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PDE7-IN-2

Cat No.:V72098 Purity: ≥98%
PDE7-IN-2 (compound 2) is a potent PDE7 (phosphodiesterase 7) inhibitor (antagonist) with IC50 of 2.1 µM.
PDE7-IN-2
PDE7-IN-2 Chemical Structure CAS No.: 107522-19-0
Product category: Phosphodiesterase(PDE)
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
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Product Description
PDE7-IN-2 (compound 2) is a potent PDE7 (phosphodiesterase 7) inhibitor (antagonist) with IC50 of 2.1 µM. PDE7-IN-2 may be used for studying PD/Parkinson's disease.
PDE7-IN-2 (CAS: 107522-19-0) is a chemical compound used as a biochemical research tool. It functions as an inhibitor of the enzyme phosphodiesterase 7 (PDE7) with a reported IC50 value of 2.1 uM. This compound is primarily utilized in research focused on neurological disorders, particularly in studies related to Parkinson's disease, to investigate the role of PDE7 in cellular signaling and inflammation.
Biological Activity I Assay Protocols (From Reference)
Targets
PDE7A 2.1 μM (IC50)
PDE7-IN-2 specifically targets the phosphodiesterase 7 (PDE7) enzyme, a member of the cyclic nucleotide phosphodiesterase family. By inhibiting PDE7, it prevents the breakdown of the secondary messenger cyclic AMP (cAMP), leading to increased intracellular cAMP levels. This modulation of cAMP pathways is implicated in various physiological processes, including immune cell function and neuronal signaling, making it a target for Parkinson's disease research.
ln Vitro
In vitro, PDE7-IN-2 demonstrates potent and selective inhibition of PDE7, with a reported IC50 of 2.1 microM. This activity is typically assessed in cell-free enzymatic assays. By inhibiting PDE7, the compound is used as a tool to study the downstream effects of cAMP elevation on cellular functions such as inflammation, proliferation, and survival in cultured cells, particularly those of the immune and central nervous systems.
ln Vivo
In vivo, the activity of PDE7-IN-2 has been explored primarily in preclinical models of Parkinson's disease. As a PDE7 inhibitor, it is hypothesized to have neuroprotective and anti-inflammatory effects. While detailed published in vivo data is limited, PDE7-IN-2 is available for research into neurological disorders, with studies showing the potential for PDE7 inhibitors to modulate movement and cognitive functions in animal models through cAMP-mediated pathways.
Enzyme Assay
PDE7-IN-2 is used in non-cellular in vitro assays to determine its inhibitory potency against the PDE7 enzyme. A typical protocol involves using a purified recombinant PDE7 enzyme. The compound is dissolved in DMSO to prepare a stock solution and then diluted in an assay buffer. The enzyme is incubated with the compound and a fluorescent or radiolabeled cAMP substrate. After incubation, the reaction is stopped, and the amount of hydrolyzed product (e.g., AMP) is measured, allowing for the calculation of the half-maximal inhibitory concentration (IC50).
Cell Assay
For in vitro cellular experiments, PDE7-IN-2 is dissolved in DMSO and further diluted in cell culture medium to the desired working concentration (typically 0.1-10 uM). Cells of interest (e.g., neuronal cell lines like SH-SY5Y or microglial cells) are seeded in multi-well plates and treated with the compound. After a defined incubation period (e.g., 24-48 hours), cellular effects are assessed. These can include measuring intracellular cAMP levels, cell viability (via MTT assay), or the expression of inflammatory markers via qPCR or ELISA.
Animal Protocol
For in vivo animal studies, PDE7-IN-2 is typically administered to rodents to evaluate its effects in models of Parkinson's disease. The compound is often formulated in a vehicle such as 10% DMSO + 40% PEG300 + 5% Tween-80 + 45% saline or other suitable solvents. Administration routes may include intraperitoneal (i.p.) injection or oral gavage at specified doses. Following treatment, animals are subjected to behavioral tests (e.g., rotarod, open field) and their brains are harvested for biochemical and immunohistochemical analysis.
ADME/Pharmacokinetics
Detailed pharmacokinetic (PK) parameters for PDE7-IN-2 are not extensively published in standard commercial documentation. As a research compound, its absorption, distribution, metabolism, and excretion (ADME) profile would be expected to be studied in the context of preclinical development. For in vivo use, the compound is typically formulated in a vehicle such as 10% DMSO + 40% PEG300 + 5% Tween-80 + 45% saline to ensure adequate bioavailability.
Toxicity/Toxicokinetics
The toxicological profile of PDE7-IN-2 is not extensively detailed in public data sources. As a research chemical, it should be handled with standard laboratory precautions, including the use of personal protective equipment (PPE) such as gloves, lab coats, and safety glasses. Appropriate procedures should be followed to avoid direct contact with skin or eyes, and to prevent inhalation of dust or aerosolized particles. The compound is for research use only and not intended for human consumption.
References
[1]. García AM, wt, al. Modulation of cAMP-specific PDE without emetogenic activity: new sulfide-like PDE7 inhibitors. J Med Chem. 2014 Oct 23;57(20):8590-607.
Additional Infomation
PDE7-IN-2 is not an approved drug but is a research-only biochemical tool. It is used for laboratory research purposes to study the biological role of phosphodiesterase 7 (PDE7). Its primary application is in the study of neurological disorders, specifically Parkinson's disease, where it is used to investigate the effects of PDE7 inhibition on motor function, neuroinflammation, and neuroprotection. It is a valuable tool for target validation and drug discovery.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C14H11CLN2O3S
Molecular Weight
322.77
Exact Mass
322.018
CAS #
107522-19-0
PubChem CID
101886690
Appearance
White to light yellow solid powder
LogP
4.954
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
3
Heavy Atom Count
21
Complexity
391
Defined Atom Stereocenter Count
0
SMILES
CC(=O)NC1=CC=CC=C1SC2=C(C=CC(=C2)Cl)[N+](=O)[O-]
InChi Key
LAFNJWWMXIXPJF-UHFFFAOYSA-N
InChi Code
InChI=1S/C14H11ClN2O3S/c1-9(18)16-11-4-2-3-5-13(11)21-14-8-10(15)6-7-12(14)17(19)20/h2-8H,1H3,(H,16,18)
Chemical Name
N-[2-(5-chloro-2-nitrophenyl)sulfanylphenyl]acetamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.0982 mL 15.4909 mL 30.9818 mL
5 mM 0.6196 mL 3.0982 mL 6.1964 mL
10 mM 0.3098 mL 1.5491 mL 3.0982 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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