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PDE4B-IN-2

Cat No.:V72013 Purity: ≥98%
PDE4B-IN-2 is an orally bioactive, selective PDE4B inhibitor (antagonist) with IC50 of 15 nM.
PDE4B-IN-2
PDE4B-IN-2 Chemical Structure CAS No.: 915082-52-9
Product category: Phosphodiesterase(PDE)
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
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100mg
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Product Description
PDE4B-IN-2 is an orally bioactive, selective PDE4B inhibitor (antagonist) with IC50 of 15 nM. PDE4B-IN-2 inhibits PDE4D (IC50=1.7 µM). PDE4B-IN-2 displays potent anti-inflammatory effects.
PDE4B-IN-2 (A 33) is an orally active and selective inhibitor of phosphodiesterase 4B (PDE4B). PDE4B is an enzyme that hydrolyzes cyclic AMP (cAMP), playing a key role in inflammatory signaling. PDE4B-IN-2 inhibits PDE4B with an IC50 of 15 nM. It also inhibits PDE4D with an IC50 of 1.7 µM, demonstrating selectivity for PDE4B over PDE4D. The compound exhibits potent anti-inflammatory effects. PDE4B-IN-2 is designed to selectively inhibit PDE4B, an enzyme involved in the breakdown of cAMP. It has a molecular weight of 387.89.
Biological Activity I Assay Protocols (From Reference)
Targets
PDE4B 15 nM (IC50) PDE4D 1.7 μM (IC50)
PDE4B-IN-2 targets phosphodiesterase 4B (PDE4B), a key enzyme in the cAMP signaling pathway that hydrolyzes cyclic AMP to AMP. PDE4B is involved in inflammatory signaling pathways. The compound is a selective PDE4B inhibitor with an IC50 of 15 nM. It also inhibits PDE4D with an IC50 of 1.7 µM, demonstrating selectivity for PDE4B over PDE4D. By inhibiting PDE4B, the compound increases intracellular cAMP levels, which in turn suppresses pro-inflammatory cytokine production. PDE4B-IN-2 exhibits potent anti-inflammatory effects.
ln Vitro
No CYP1A2, CYP3A4, CYP2C9, or CYP2D is inhibited by PDE4B-IN-2 (compound 33) (IC50>10 µM)[1]. LPS-induced TNF-production in vitro from mouse peripheral blood mononuclear cells (PBMC; IC50=0.5 M) is inhibited by PDE4B-IN-2[1].
PDE4B-IN-2 demonstrates potent in vitro inhibition of PDE4B with an IC50 of 15 nM. It also inhibits PDE4D with an IC50 of 1.7 µM, demonstrating selectivity for PDE4B over PDE4D. The compound exhibits potent anti-inflammatory effects in vitro. By inhibiting PDE4B, the compound increases intracellular cAMP levels, suppressing pro-inflammatory cytokine production. These in vitro findings confirm the compound's selectivity and anti-inflammatory activity, supporting its potential for treating inflammatory diseases.
ln Vivo
In mice, PDE4B-IN-2 (compound 33; 2 mg/kg; po) exhibits an AUC of 52.3 μg·h/mL and a Cmax of 8.7 μg/mL[1].
PDE4B-IN-2 is described as an orally active PDE4B inhibitor, indicating that it has sufficient oral bioavailability to exert effects in vivo. The compound exhibits potent anti-inflammatory effects, suggesting potential efficacy in animal models of inflammatory diseases. Further in vivo studies are needed to fully characterize the compound's efficacy, pharmacokinetics, and safety in animal models. PDE4B-IN-2 serves as a valuable tool for studying PDE4B-dependent inflammatory pathways and developing targeted anti-inflammatory therapies.
Enzyme Assay
The in vitro enzyme assay for PDE4B-IN-2 involves measuring its inhibition of PDE4B and PDE4D enzymatic activities. Recombinant human PDE4B and PDE4D are expressed and purified. Enzyme activity is assessed by measuring the hydrolysis of cAMP to AMP using a scintillation proximity assay or fluorescence polarization. PDE4B-IN-2 is incubated with the enzyme and substrate at various concentrations. IC50 values are determined by fitting the inhibition data to a dose-response curve. The assay buffer typically contains Tris-HCl, MgCl2, and appropriate components for enzyme activity.
Cell Assay
In vitro cellular assays for PDE4B-IN-2 typically use immune cells or cell lines to assess anti-inflammatory effects. Cells are treated with PDE4B-IN-2 at various concentrations and stimulated with pro-inflammatory stimuli such as LPS. Intracellular cAMP levels are measured using ELISA. Pro-inflammatory cytokine production (e.g., TNF-α, IL-6) is measured by ELISA or multiplex assays. The compound's ability to inhibit cytokine production is quantified. These assays confirm the compound's cellular activity and support its use in inflammatory disease research.
Animal Protocol
In vivo animal experiments for PDE4B-IN-2 would typically use animal models of inflammatory diseases, such as LPS-induced endotoxemia or models of rheumatoid arthritis. As an orally active compound, PDE4B-IN-2 would be administered via oral gavage. Inflammatory markers in serum and tissues would be measured. Disease severity in models of chronic inflammation would be assessed. Pharmacodynamic studies could evaluate target engagement and pathway modulation. The compound's anti-inflammatory effects support its potential for treating inflammatory diseases.
ADME/Pharmacokinetics
PDE4B-IN-2 is described as an orally active PDE4B inhibitor, indicating that it has sufficient oral bioavailability to exert effects in vivo. The compound has a molecular weight of 387.89, which is within the range typical for orally available small molecules. Its selectivity for PDE4B over PDE4D may influence its pharmacokinetic and pharmacodynamic profile. Further pharmacokinetic studies, including assessments of absorption, distribution, metabolism, and excretion (ADME), are necessary to fully characterize its PK profile.
Toxicity/Toxicokinetics
Toxicological data for PDE4B-IN-2 are not extensively available in the public domain. As a research compound used for studying PDE4B inhibition, PDE4B-IN-2 has not undergone extensive toxicological evaluation. Standard cytotoxicity assays in cell lines may have been performed to assess safety margins. In animal studies, tolerability and potential adverse effects would be monitored. PDE4 inhibitors are known to have potential gastrointestinal side effects; the selectivity of PDE4B-IN-2 for PDE4B may help reduce such effects. Further preclinical toxicology studies would be required before clinical development.
References

[1]. Discovery of selective PDE4B inhibitors. Bioorg Med Chem Lett. 2009 Jun 15;19(12):3174-6.

Additional Infomation
4B phosphodiesterase inhibitors
PDE4B-IN-2 (A 33) is an orally active and selective PDE4B inhibitor with an IC50 of 15 nM. It inhibits PDE4D with an IC50 of 1.7 µM, demonstrating selectivity for PDE4B. The compound exhibits potent anti-inflammatory effects. It is designed to selectively inhibit PDE4B, an enzyme involved in cAMP breakdown. PDE4B-IN-2 has a molecular weight of 387.89. No clinical trials or regulatory approvals have been reported. It is available as a research-grade compound.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C19H18CLN3O2S
Molecular Weight
387.883121967316
Exact Mass
387.08
CAS #
915082-52-9
PubChem CID
15951010
Appearance
White to off-white solid powder
LogP
5.1
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
6
Heavy Atom Count
26
Complexity
476
Defined Atom Stereocenter Count
0
SMILES
ClC1=CC=C(C2=NC(C)=C(CC)C(=N2)NC2C=CC(CC(=O)O)=CC=2)S1
InChi Key
FDVSPBLZPJMXFV-UHFFFAOYSA-N
InChi Code
InChI=1S/C19H18ClN3O2S/c1-3-14-11(2)21-19(15-8-9-16(20)26-15)23-18(14)22-13-6-4-12(5-7-13)10-17(24)25/h4-9H,3,10H2,1-2H3,(H,24,25)(H,21,22,23)
Chemical Name
2-[4-[[2-(5-chlorothiophen-2-yl)-5-ethyl-6-methylpyrimidin-4-yl]amino]phenyl]acetic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 25 mg/mL (64.45 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5781 mL 12.8906 mL 25.7812 mL
5 mM 0.5156 mL 2.5781 mL 5.1562 mL
10 mM 0.2578 mL 1.2891 mL 2.5781 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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