]
VU0364739 selectively targets the phospholipase D2 (PLD2) isoform. It is a potent inhibitor, with a cellular IC50 of 20-22 nM, exhibiting over 75-fold selectivity over the PLD1 isoform. PLD2 is involved in a wide array of cellular functions including signal transduction, membrane trafficking, and cytoskeletal reorganization. By selectively inhibiting PLD2, this compound helps researchers dissect its unique biological roles separate from PLD1.
ln Vitro
In vitro, VU0364739 is a potent, selective, and allosteric inhibitor of phospholipase D2 (PLD2). It exhibits a cellular IC50 of 20-22 nM, with over 75-fold selectivity over PLD1. This high level of isoform selectivity makes it an ideal chemical probe. Furthermore, its activity has been shown to reduce the growth and proliferation of cancer/tumor cells, highlighting its potential in cancer research and as a tool to study the role of PLD2 in cell proliferation.
ln Vivo
In vivo activity data for VU0364739 is not detailed in the provided sources. As a potent and selective PLD2 inhibitor, it has the potential to reduce tumor growth in xenograft mouse models of cancer. Researchers would typically administer it via intraperitoneal or oral routes to animal models to study its impact on cancer progression, as well as its effects on neurological and immune functions where PLD2 is implicated.
Enzyme Assay
The inhibitory activity of VU0364739 against PLD2 can be confirmed using an in vitro PLD activity assay. Membranes from cells overexpressing human PLD2 are incubated with varying concentrations of VU0364739 (e.g., 0.1-1000 nM) in a reaction buffer containing phosphatidylcholine substrate and a detergent like Triton X-100. The reaction is allowed to proceed, and the production of phosphatidic acid (PA) is measured using a fluorescent or radiolabeled detection method. The cellular IC50 is 20-22 nM.
Cell Assay
For cell-based assays, cancer cells such as breast, lung, or ovarian cancer lines are seeded in 96-well plates. They are treated with VU0364739 at concentrations around its IC50 (e.g., 0.01-10 uM) for 48-72 hours. Cell proliferation and viability are then measured using a standard MTT or CellTiter-Glo luminescent assay. A reduction in cell viability would confirm the compound's effect on cancer cell growth. Researchers can also measure PA levels in the cell lysates using mass spectrometry as a direct pharmacodynamic readout.
Animal Protocol
In vivo efficacy studies for VU0364739 would typically be performed using a xenograft mouse model of human cancer. Mice are subcutaneously implanted with human cancer cells (e.g., lung or ovarian). When tumors reach a predetermined volume, mice are randomized and treated with VU0364739 or a vehicle control. The compound would be formulated in a suitable vehicle (e.g., 10% DMSO, 40% PEG300, 5% Tween-80, 45% saline) and administered via intraperitoneal injection at doses of 5-50 mg/kg once daily. Tumor volume is measured with calipers twice weekly to assess anti-tumor efficacy.
ADME/Pharmacokinetics
Detailed pharmacokinetic data for VU0364739 is not publicly available. The compound has a molecular weight of 446.52 g/mol. It is soluble in DMSO (200 mg/mL). For in vivo studies, a formulation using DMSO and co-solvents will be necessary. Researchers should conduct pilot PK studies to determine key parameters such as half-life, Cmax, and oral bioavailability in their specific animal model.
Toxicity/Toxicokinetics
Published toxicology data for VU0364739 is limited. In cell-based assays, it reduces cancer cell growth, which is the intended effect. The high selectivity for PLD2 over PLD1 is expected to minimize off-target toxicity, as PLD1 is thought to mediate many of the redundant or housekeeping functions of the PLD family. Standard safety precautions for handling research chemicals should be followed.
References

[1]. Design, synthesis, and biological evaluation of halogenated N-(2-(4-oxo-1-phenyl-1,3,8-triazaspiro[4.5]decan-8-yl)ethyl)benzamides: discovery of an isoform-selective small molecule phospholipase D2 inhibitor. J Med Chem. 2010 Sep 23;53(18):6706-19.

Additional Infomation
VU0364739 is a research-grade compound and is not approved for clinical use. It is a best-in-class chemical probe for studying the specific biological functions of the PLD2 isoform in a wide range of fields, including cancer biology, immunology, and neurobiology. The compound should be stored as a powder at -20degC, protected from light and moisture. For research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H27FN4O2
Molecular Weight
446.52
Exact Mass
446.212
CAS #
1244639-78-8
Related CAS #
VU 0364739 hydrochloride;1244640-48-9
PubChem CID
46937439
Appearance
Off-white to light yellow solid powder
LogP
3.859
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
5
Heavy Atom Count
33
Complexity
710
Defined Atom Stereocenter Count
0
SMILES
C1CN(CCC12C(=O)NCN2C3=CC(=CC=C3)F)CCNC(=O)C4=CC5=CC=CC=C5C=C4
InChi Key
MSTXJJGAXXJCBY-UHFFFAOYSA-N
InChi Code
InChI=1S/C26H27FN4O2/c27-22-6-3-7-23(17-22)31-18-29-25(33)26(31)10-13-30(14-11-26)15-12-28-24(32)21-9-8-19-4-1-2-5-20(19)16-21/h1-9,16-17H,10-15,18H2,(H,28,32)(H,29,33)
Chemical Name
N-[2-[1-(3-fluorophenyl)-4-oxo-1,3,8-triazaspiro[4.5]decan-8-yl]ethyl]naphthalene-2-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 200 mg/mL (447.91 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2395 mL 11.1977 mL 22.3954 mL
5 mM 0.4479 mL 2.2395 mL 4.4791 mL
10 mM 0.2240 mL 1.1198 mL 2.2395 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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