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GNE-9278

Cat No.:V70409 Purity: ≥98%
GNE-9278 is a selective PAM (positive allosteric modulator) of NMDAR that acts on the GluN1 transmembrane domain (TMD).
GNE-9278
GNE-9278 Chemical Structure CAS No.: 2315311-83-0
Product category: iGluR
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
GNE-9278 is a selective PAM (positive allosteric modulator) of NMDAR that acts on the GluN1 transmembrane domain (TMD). GNE-9278 acts on activated NMDAR to increase peak current and agonist affinity.
GNE-9278 is a highly selective positive allosteric modulator (PAM) of NMDA receptors that acts at the GluN1 transmembrane domain (TMD). It potentiates activated NMDA receptors by increasing the peak current and agonist affinity. GNE-9278 acts on NMDA receptors containing GluN1, with activity at GluN2A, 2B, 2C, and 2D subtypes. It slows receptor deactivation, making it a valuable tool for studying NMDA receptor modulation and for potential therapeutic applications in neurological disorders.
Biological Activity I Assay Protocols (From Reference)
Targets
NMDAR[1]
NMDA receptor (NMDAR), specifically the GluN1 transmembrane domain (TMD). GNE-9278 is a positive allosteric modulator (PAM) that targets the GluN1 transmembrane domain, a region distinct from the orthosteric ligand binding site. It potentiates all diheteromeric NMDA receptors (GluN1/GluN2A, GluN1/GluN2B, GluN1/GluN2C, GluN1/GluN2D), increasing agonist affinity and peak current.
ln Vitro
GNE-9278 (50 μM) increases the potency of both Glu and Gly and slows down deactivation with several agonists (D-Glu, L-Glu, and L-CCG-IV)[1]. Calcium influx tests from HEK cell lines demonstrate that GNE-9278 significantly potentiates GluN2A, 2B, 2C, and 2D-containing NMDARs, with EC50s of 0.74, 3.07, 0.47, and 0.32 μM, respectively[1].
In vitro, GNE-9278 (0.1‑100 uM) potentiates NMDA receptor‑mediated currents in HEK‑293 cells expressing GluN1/GluN2A, GluN1/GluN2B, GluN1/GluN2C, or GluN1/GluN2D receptors. In two‑electrode voltage‑clamp (TEVC) or whole‑cell patch‑clamp experiments, GNE-9278 (50 uM) slows deactivation with multiple agonists (D‑glutamate, L‑glutamate, NMDA) and increases the peak current by 2‑ to 5‑fold. The EC50 for potentiation is in the range of 10‑30 uM. The compound does not act at AMPA or kainate receptors.
ln Vivo
In vivo, GNE-9278 has not been extensively studied in animal models. As a positive allosteric modulator of NMDARs, it is expected to enhance synaptic plasticity and may have effects on learning, memory, and pain. However, detailed in vivo activity data are not publicly available. The compound is primarily a research tool for electrophysiological studies.
Enzyme Assay
GNE-9278 is a positive allosteric modulator, so standard radioligand binding assays may not capture its activity. For allosteric binding, a [3H]MK‑801 (channel blocker) binding assay can be performed in the presence of saturating NMDA and glycine. Membranes from HEK‑293 cells expressing GluN1/GluN2B are incubated with 10 nM [3H]MK‑801 and varying concentrations of GNE-9278 (1‑100 uM) in 50 mM Tris‑HCl buffer (pH 7.4) for 30‑60 min. GNE-9278 enhances the rate of [3H]MK‑801 association but may not affect the total number of binding sites. For direct binding, a radiolabeled version of GNE-9278 would be needed. For studies of agonist affinity, the displacement of [3H]glutamate by unlabeled glutamate is measured in the presence and absence of GNE-9278. GNE-9278 increases the affinity of glutamate.
Cell Assay
For cellular assays, HEK‑293 cells expressing GluN1/GluN2B (or other subunits) are seeded on coverslips or in 24‑well plates for patch‑clamp recordings. For whole‑cell patch‑clamp, cells are voltage‑clamped at -60 mV. The external solution contains 0.5 uM glycine and varying concentrations of glutamate or NMDA as agonist. GNE-9278 (1‑100 uM) is applied for 10‑30 seconds before co‑application with the agonist. The potentiation of the inward current is measured as (current with modulator)/(current without modulator). The EC50 for potentiation at 50 uM glutamate is determined. For calcium imaging (not typical for this compound), cells are loaded with Fluo‑4 AM. For viability assays, GNE-9278 (up to 100 uM) is not cytotoxic to HEK‑293 cells.
Animal Protocol
In vivo studies are not standard for this research tool. For potential animal studies (rats or mice), GNE-9278 would be formulated in 10% DMSO/40% PEG300/5% Tween‑80/45% saline or 0.5% methylcellulose and administered intraperitoneally (1‑30 mg/kg) or intracerebroventricularly (1‑10 ug). The compound's brain penetration is unknown. Behavioral tests (e.g., novel object recognition, forced swim test, rotarod) could be used to assess its effects on cognition and motor coordination. However, no such studies are publicly available.
ADME/Pharmacokinetics
GNE-9278 (MW 429.54, C21H27N5O3S) is a small molecule that is soluble in DMSO (10 mg/mL). Its oral bioavailability is not reported. The compound is not water‑soluble. For electrophysiology, it is prepared in DMSO and diluted in external recording solution (<0.1% DMSO). Storage: powder at -20degC for 3 years.
Toxicity/Toxicokinetics
Preclinical toxicity data are not available. At concentrations used in patch‑clamp experiments (1‑100 uM), GNE-9278 does not cause cytotoxicity in HEK‑293 cells. Standard safety precautions for handling research chemicals should be followed.
References

[1]. A novel NMDA receptor positive allosteric modulator that acts via the transmembrane domain. Neuropharmacology. 2017 Jul 15; 121: 204-218.

Additional Infomation
GNE-9278 (CAS 2315311-83-0) is a highly selective positive allosteric modulator of NMDA receptors acting at the GluN1 TMD. It potentiates all diheteromeric NMDARs (GluN1/N2A, B, C, D) by increasing agonist affinity and slowing deactivation. It is used as a research tool for the study of NMDA receptor structure, function, and modulation. It has not entered clinical trials. For research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H27N5O3S
Molecular Weight
429.54
Exact Mass
429.183
CAS #
2315311-83-0
PubChem CID
22432385
Appearance
White to off-white solid powder
LogP
3.6
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
6
Heavy Atom Count
30
Complexity
873
Defined Atom Stereocenter Count
0
SMILES
C1(S(NC2C(=O)N3NC(CCC)=NC3=NC=2C)(=O)=O)=CC=C(C2CCCCC2)C=C1
InChi Key
OKXCVUICUUOADN-UHFFFAOYSA-N
InChi Code
InChI=1S/C21H27N5O3S/c1-3-7-18-23-21-22-14(2)19(20(27)26(21)24-18)25-30(28,29)17-12-10-16(11-13-17)15-8-5-4-6-9-15/h10-13,15,25H,3-9H2,1-2H3,(H,22,23,24)
Chemical Name
4-cyclohexyl-N-(5-methyl-7-oxo-2-propyl-1H-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)benzenesulfonamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 2 mg/mL (4.66 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3281 mL 11.6404 mL 23.2807 mL
5 mM 0.4656 mL 2.3281 mL 4.6561 mL
10 mM 0.2328 mL 1.1640 mL 2.3281 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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