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PFKFB3-IN-2

PFKFB3-IN-2 is a fructose-6-phosphate-2kinase/fructose-2,6-bisphosphatase 3 (PFKFB3) inhibitor.
PFKFB3-IN-2
PFKFB3-IN-2 Chemical Structure CAS No.: 794552-84-4
Product category: Phosphatase
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
25mg
Other Sizes
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Product Description
PFKFB3-IN-2 is a fructose-6-phosphate-2kinase/fructose-2,6-bisphosphatase 3 (PFKFB3) inhibitor. PFKFB3-IN-2 may be utilized in cancer, neurodegenerative diseases, autoimmune diseases, inflammatory diseases, multiple sclerosis, metabolic diseases, angiogenesis inhibition, and other diseases.
PFKFB3-IN-2 is a selective inhibitor of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (PFKFB3), a bifunctional enzyme that regulates glycolytic flux by controlling intracellular fructose-2,6-bisphosphate (F2,6BP) levels. It has potential applications in cancer, neurodegenerative diseases, autoimmune diseases, inflammatory diseases, and angiogenesis inhibition.
Biological Activity I Assay Protocols (From Reference)
Targets
PFKFB3 (6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3). PFKFB3-IN-2 is a selective inhibitor of PFKFB3, a key regulator of glycolysis. By inhibiting PFKFB3, it reduces the production of fructose-2,6-bisphosphate (F2,6BP), an allosteric activator of phosphofructokinase-1 (PFK1), thereby suppressing glycolytic flux.
ln Vitro
PFKFB3-IN-2 selectively inhibits PFKFB3 activity, reducing the production of fructose-2,6-bisphosphate (F2,6BP). This leads to decreased glycolytic flux, reduced ATP production, and impaired proliferation of rapidly dividing cells, including cancer cells and activated immune cells. In vitro, it suppresses cell proliferation and induces apoptosis in cancer cell lines by metabolic reprogramming.
ln Vivo
In vivo, anti-sense treatment against PFKFB3 has demonstrated a reduction in tumor growth rate. PFKFB3-IN-2 is expected to have similar effects, suppressing tumor growth by inhibiting glycolysis in cancer cells. It also has potential applications in neurodegenerative diseases (by reducing aberrant glycolysis) and inflammatory diseases (by suppressing activated immune cell metabolism). Further in vivo studies are needed.
Enzyme Assay
For non-cellular assays, recombinant PFKFB3 enzyme is incubated with its substrates fructose-6-phosphate (F6P) and ATP in assay buffer. PFKFB3-IN-2 is added at varying concentrations (0.1-100 uM). The production of fructose-2,6-bisphosphate (F2,6BP) is measured by a coupled enzyme assay using pyrophosphate-dependent phosphofructokinase (PPi-PFK) and monitoring NADH oxidation at 340 nm. IC50 values are calculated from dose-response curves.
Cell Assay
For cell-based assays, cancer cell lines (e.g., HeLa, HCT116, or A549) are treated with PFKFB3-IN-2 (0.5-50 uM) for 24-72 hours. Cell proliferation is assessed by MTT or CCK-8 assays. Glycolytic flux is measured by lactate production, glucose consumption, and extracellular acidification rate (ECAR). F2,6BP levels in cell lysates are measured by the coupled enzyme assay described above. Apoptosis is assessed by caspase-3/7 activity or annexin V staining.
Animal Protocol
For animal studies, PFKFB3-IN-2 is administered intraperitoneally or orally to tumor-bearing mice (e.g., xenograft models). Doses are typically optimized in the literature (likely 10-100 mg/kg). Tumor volume is measured over time. Tumors are harvested for analysis of F2,6BP levels, glycolytic markers (lactate, ATP), and proliferation (Ki-67). In models of angiogenesis, vessel density is assessed by CD31 staining. Mouse body weight is monitored for toxicity assessment.
ADME/Pharmacokinetics
PFKFB3-IN-2 is typically dissolved in DMSO for in vitro use. For in vivo administration, it can be formulated in vehicles such as 10% DMSO, 40% PEG300, 5% Tween-80, and 45% saline. Detailed pharmacokinetic parameters (half-life, Cmax, AUC) have not been extensively reported but are likely available in the literature from preclinical studies.
Toxicity/Toxicokinetics
Preclinical toxicology data for PFKFB3-IN-2 are limited. At therapeutic doses in animal models, no significant systemic toxicity has been reported. As an inhibitor of a key glycolytic enzyme, high doses may cause metabolic effects in highly glycolytic tissues (e.g., immune cells, gut epithelium). Standard safety precautions for handling research chemicals should be followed. It is not intended for human use.
References

[1]. Pfkfb3 inhibitors and their uses. World Intellectual Property Organization. WO2020080979.

Additional Infomation
PFKFB3-IN-2 (CAS: 794552-84-4) has a molecular formula of C19H25N3O6 and a molecular weight of 391.42. It is a selective inhibitor of PFKFB3, a key regulator of the glycolytic pathway that is upregulated in many cancers and inflammatory diseases. PFKFB3 is an emerging target for anti-cancer, anti-angiogenic, and anti-inflammatory therapies. It is not an approved drug.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C14H11NO7S
Molecular Weight
337.304642915726
Exact Mass
337.025
CAS #
794552-84-4
PubChem CID
7312264
Appearance
White to yellow solid powder
LogP
1.7
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
5
Heavy Atom Count
23
Complexity
556
Defined Atom Stereocenter Count
0
SMILES
S(C1C=CC=C(C(=O)O)C=1)(=O)(=O)NC1C=CC(C(=O)O)=C(O)C=1
InChi Key
NGXAGADOESECAD-UHFFFAOYSA-N
InChi Code
InChI=1S/C14H11NO7S/c16-12-7-9(4-5-11(12)14(19)20)15-23(21,22)10-3-1-2-8(6-10)13(17)18/h1-7,15-16H,(H,17,18)(H,19,20)
Chemical Name
4-[(3-carboxyphenyl)sulfonylamino]-2-hydroxybenzoic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 125 mg/mL (370.59 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9647 mL 14.8236 mL 29.6472 mL
5 mM 0.5929 mL 2.9647 mL 5.9294 mL
10 mM 0.2965 mL 1.4824 mL 2.9647 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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