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Sildenafil-d3 (UK-92480-d3)

Cat No.:V72050 Purity: ≥98%
Sildenafil-d3 is deuterium-labeled sildenafil.
Sildenafil-d3 (UK-92480-d3)
Sildenafil-d3 (UK-92480-d3) Chemical Structure CAS No.: 1126745-90-1
Product category: Phosphodiesterase(PDE)
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes

Other Forms of Sildenafil-d3 (UK-92480-d3):

  • Sildenafil-d3N-1 (UK-92480-d3N-1)
  • Homo Sildenafil-d5
  • Thiosildenafil
  • Homo Sildenafil
  • Sildenafil
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Top Publications Citing lnvivochem Products
Product Description
Sildenafil-d3 is deuterium-labeled sildenafil. Sildenafil (UK-92480) is a potent phosphodiesterase 5 (PDE5) inhibitor (antagonist) with IC50 of 5.22 nM.
Sildenafil-d3 is a stable, deuterium-labeled form of sildenafil (UK-92480). In this analog, three hydrogen atoms are replaced with deuterium, a stable, non-radioactive isotope of hydrogen. This modification enhances its metabolic stability and makes it an ideal internal standard for mass spectrometry in pharmacokinetic studies.
Biological Activity I Assay Protocols (From Reference)
Targets
Sildenafil-d3 retains the same primary target as its parent compound, sildenafil, which is phosphodiesterase type 5 (PDE5). As a PDE5 inhibitor, it functions by preventing the degradation of cyclic GMP (cGMP), leading to increased blood flow. This isotopic labeling does not alter the pharmacological target of the molecule.
ln Vitro
Sildenafil itself is a potent PDE5 inhibitor with an IC50 of 5.22 nM. As a direct analog, Sildenafil-d3 is expected to have a very similar, though potentially slightly different, in vitro potency due to the kinetic isotope effect. In assays using isolated rabbit platelets or human corpus cavernosum, sildenafil has IC50 values of 3.6 and 3 nM, respectively.
ln Vivo
The in vivo activity of Sildenafil-d3 is not typically studied directly, as it is used primarily as a research tool. However, the parent compound is a well-known vasodilator used to treat erectile dysfunction and pulmonary arterial hypertension. It is expected that Sildenafil-d3 would produce similar hemodynamic effects in vivo, but its use for this purpose is generally not required.
Enzyme Assay
Sildenafil-d3 is not typically used in non-cellular enzyme assays as the test article. Instead, it is used as a stable isotope-labeled internal standard in the assay itself. A protocol would involve spiking a known amount of Sildenafil-d3 into a plasma or tissue sample before processing. It co-elutes with unlabeled sildenafil but is distinguished by mass spectrometry, allowing for precise quantification.
Cell Assay
Standard cell-based assays are not performed with Sildenafil-d3 as a treatment to study its biological effect. Instead, it is used in analytical cellular assays. In such an assay, cells would be treated with unlabeled sildenafil. After cell lysis, a fixed amount of Sildenafil-d3 is added to the sample as an internal standard to correct for matrix effects and extraction efficiency during LC-MS/MS analysis.
Animal Protocol
Sildenafil-d3 is primarily used in animal pharmacokinetic studies. An in vivo protocol involves administering unlabeled sildenafil to a mouse or rat. At various time points post-dose, blood samples are collected. A known, consistent amount of Sildenafil-d3 is then spiked into each plasma sample. This spiked sample is processed for extraction, and the concentration of unlabeled sildenafil is back-calculated by LC-MS/MS using the known concentration of the deuterated internal standard.
ADME/Pharmacokinetics
As an internal standard, the primary PK property of Sildenafil-d3 is its "mimicry" of the parent drug. It is expected to have nearly identical extraction recovery, ionization efficiency, and chromatographic retention time as unlabeled sildenafil, making it an ideal internal standard. Its higher mass (by 3 Da) due to deuterium is what allows the mass spectrometer to distinguish it from the unlabeled drug.
Toxicity/Toxicokinetics
No specific toxicology data for Sildenafil-d3 is provided, as it is used in minute quantities (sub-nanogram to microgram levels) as an internal standard, not as a therapeutic agent. The safety profile of the parent molecule, sildenafil, is well-known and clinically established. The small amount of the deuterated analog used in assays does not pose a significant risk beyond normal laboratory chemical handling.
References

[1]. The Selectivity and Potency of the New PDE5 Inhibitor TPN729MA. J Sex Med. 2013 Nov;10(11):2790-7.

[2]. Sildenafil potentiates the proliferative effect of porcine pulmonary artery smooth muscle cells induced by serotonin in vitro. Chin Med J (Engl). 2011 Sep;124(17):2733-40.

[3]. Sildenafil, a cyclic GMP phosphodiesterase inhibitor, induces microglial modulation after focal ischemia in the neonatal mouse brain. J Neuroinflammation. 2016 Apr 28;13(1):95.

[4]. The Effect of Sildenafil on Recuperation from Sciatic Nerve Injury in Rats. Balkan Med J. 2016 Mar;33(2):204-11.

Additional Infomation
Sildenafil-d3 is a highly valuable analytical tool in bioanalysis. The use of stable isotope-labeled internal standards like Sildenafil-d3 is the gold standard for quantitative mass spectrometry in drug development. It allows for highly accurate and precise measurement of drug concentrations in complex biological matrices like plasma, urine, and tissues, which is essential for calculating PK parameters like half-life and bioavailability.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H27D3N6O4S
Molecular Weight
477.59
Exact Mass
477.223
CAS #
1126745-90-1
Related CAS #
Sildenafil;139755-83-2
PubChem CID
135949537
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Boiling Point
672.4±65.0 °C at 760 mmHg
Flash Point
360.5±34.3 °C
Vapour Pressure
0.0±2.1 mmHg at 25°C
Index of Refraction
1.665
LogP
2.27
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
7
Heavy Atom Count
33
Complexity
838
Defined Atom Stereocenter Count
0
SMILES
[2H]C([2H])([2H])N1CCN(CC1)S(=O)(=O)C2=CC(=C(C=C2)OCC)C3=NC4=C(C(=O)N3)N(N=C4CCC)C
InChi Key
BNRNXUUZRGQAQC-HPRDVNIFSA-N
InChi Code
InChI=1S/C22H30N6O4S/c1-5-7-17-19-20(27(4)25-17)22(29)24-21(23-19)16-14-15(8-9-18(16)32-6-2)33(30,31)28-12-10-26(3)11-13-28/h8-9,14H,5-7,10-13H2,1-4H3,(H,23,24,29)/i3D3
Chemical Name
5-[2-ethoxy-5-[4-(trideuteriomethyl)piperazin-1-yl]sulfonylphenyl]-1-methyl-3-propyl-6H-pyrazolo[4,3-d]pyrimidin-7-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: (1). This product requires protection from light (avoid light exposure) during transportation and storage.  (2). Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 25 mg/mL (52.35 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0938 mL 10.4692 mL 20.9385 mL
5 mM 0.4188 mL 2.0938 mL 4.1877 mL
10 mM 0.2094 mL 1.0469 mL 2.0938 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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