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Fitusiran (ALN-AT3SC; SAR439774)

Cat No.:V73137 Purity: ≥98%
Fitusiran (ALN-AT3SC) is a small interfering RNA that specifically targets antithrombin (AT) messenger RNA to reduce AT production in the liver.
Fitusiran (ALN-AT3SC; SAR439774)
Fitusiran (ALN-AT3SC; SAR439774) Chemical Structure CAS No.: 1499251-18-1
Product category: Small Interfering RNA (siRNA)
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes
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Product Description
Fitusiran (ALN-AT3SC) is a small interfering RNA that specifically targets antithrombin (AT) messenger RNA to reduce AT production in the liver. Fitusiran increases thrombin generation and may be utilized in the research of hemophilia.
Fitusiran (ALN-AT3SC; SAR439774) is an investigational, subcutaneously administered small interfering RNA (siRNA) therapeutic. It is designed to target antithrombin (AT) messenger RNA (mRNA) in the liver, leading to the degradation of the AT mRNA and a sustained reduction in the production of the antithrombin protein. By lowering antithrombin levels, it increases thrombin generation and improves hemostasis. Fitusiran is being developed for the treatment of hemophilia A and B, with or without inhibitors.
Biological Activity I Assay Protocols (From Reference)
Targets
Antithrombin (AT) mRNA. Fitusiran is an siRNA that specifically targets antithrombin mRNA. It recruits the RNA-induced silencing complex (RISC), which cleaves the AT mRNA, preventing its translation and leading to a sustained reduction in AT protein levels in the liver.
ln Vitro
In vitro, Fitusiran is an siRNA molecule that targets antithrombin (AT) messenger RNA. By binding to the AT mRNA, it triggers its degradation, leading to a reduction in AT protein expression in hepatocytes. This loss of antithrombin, the primary endogenous inhibitor of thrombin, shifts the hemostatic balance toward a procoagulant state, enhancing thrombin generation. The IC50 for AT mRNA knockdown is in the low nanomolar range.
ln Vivo
In vivo, Fitusiran increases thrombin generation and has been shown to improve hemostasis in mouse and non-human primate models of hemophilia. When administered subcutaneously to mice, it reduces AT activity in a dose-dependent manner. This leads to increased thrombin generation and a reduction in bleeding in models of tail-clip injury. In hemophilia patients, Fitusiran dramatically increases thrombin generation and reduces the annualized bleeding rate (ABR).
Enzyme Assay
Fitusiran is an siRNA that functions by RNA interference, not by direct enzyme inhibition. Target engagement is confirmed by measuring the reduction in antithrombin (AT) mRNA levels. A cell-free system uses a luciferase reporter assay. A plasmid containing the antithrombin 3′ untranslated region (UTR) linked to a luciferase gene is co-transfected into HEK293T cells. The cells are lysed, and the luciferase signal is measured. A decrease in luminescence indicates successful mRNA knockdown.
Cell Assay
For cellular assays, primary human hepatocytes (PHH) or hepatoma cell lines (e.g., HepG2, Huh-7) are treated with Fitusiran at concentrations of 0.1-100 nM. Cells are harvested at 24-72 hours. Antithrombin mRNA levels are measured by RT-qPCR, and antithrombin protein levels in the cell culture supernatant are measured by ELISA. A reduction in both indicates successful target engagement. For functional assays, the thrombin generation capacity of the conditioned media is measured in a thrombin generation assay (TGA) to confirm the functional consequence of AT knockdown.
Animal Protocol
In vivo studies are performed in hemophilia A and B mouse models (e.g., FVIII-/- or FIX-/- mice). Fitusiran is administered subcutaneously at doses of 1-10 mg/kg. Blood samples are collected at various time points (up to 28 days) to measure antithrombin activity (by chromogenic assay) and thrombin generation (by TGA). Efficacy is assessed using a tail-clip bleeding model. The time to hemostasis (bleeding cessation) or the reduction in blood loss is measured. Tissue sections of the liver are analyzed for antithrombin mRNA by in situ hybridization.
ADME/Pharmacokinetics
Fitusiran is administered subcutaneously. It is conjugated to a ligand for the asialoglycoprotein receptor (ASGPR) on hepatocytes, enabling efficient delivery to the liver. It has a long duration of action (half-life of 10-12 weeks in humans), supporting monthly or once-quarterly dosing. It is not metabolized by CYP enzymes. The siRNA is cleared primarily by nuclease degradation. Its PK is characterized by rapid absorption from the subcutaneous injection site into the circulation.
Toxicity/Toxicokinetics
In clinical trials, Fitusiran has demonstrated a manageable safety profile. The most common adverse events are injection site reactions (erythema, pain). Elevated liver transaminases (ALT/AST) have been observed in some patients, which is a known class effect for GalNAc-siRNA conjugates. A dose-limiting toxicity has been thrombotic events (e.g., sinus thrombosis) in patients receiving higher doses without concomitant factor replacement. Low-dose regimens with improved safety are under investigation. Fitusiran is not approved for clinical use.
References

[1]. Targeting of antithrombin in hemophilia A or B with investigational siRNA therapeutic fitusiran-Results of the phase 1 inhibitor cohort. J Thromb Haemost. 2021;19(6):1436-1446.

Additional Infomation
Fitusiran is being investigated in the clinical trial NCT02554773 (an open-label extension study of the investigational drug ALN-AT3SC in patients with moderate to severe hemophilia A or B). Fitusiran is a small interfering RNA (siRNA) that targets the human glycoprotein antithrombin (AT) and has potential coagulation activity. Following subcutaneous injection of Fitusiran, the siRNA binds to AT mRNA, potentially inhibiting AT protein translation. By inhibiting AT expression, the level of the coagulation factor thrombin increases and is activated, thereby promoting the conversion of fibrinogen to fibrin, ultimately leading to thrombus formation. This can reduce bleeding in hemophilia patients and rebalance hemostasis.
Fitusiran is a novel, first-in-class RNAi therapeutic being developed by Alnylam Pharmaceuticals and Sanofi (formerly Genzyme). It represents a paradigm shift in hemophilia treatment by rebalancing hemostasis through the inhibition of a natural anticoagulant (antithrombin), rather than replacing the missing clotting factor. This approach is applicable to both hemophilia A and B, as well as patients with inhibitors. It is not yet FDA-approved.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C78H139N11O30
Molecular Weight
1710.99398446083
Exact Mass
1709.968
CAS #
1499251-18-1
PubChem CID
119058042
Appearance
White to off-white solid powder
LogP
-5.9
Hydrogen Bond Donor Count
20
Hydrogen Bond Acceptor Count
30
Rotatable Bond Count
63
Heavy Atom Count
119
Complexity
2730
Defined Atom Stereocenter Count
17
SMILES
O1[C@H]([C@@H]([C@H]([C@H]([C@H]1CO)O)O)NC(C)=O)OCCCCC(NCCCNC(CCOCC(COCCC(NCCCNC(CCCCO[C@H]1[C@@H]([C@H]([C@H]([C@@H](CO)O1)O)O)NC(C)=O)=O)=O)(COCCC(NCCCNC(CCCCO[C@H]1[C@@H]([C@H]([C@H]([C@@H](CO)O1)O)O)NC(C)=O)=O)=O)NC(CCCCCCCCCCC(N1C[C@@H](C[C@H]1C)O)=O)=O)=O)=O
InChi Key
RUPXJRIDSUCQAN-PQNNUJSWSA-N
InChi Code
InChI=1S/C78H139N11O30/c1-50-42-54(96)43-89(50)65(104)26-12-10-8-6-5-7-9-11-25-64(103)88-78(47-111-39-27-61(100)82-33-19-30-79-58(97)22-13-16-36-114-75-66(85-51(2)93)72(108)69(105)55(44-90)117-75,48-112-40-28-62(101)83-34-20-31-80-59(98)23-14-17-37-115-76-67(86-52(3)94)73(109)70(106)56(45-91)118-76)49-113-41-29-63(102)84-35-21-32-81-60(99)24-15-18-38-116-77-68(87-53(4)95)74(110)71(107)57(46-92)119-77/h50,54-57,66-77,90-92,96,105-110H,5-49H2,1-4H3,(H,79,97)(H,80,98)(H,81,99)(H,82,100)(H,83,101)(H,84,102)(H,85,93)(H,86,94)(H,87,95)(H,88,103)/t50-,54-,55-,56-,57-,66-,67-,68-,69+,70+,71+,72-,73-,74-,75-,76-,77-/m1/s1
Chemical Name
N-[1,3-bis[3-[3-[5-[(2R,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoylamino]propylamino]-3-oxopropoxy]-2-[[3-[3-[5-[(2R,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoylamino]propylamino]-3-oxopropoxy]methyl]propan-2-yl]-12-[(2R,4R)-4-hydroxy-2-methylpyrrolidin-1-yl]-12-oxododecanamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O: 50 mg/mL
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.5845 mL 2.9223 mL 5.8446 mL
5 mM 0.1169 mL 0.5845 mL 1.1689 mL
10 mM 0.0584 mL 0.2922 mL 0.5845 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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