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Enzyme-IN-1

Cat No.:V73368 Purity: ≥98%
Enzyme-IN-1 (compound 1) is a bioactive peptide-based N-terminal nucleophile (Ntn) hydrolase inhibitor.
Enzyme-IN-1
Enzyme-IN-1 Chemical Structure CAS No.: 868540-02-7
Product category: Proteasome
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes
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Product Description
Enzyme-IN-1 (compound 1) is a bioactive peptide-based N-terminal nucleophile (Ntn) hydrolase inhibitor. Specifically, Enzyme-IN-1 inhibits the chymotrypsin-like activity (CT-L) of the 20S proteasome. Enzyme-IN-1 may have potential anti-inflammatory activities.
Enzyme-IN-1 (compound 1) is a peptide-based inhibitor of N-terminal nucleophile (Ntn) hydrolases. It specifically inhibits the chymotrypsin-like activity (CT-L) of the 20S proteasome. It has potential anti-inflammatory properties and is used as a research tool to study proteasome function and inflammatory pathways.
Biological Activity I Assay Protocols (From Reference)
Targets
20S proteasome (chymotrypsin-like activity, CT-L). Enzyme-IN-1 is a peptide-based N-terminal nucleophile (Ntn) hydrolase inhibitor that specifically targets the CT-L activity of the proteasome.
ln Vitro
Enzyme-IN-1 (compound 1) selectively inhibits the chymotrypsin-like (CT-L) activity of the 20S proteasome. Its peptide-based structure allows it to interact with the catalytic N-terminal threonine residues of the proteasome beta-subunits. It may possess potential anti-inflammatory properties based on preliminary studies.
ln Vivo
In vivo activity data for Enzyme-IN-1 are limited. As a proteasome inhibitor, it may have potential applications in models of inflammation and cancer where proteasome inhibition is beneficial. Further in vivo studies are needed to characterize its efficacy, pharmacokinetics, and anti-inflammatory effects in animal models.
Enzyme Assay
For non-cellular assays, purified 20S proteasome is incubated in assay buffer (50 mM Tris-HCl pH 7.5, 1 mM DTT, 5 mM MgCl2) with a fluorogenic substrate for CT-L activity, such as Suc-LLVY-AMC. Enzyme-IN-1 is added at varying concentrations (0.1-100 microM). After incubation at 37degC for 30-60 min, AMC fluorescence is measured (excitation 380 nm, emission 460 nm) to calculate IC50.
Cell Assay
For cell-based assays, cells (e.g., immune cells or cancer cell lines) are treated with Enzyme-IN-1 (0.1-50 microM) for 4-24 hours. Cells are then lysed, and proteasome CT-L activity in lysates is measured using Suc-LLVY-AMC. Cell viability is assessed by MTT or CCK-8, and inflammatory markers (e.g., NF-kappaB activation, cytokine production) may be evaluated.
Animal Protocol
Enzyme-IN-1 is typically administered intraperitoneally or orally in rodent models. Formulations may use DMSO/PEG300/Tween-80/saline. Tissues (e.g., liver, spleen, or target organs) are collected post-treatment, and proteasome CT-L activity in tissue lysates is measured ex vivo using fluorogenic substrates. Efficacy in inflammatory models may be evaluated.
ADME/Pharmacokinetics
Enzyme-IN-1 is a peptide-based compound with moderate stability. For in vitro use, it is typically dissolved in DMSO to prepare stock solutions (10-50 mM). Detailed pharmacokinetic parameters (half-life, bioavailability, tissue distribution) have not been extensively reported. It is intended for research use.
Toxicity/Toxicokinetics
Toxicological data for Enzyme-IN-1 have not been extensively reported. As a proteasome inhibitor, it may exhibit some cytotoxicity at high concentrations. Standard safety precautions for handling research chemicals should be followed. It is not intended for human therapeutic use.
References

[1]. Preparation of peptides for the inhibition of enzymes. United States, US20050245435 A1. 2005-11-03.

Additional Infomation
Enzyme-IN-1 (CAS: 868540-02-7) has molecular formula C36H50N4O7 and molecular weight 650.80. It is a peptide-based proteasome inhibitor with specificity for the CT-L activity. It serves as a tool for dissecting distinct proteasome catalytic activities and investigating the role of Ntn hydrolases in inflammation and disease.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C36H50N4O7
Molecular Weight
650.80
Exact Mass
650.367
CAS #
868540-02-7
PubChem CID
11628864
Appearance
White to off-white solid powder
Density
1.177±0.06 g/cm3(Predicted)
Boiling Point
953.7±65.0 °C(Predicted)
LogP
4.3
Hydrogen Bond Donor Count
5
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
19
Heavy Atom Count
47
Complexity
1050
Defined Atom Stereocenter Count
5
SMILES
CC(C)C[C@@H](C(=O)[C@]1(CO1)C)NC(=O)[C@H](CC2=CC=CC=C2)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCC3=CC=CC=C3)NC(=O)CO
InChi Key
FPEULINZOIPWNM-VBBSPCATSA-N
InChi Code
InChI=1S/C36H50N4O7/c1-23(2)18-28(32(43)36(5)22-47-36)38-35(46)30(20-26-14-10-7-11-15-26)40-34(45)29(19-24(3)4)39-33(44)27(37-31(42)21-41)17-16-25-12-8-6-9-13-25/h6-15,23-24,27-30,41H,16-22H2,1-5H3,(H,37,42)(H,38,46)(H,39,44)(H,40,45)/t27-,28-,29-,30-,36+/m0/s1
Chemical Name
(2S)-2-[[(2S)-2-[(2-hydroxyacetyl)amino]-4-phenylbutanoyl]amino]-4-methyl-N-[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]pentanamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.5366 mL 7.6829 mL 15.3657 mL
5 mM 0.3073 mL 1.5366 mL 3.0731 mL
10 mM 0.1537 mL 0.7683 mL 1.5366 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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