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M5N36

Cat No.:V73330 Purity: ≥98%
M5N36 is a potent and specific Cdc25C inhibitor (antagonist) with IC50s of 0.15, 0.19 and 0.06 µM for Cdc25A, Cdc25B and Cdc25C respectively.
M5N36
M5N36 Chemical Structure CAS No.: 2832887-40-6
Product category: Phosphatase
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100mg
500mg
Other Sizes

Other Forms of M5N36:

  • M2N12
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
M5N36 is a potent and specific Cdc25C inhibitor (antagonist) with IC50s of 0.15, 0.19 and 0.06 µM for Cdc25A, Cdc25B and Cdc25C respectively. M5N36 showed antiproliferation activity and increased the expression of p-CDK1 and p-CDK2.
M5N36 is a potent and selective inhibitor of Cdc25 phosphatases, with particular potency against Cdc25C. Cdc25 phosphatases are key regulators of cell cycle progression that activate cyclin-dependent kinases (CDKs) by dephosphorylating inhibitory phosphorylation sites. M5N36 has been developed as a research tool for studying cell cycle regulation and has demonstrated anti-proliferative activity in multiple cancer cell lines. The compound's ability to inhibit Cdc25 phosphatases and increase the expression of phosphorylated CDK1 and CDK2 makes it valuable for cancer research.
Biological Activity I Assay Protocols (From Reference)
Targets
IC50: 0.15 µM (Cdc25A); 0.19 µM (Cdc25B); 0.06 µM (Cdc25C)[1]
M5N36 targets the Cdc25 family of dual-specificity phosphatases, including Cdc25A, Cdc25B, and Cdc25C. The compound demonstrates potent inhibitory activity against all three isoforms, with IC50 values of 0.15 µM for Cdc25A, 0.19 µM for Cdc25B, and 0.06 µM for Cdc25C. This selectivity profile, with greatest potency against Cdc25C, allows for targeted inhibition of the G2/M checkpoint. By inhibiting Cdc25 phosphatases, M5N36 prevents CDK activation and induces cell cycle arrest.
ln Vitro
In MDA-MB-231 cells, M5N36 (5, 10 µM; 24 h) promotes p-CDK1 and p-CDK2 expression [1].
In vitro, M5N36 demonstrates potent anti-proliferative activity against multiple cancer cell lines. The compound increases the expression of phosphorylated CDK1 (p-CDK1) and phosphorylated CDK2 (p-CDK2), consistent with inhibition of Cdc25 phosphatase activity and cell cycle arrest. M5N36 shows concentration-dependent inhibition of Cdc25 activity in biochemical assays and cellular models. The compound's anti-proliferative effects are observed in various cancer cell types, supporting its potential as an anticancer research tool.
ln Vivo
In vivo activity data for M5N36 are limited, as the compound is primarily studied in vitro. Based on its mechanism of Cdc25 inhibition and anti-proliferative activity, the compound is expected to inhibit tumor growth in animal models by inducing cell cycle arrest in cancer cells. However, detailed efficacy studies in animal models have not been extensively reported. The compound's potential for in vivo applications requires further investigation, including pharmacokinetic and toxicological characterization.
Enzyme Assay
The in vitro enzyme inhibition assay for M5N36 typically involves measuring the activity of recombinant human Cdc25A, Cdc25B, or Cdc25C phosphatases using a fluorogenic substrate such as 3-O-methylfluorescein phosphate (OMFP). Purified enzyme is incubated with varying concentrations of M5N36 (0.001-100 µM) in assay buffer at 37°C for 10-30 minutes. The reaction is initiated by adding the substrate, and fluorescence is measured continuously. IC50 values are calculated from dose-response curves.
Cell Assay
Cell Proliferation Assay[1]
Cell Types: Eca-109, HepG2, MCF-TAM, MDA-MB-231, Raji, SGC-7901, SW-620, HUVEC cells
Tested Concentrations:
Incubation Duration:
Experimental Results: demonstrated anti-proliferative activity with IC50s of 2.88, 3.57, 10.00, 2.00, 1.20, 6.03, 3.39, 2.40 µM for Eca-109, HepG2, MCF-TAM, MDA-MB-231, Raji, SGC-7901, SW-620, HUVEC cells, respectively.
Western Blot Analysis[1]
Cell Types: MDA-MB-231 cells
Tested Concentrations: 5, 10 µM
Incubation Duration: 24 h
Experimental Results: Increased the expression of Cdc25A, Cdc25B, increased the expression of p-CDK1 and p-CDK2.
For in vitro cell-based assays, cancer cell lines such as HeLa, MCF-7, or HCT116 are cultured in appropriate medium and treated with M5N36 at concentrations ranging from 0.1-100 µM for 24-72 hours. Cell viability is assessed using MTT or CCK-8 assays. Cell cycle analysis is performed by flow cytometry following propidium iodide staining. Cdc25 activity is measured in cell lysates using a phosphatase activity assay. p-CDK1 and p-CDK2 expression is assessed by Western blot.
Animal Protocol
In vivo animal studies for M5N36 have not been extensively reported. Based on the compound's mechanism as a Cdc25 inhibitor, potential in vivo studies would involve administration to tumor-bearing mouse models via oral gavage, intraperitoneal injection, or intravenous injection at doses ranging from 1-50 mg/kg. Tumor growth would be monitored by caliper measurements. Cell cycle markers and Cdc25 activity would be assessed in tumor tissues by immunohistochemistry and Western blot.
ADME/Pharmacokinetics
Pharmacokinetic properties of M5N36 have not been fully characterized. Molecular formula is C₂₀H₁₆ClN₅O₃. CAS number is 2832887-40-6. Detailed pharmacokinetic parameters such as bioavailability, half-life, and protein binding have not been reported. Stability in solution may be limited and fresh solutions should be prepared for each experiment. The compound should be stored under recommended conditions.
Toxicity/Toxicokinetics
Toxicology data for M5N36 are limited. As a research compound, it has not been systematically evaluated for safety. The compound's mechanism of cell cycle inhibition suggests potential cytotoxicity, which may be desirable for anticancer applications but requires careful safety assessment. Standard toxicological endpoints including cell viability, genotoxicity, and organ toxicity should be evaluated. The compound is intended for research use only and is not approved for human use.
References

[1]. Discovery of potent and selective Cdc25 phosphatase inhibitors via rapid assembly and in situ screening of Quinonoid-focused libraries. Bioorg Chem. 2021 Oct;115:105254.

Additional Infomation
M5N36 is a potent and selective inhibitor of Cdc25 phosphatases, with IC50 values of 0.15 µM (Cdc25A), 0.19 µM (Cdc25B), and 0.06 µM (Cdc25C). The compound shows greatest potency against Cdc25C and exhibits anti-proliferative activity in cancer cell lines. M5N36 increases p-CDK1 and p-CDK2 expression, consistent with Cdc25 inhibition and cell cycle arrest. It is a valuable research tool for studying cell cycle regulation and cancer biology, intended for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H16CLN5O3
Molecular Weight
409.825742721558
Exact Mass
409.094
CAS #
2832887-40-6
Related CAS #
M2N12;2376577-06-7
PubChem CID
166642624
Appearance
Orange to red solid powder
LogP
2.2
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
5
Heavy Atom Count
29
Complexity
679
Defined Atom Stereocenter Count
0
SMILES
N1C2=C(C(=O)C(Cl)=C(NC(C3=CN(C4=CC=C(CO)C=C4)N=N3)C)C2=O)C=CC=1
InChi Key
XSEYUBHGRYYOGZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C20H16ClN5O3/c1-11(15-9-26(25-24-15)13-6-4-12(10-27)5-7-13)23-18-16(21)19(28)14-3-2-8-22-17(14)20(18)29/h2-9,11,23,27H,10H2,1H3
Chemical Name
6-chloro-7-[1-[1-[4-(hydroxymethyl)phenyl]triazol-4-yl]ethylamino]quinoline-5,8-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.4400 mL 12.2002 mL 24.4004 mL
5 mM 0.4880 mL 2.4400 mL 4.8801 mL
10 mM 0.2440 mL 1.2200 mL 2.4400 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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