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Linocinnamarin

Cat No.:V72944 Purity: ≥98%
Lincinnamarin is a naturally occurring compound extracted from Fragaria ananassa Duch.
Linocinnamarin
Linocinnamarin Chemical Structure CAS No.: 554-87-0
Product category: Reactive Oxygen Species
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes
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Product Description
Lincinnamarin is a naturally occurring compound extracted from Fragaria ananassa Duch. Linocinamarin exhibits anti-inflammatory effect. Lincinnamarin inhibits antigen-stimulated increases in intracellular free Ca2+ concentration and reactive oxygen species (ROS).
Linocinnamarin (3-[4-(beta-D-Glucopyranosyloxy)phenyl]acrylic acid methyl ester) is a natural product isolated from Fragaria ananassa Duch. (strawberry). This compound exhibits anti-inflammatory activity by inhibiting antigen-stimulated degranulation, primarily through the inactivation of Syk/phospholipase Cgamma (PLCgamma) pathways. Linocinnamarin also inhibits antigen-stimulated increases in intracellular free Ca2+ concentration and reactive oxygen species (ROS). These mechanisms contribute to its anti-inflammatory and immunomodulatory effects, making it a compound of interest for research on allergic and inflammatory disorders.
Biological Activity I Assay Protocols (From Reference)
Targets
Syk kinase (Spleen Tyrosine Kinase) and Phospholipase Cgamma (PLCgamma). Linocinnamarin targets the Syk/PLCgamma signaling pathway, which is critical for antigen-stimulated degranulation in immune cells such as mast cells and basophils. By inactivating this pathway, the compound inhibits downstream signaling events including intracellular calcium mobilization and ROS generation, leading to suppression of inflammatory responses. Its primary mechanism is the direct inhibition of Syk activation.
ln Vitro
Linocinnamarin inhibits antigen-stimulated degranulation by inactivating the Syk/phospholipase Cgamma (PLCgamma) pathways. It suppresses antigen-stimulated spleen tyrosine kinase (Syk) activation, which is a key early signaling event in immune cell activation. The compound also inhibits antigen-stimulated increases in intracellular free Ca2+ concentration and ROS generation. These in vitro activities demonstrate its ability to modulate immune cell function and reduce inflammatory responses. The compound's anti-inflammatory effects are mediated through inhibition of Syk/PLCgamma signaling rather than direct neutralization of inflammatory mediators.
ln Vivo
In vivo anti-inflammatory studies have been conducted using rat hind paw inflammation models. Linocinnamarin exhibited statistically significant inhibition of hind paw inflammation at a minimally effective dose of 10 mg/kg. PK parameters and % Syk inhibition were extrapolated from rat whole blood PK/PD curve fits. These findings confirm the in vivo efficacy of Linocinnamarin as an anti-inflammatory agent and support its mechanism of action involving Syk inhibition. Further studies in other animal models of inflammation and allergic disease would be valuable.
Enzyme Assay
Sykinase inhibition assay: The in vitro activity of Linocinnamarin can be evaluated using a Syk kinase inhibition assay. Recombinant human Syk kinase is incubated with test compound at varying concentrations (0.001-100 uM) in kinase assay buffer containing ATP and a peptide substrate (e.g., poly(Glu, Tyr) peptide). Following incubation, phosphorylation of the substrate is detected by ELISA or using a fluorescence-based kinase assay kit. IC₅0 values are calculated from the concentration-response curve. Alternatively, molecular docking studies can be performed to predict binding interactions between Linocinnamarin and the Syk active site. This assay has been used to demonstrate that LN directly suppresses Ag-stimulated Syk activation in cell-free systems.
Cell Assay
For degranulation assays, cells (e.g., RBL-2H3 mast cells or human basophils) are sensitized with antigen-specific IgE overnight. Cells are washed and pre-incubated with Linocinnamarin (1-100 uM) for 30-60 minutes. Antigen stimulation is then performed for 30-60 minutes. Degranulation is quantified by measuring release of beta-hexosaminidase (enzyme activity by colorimetric substrate) or histamine (by ELISA). Intracellular Ca2+ concentration is measured using fluorescent Ca2+ indicator dyes (e.g., Fluo-4 AM). ROS generation is assessed using DCFH-DA probe. Syk phosphorylation is analyzed by Western blotting using anti-phospho-Syk antibodies. All experiments should include appropriate positive and negative controls.
Animal Protocol
Animal inflammation models: For the rat hind paw edema model, male rats are administered Linocinnamarin (oral or intraperitoneal, doses ranging from 5-50 mg/kg) 1-2 hours prior to injection of inflammatory agent (carrageenan or compound 48/80). Paw volume is measured using a plethysmometer at 0, 1, 2, 3, 4, and 6 hours post-injection. Percentage inhibition of edema is calculated compared to vehicle control group. For PK/PD studies, blood samples are collected at multiple time points after administration to determine drug concentrations and correlate with Syk inhibition in whole blood ex vivo. The minimally effective dose in this model was found to be 10 mg/kg. IL-6 and TNF-alpha levels in paw tissue or serum are measured by ELISA as secondary endpoints.
ADME/Pharmacokinetics
Linocinnamarin (MW 340.33, formula C1₆H20O₈). Solubility: soluble in DMSO (50 mg/mL). For in vivo administration, formulations using 10% DMSO + 40% PEG300 + 5% Tween 80 + 45% Saline are recommended for achieving working concentrations up to 2-5 mg/mL. Storage: Powder at -20degC (stable for 3 years). In solution at -80degC (stable for 1 year). Pharmacokinetic parameters: In rats, minimally effective dose was 10 mg/kg. PK parameters including Cmax, Tmax, half-life, and oral bioavailability have been studied in rat models and correlated with Syk inhibition using PK/PD modeling. Detailed PK data are available through research publications. The compound has a molecular weight of 679.64 for the glycoside form. However, the aglycone form is reported as C1₆H20O₈, MW 340.33. There is some discrepancy in reported molecular weights in the literature due to the glycoside structure; the biologically active form may be the aglycone.
Toxicity/Toxicokinetics
Based on its natural product origin from Fragaria ananassa (strawberry), which is widely consumed as food, Linocinnamarin is expected to have low acute toxicity at concentrations typically used for research. No significant adverse effects have been reported in animal studies at doses up to 50 mg/kg. Standard safety precautions for laboratory chemicals should be followed. Comprehensive toxicity studies including genotoxicity, reproductive toxicity, and chronic toxicity have not been extensively performed. The compound should not be used for therapeutic purposes in humans.
References

[1]. Phenolic constituents isolated from Fragaria ananassa Duch. inhibit antigen-stimulated degranulation through direct inhibition of spleen tyrosine kinase activation. Bioorg Med Chem. 2010 Aug 15;18(16):5932-7.

Additional Infomation
It has been reported that methyl 3-[4-(β-D-glucopyranosyl)phenyl]acrylate is found in plants of the genus Euphorbia hirta and flax (Linum usitatissimum), and there is relevant data available.
Linocinnamarin has been studied as a potential therapeutic agent for allergic and inflammatory conditions. The inhibition of antigen-stimulated degranulation and Syk/PLCgamma pathway suggests that Linocinnamarin may be useful for treating conditions such as asthma, allergic rhinitis, atopic dermatitis, and other mast cell-mediated disorders. The compound is not a marketed drug and is currently only available for research use. It can be used as a reference standard for natural product analysis or as a tool compound for studying Syk-dependent signaling pathways. The compound should be stored under appropriate conditions to maintain stability. Additional research is ongoing to explore its full therapeutic potential.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H20O8
Molecular Weight
340.33
Exact Mass
340.115
CAS #
554-87-0
PubChem CID
12311284
Appearance
Typically exists as solid at room temperature
Density
1.4±0.1 g/cm3
Boiling Point
591.4±50.0 °C at 760 mmHg
Flash Point
217.4±23.6 °C
Vapour Pressure
0.0±1.7 mmHg at 25°C
Index of Refraction
1.628
LogP
-0.71
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
6
Heavy Atom Count
24
Complexity
432
Defined Atom Stereocenter Count
5
SMILES
O1[C@H]([C@@H]([C@H]([C@@H]([C@H]1CO)O)O)O)OC1C=CC(/C=C/C(=O)OC)=CC=1
InChi Key
KPYQJVYNSWDFQU-ORXIWHNOSA-N
InChi Code
InChI=1S/C16H20O8/c1-22-12(18)7-4-9-2-5-10(6-3-9)23-16-15(21)14(20)13(19)11(8-17)24-16/h2-7,11,13-17,19-21H,8H2,1H3/b7-4+/t11-,13-,14+,15-,16-/m1/s1
Chemical Name
methyl (E)-3-[4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]prop-2-enoate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9383 mL 14.6916 mL 29.3832 mL
5 mM 0.5877 mL 2.9383 mL 5.8766 mL
10 mM 0.2938 mL 1.4692 mL 2.9383 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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