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SJM-3

Cat No.:V71814 Purity: ≥98%
SJM-3 is a PAM (positive allosteric modulator) of different subtypes of GABAA receptors.
SJM-3
SJM-3 Chemical Structure CAS No.: 1234977-97-9
Product category: GABA Receptor
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes
Official Supplier of:
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Product Description
SJM-3 is a PAM (positive allosteric modulator) of different subtypes of GABAA receptors. SJM-3 binds with high affinity to the α+/γ- subunit interface of the benzodiazepine binding site.
SJM-3 is a synthetic small-molecule compound that acts as both a positive allosteric modulator (PAM) of GABAA receptors and an antagonist at the high-affinity benzodiazepine binding site. It binds specifically to the high-affinity benzodiazepine binding site at the α+/γ- subunit interface of various GABAA receptor isoforms.
Biological Activity I Assay Protocols (From Reference)
Targets
GABAA receptor[1]
SJM-3 targets GABAA receptors, acting as a positive allosteric modulator of various isoforms. It binds at the high-affinity benzodiazepine binding site located at the α+/γ- subunit interface. The compound also acts as an antagonist at the benzodiazepine binding site, consistent with its PAM activity.
ln Vitro
SJM-3 binds at the α+/γ-subunit interface's high-affinity benzodiazepine binding site, but it probably uses a different location inside the transmembrane domain to carry out its activity. The displacement of [3H]-Flunitrazepam and [3H]-Ro15-1788 demonstrates the binding affinity of SJM-3 at wild type receptors and yields a Ki of 218±70 nM and 242±38 nM, respectively[1].
In cell-free receptor binding assays, SJM-3 binds to the benzodiazepine site of GABAA receptors with high affinity. The compound demonstrates activity at various GABAA receptor isoforms. Its binding at the α+/γ- subunit interface is characteristic of benzodiazepine-site ligands. Cellular electrophysiology studies demonstrate that SJM-3 acts as a positive allosteric modulator of various GABAA receptor isoforms. The compound enhances GABA-induced currents in cells expressing GABAA receptors. Its activity is mediated through binding at the benzodiazepine site.
ln Vivo
In vivo studies on SJM-3 are limited. As a GABAA receptor PAM, it may have anxiolytic, anticonvulsant, or sedative effects depending on its receptor selectivity. Detailed animal studies have not been extensively reported. The compound is primarily characterized in vitro.
Enzyme Assay
Cell-free receptor binding assays for SJM-3 are performed using membrane preparations from cells expressing various GABAA receptor isoforms. Radioligand displacement studies use [³H]flumazenil or other benzodiazepine site ligands. Membranes are incubated with varying concentrations of SJM-3 and the radioligand, followed by filtration and scintillation counting. Binding affinity is determined from competition curves.
Cell Assay
Cellular electrophysiology experiments for SJM-3 are conducted using patch-clamp recordings from cells expressing recombinant GABAA receptors. SJM-3 is applied at various concentrations, and GABA-induced currents are measured. The compound's PAM activity is assessed by its ability to potentiate GABA-evoked responses. EC50 and efficacy values are determined from concentration-response data.
ADME/Pharmacokinetics
Pharmacokinetic properties of SJM-3 have not been extensively reported. As a small-molecule GABAA receptor modulator, it is expected to be capable of crossing the blood-brain barrier. Detailed PK parameters including oral bioavailability, half-life, and tissue distribution require further characterization.
Toxicity/Toxicokinetics
Preclinical toxicity data for SJM-3 are limited. As a GABAA receptor PAM, it may have effects on the central nervous system that require careful dose selection. Comprehensive toxicological studies would be required for therapeutic development.
References

[1]. Positive modulation of synaptic and extrasynaptic GABAA receptors by an antagonist of the high affinity benzodiazepine binding site. Neuropharmacology. 2015 Aug;95:459-67.

Additional Infomation
SJM-3 is a research tool for studying GABAA receptor pharmacology. Its binding at the benzodiazepine site of various GABAA receptor isoforms makes it valuable for understanding receptor modulation. The compound's dual PAM/antagonist activity at the benzodiazepine site provides unique research applications.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C18H15FN4OS
Molecular Weight
354.40
Exact Mass
354.095
CAS #
1234977-97-9
PubChem CID
49713517
Appearance
Off-white to light yellow solid powder
Density
1.3±0.1 g/cm3
Boiling Point
568.2±60.0 °C at 760 mmHg
Flash Point
297.4±32.9 °C
Vapour Pressure
0.0±1.6 mmHg at 25°C
Index of Refraction
1.630
LogP
3.01
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
2
Heavy Atom Count
25
Complexity
496
Defined Atom Stereocenter Count
0
SMILES
CC1CCC2=C(N1C(=O)C3=CSC(=N3)C4=NC=CN=C4)C=CC(=C2)F
InChi Key
MCMRMBOJJFVNHG-UHFFFAOYSA-N
InChi Code
InChI=1S/C18H15FN4OS/c1-11-2-3-12-8-13(19)4-5-16(12)23(11)18(24)15-10-25-17(22-15)14-9-20-6-7-21-14/h4-11H,2-3H2,1H3
Chemical Name
(6-fluoro-2-methyl-3,4-dihydro-2H-quinolin-1-yl)-(2-pyrazin-2-yl-1,3-thiazol-4-yl)methanone
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 10 mg/mL (28.22 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.8217 mL 14.1084 mL 28.2167 mL
5 mM 0.5643 mL 2.8217 mL 5.6433 mL
10 mM 0.2822 mL 1.4108 mL 2.8217 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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