Size | Price | Stock | Qty |
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1mg |
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Other Sizes |
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Targets |
PI3Kα (IC50 = 15.1 nM); PI3Kβ (IC50 = 461 nM); PI3Kγ (IC50 = 110 nM); PI3Kδ (IC50 = 134 nM); mTOR (IC50 = 194 nM)
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ln Vitro |
In U-87 MG cells, SN32976 (1-100 nM; 1-hour duration) suppresses Thr308 and Ser473 pAKT expression at as low as 10 nM [1]. With EC50 values ranging from 18.5 nM in NCI-H460 cells to 1787 nM in NZM34 cells, SN32976 can effectively inhibit cell proliferation in all cell lines (cell lines are PTEN null (U-87 MG, PC3, NZM34), H1047R PIK3CA mutant (HCT116, NZM40), E545K PIK3CA mutant (NCI-H460, MCF7), and PIK3CA amplification (FaDu)).
PI3K/mTOR biochemical activity and kinase selectivity [1] SN32976, 2-((4-(4-(2-(difluoromethyl)-4-methoxy-1H-benzo[d]imidazol-1-yl)-6-morpholino-1,3,5-triazin-2-yl)piperazin-1-yl)sulfonyl)-N, N-dimethylethan-1-amine, was developed, based on an earlier scaffold, to be a potent and selective inhibitor of PI3K enzymes with favorable pharmacological properties. The design and synthesis of SN32976 will be reported elsewhere (manuscript in preparation). The biochemical potency of SN32976 against the major class I PI3K isoforms and mTOR was determined against purified recombinant protein and compared to five PI3K/mTOR inhibitors that have been clinically evaluated: ZSTK474, dactolisib, pictilisib, buparlisib and omipalisib (Table 1). SN32976 is a potent inhibitor of class I PI3K enzymes and mTOR with similar activity to PI3Kα, β, γ and mTOR to that of ZSTK474, dactolisib, pictilisib and buparlisib, but less potency than omipalisib. Of particular interest, however, was the relative sparing of SN32976 to PI3Kδ and selectivity for PI3Kα. SN32976 had an IC50 of 15.1 ± 4.3 nM against PI3Kα and showed 7.3-fold, 8.9-fold, 13-fold and 30-fold selectivity against PI3Kγ, PI3Kδ, mTOR and PI3Kβ, respectively. None of the other pan PI3K inhibitors showed more than 2-fold selectivity for PI3Kα over all other PI3K isoforms and mTOR. The six PI3K/mTOR inhibitors were screened for selectivity against a panel of 442 kinases (Supplementary Table 1). At 1 μM, SN32976 and buparlisib showed high selectivity for the class I PI3K enzymes, mTOR and mutant forms of PIK3CA with no other kinases showing >80% inhibition (Supplementary Figure 1). Pictilisib was similarly selective for PI3K and mTOR at 1 μM, with significant off-target inhibitory activity only against the pseudokinase JH2 domain of JAK1 (89%). The other compounds were less selective at 1 μM: ZSTK474 had high binding affinity for the class II PI3K enzymes PIK3C2B and PIK3C2G as well as the G2019S mutant of LRRK2 (99.7%), dactolisib showed >80% inhibition to CLK1, CLK4, ERBB3, FLT3 (D835Y mutant), the catalytic JH1 domains of JAK1 and JAK2, MAP4K2, PIK3C2B and PIK3C2G, and omipalisib was non-selective against PIK3C2B, PIK3C2G and PIK4CB. Due to their enhanced selectivity at 1 μM, SN32976, pictilisib and buparlisib were also tested at 10 μM. Again, SN32976 showed a high level of selectivity, with off-target activity only against PIK3C2B and PIK3C2G (Supplementary Figure 2). Buparlisib also remained selective at 10 μM, but bound to CLK1, CLK2 and CLK4 with >80% affinity, while pictilisib had >80% off-target binding at 10 μM to 34 kinases other than the class I PI3K enzymes, mTOR and mutant PIK3CA. In vitro inhibition of phosphorylated AKT expression and cell proliferation [1] To determine if SN32976 could prevent PI3K signaling in cells, phosphorylated AKT (pAKT) expression was investigated as a biomarker of PI3K activity in U-87 MG (PTEN null) and NCI-H460 (PIK3CA E545K mutant) cells. SN32976 inhibited both Thr308 and Ser473 pAKT expression in U-87 MG cells at concentrations as low as 10 nM (Figure 2A). The effect of SN32976 on pAKT expression in U-87 MG and NCI-H460 cells was greater than the inhibition of pAKT induced by buparlisib, particularly in U-87 MG cells, and comparable to the inhibitory activity of ZSTK474 and pictilisib (Figure 2B). Dactolisib, as a result of its greater potency against mTOR, was more active against Ser473 pAKT, while omipalisib induced greater inhibition of both phosphorylation sites of AKT, due to its greater potency against the PI3K and mTOR enzymes. Since PI3K/mTOR signaling is involved in the regulation of cell proliferation, we next investigated whether SN32976 could inhibit cell proliferation across a panel of cell lines with dysregulated PI3K signaling. The cell lines were PTEN null (U-87 MG, PC3, NZM34), H1047R PIK3CA mutant (HCT116, NZM40), E545K PIK3CA mutant (NCI-H460, MCF7) and PIK3CA amplified (FaDu). SN32976 potently inhibited cell proliferation in all cell lines, with EC50 values ranging from 18.5 ± 4.7 nM in NCI-H460 cells to 1787 ± 318 nM in NZM34 cells (Figure 2C). The EC50 values compared favorably with those of the other pan PI3K inhibitors, with equal or lower EC50 values observed with SN32976 compared to ZSTK474, pictilisib and buparlisib across the cell line panel. However, the greatest potencies at inhibiting cell proliferation were observed with dactolisib and omipalisib, most likely related to their enhanced mTOR inhibition. Overall the pattern of cell proliferation inhibition for the 6 inhibitors was highly consistent across the 8 cell lines. |
ln Vivo |
In the U-87 MG tumor xenograft model, SN32976 (37.5–75 mg/kg; gavage; daily; for 21 days) suppresses tumor growth[1].
Effects of SN32976 on glucose metabolism [1] Insulin's effects on glucose metabolism require PI3Kα activity and so impairments in glucose metabolism are a known on-target effect for drugs that target PI3Kα. In line with this, pretreatment with 10 mg/kg SN32976 for 1 h significantly impacted the ability of mice to tolerate exogenous 0.75 U/kg insulin (Figure 5A) or 2 g/kg glucose (Figure 5B), with insulin levels also significantly increased following glucose administration (Figure 5C). Furthermore, SN32976 increased the hepatic production of glucose from 2 g/kg pyruvate (Figure 5D). These results provide further pharmacodynamic evidence for in vivo on-target efficacy for SN32976. Antitumor efficacy of SN32976 relative to other PI3K inhibitors [1] To evaluate the in vivo antitumor efficacy of SN32976, immunodeficient mice were inoculated with U-87 MG (PTEN-null), NCI-H460 and HCT116 (both PIK3CA-mutant) cells and treated daily with SN32976 and ZSTK474, dactolisib, pictilisib or omipalisib once tumors had established. SN32976, at doses up to 100 mg/kg, inhibited tumor growth to a similar or enhanced extent compared to the other PI3K inhibitors in the three tumor models (Figure 6A). SN32976 was well tolerated at the doses tested, although bodyweight loss did exceed 10% at 100 mg/kg in mice with HCT116 tumors (Figure 6B). Tumor and plasma SN32976 parent and major metabolite concentrations were determined in mice with U-87 MG tumors after multiple doses of 100 mg/kg SN32976. Tumor and plasma concentrations of SN32976 were maintained above the concentrations required to achieve 50% inhibition of pAKT for 24 h after dosing (Figure 6C). The relative levels of major metabolites in the plasma (AUC = 2.0%, 33.6% and 8.8% of parent for M8, M9 and M17, respectively) and tumor (AUC = 3.7%, 32.9% and 2.4% of parent for M8, M9 and M17, respectively) were largely consistent with our earlier determination in plasma after SN32976 dosing at 30 mg/kg; however, M8 was found to preferentially distribute to tumor, where it was detected at higher levels than M17. |
Enzyme Assay |
In vitro kinase assays [1]
The biochemical activity of the drug compounds against PI3Kα, PI3Kβ, PI3Kγ, and PI3Kδ was determined using the PI3K (human) HTRF assay as described previously. Each PI3K enzyme was titrated and used at a concentration between its EC65 and EC80. ATP was added at its approximate Km value of 10 μM. mTOR activity was determined through the SelectScreen kinase profiling service using the Z’LYTE kinase assay. Compound selectivity against related protein or lipid kinases was determined using the scanMAXX KINOMEscan of 442 kinases. Metabolite identification [1] Identification of SN32976 metabolites was determined in liver microsomes isolated from pooled human donors, male CD1 mice, male Sprague-Dawley rats, male Beagle dogs and male Cynomolgus monkeys (1 mg/ml). Liver microsomes were incubated with 10 μM SN32976 in the presence of 2 mM NADPH for 60 min at 37°C. The reaction was quenched by mixing samples with acetonitrile and internal standard. The samples were analyzed on a Sciex 4000 QTRAP LC-MS/MS linked to a SPD-10AV UV/Vis detector operating at dual wavelengths of 220 nm and 254 nm. Observation of parent compound and metabolites was achieved using electrospray ionization while performing a mass scan from 300-750 m/z. For observed peaks, the m/z was determined and product ion scans were carried out. ADME/toxicity studies [1] Solubility, plasma protein binding, microsomal stability, cytochrome P450 induction/inhibition, hERG testing and Ames testing of SN32976 were carried out by contract research organizations. Brief descriptions of each assay are provided below, with detailed protocols available from the individual companies. Solubility of SN32976 was determined by adding compound to 100 mM potassium phosphate buffer (pH 7.4) with 1 mM MgCl2 adjusted to pH 7.4 or 2.0 until no further compound dissolved. Plasma protein binding was determined by adding 1 μM SN32976 to 10% human, dog, mouse or rat plasma separated from PBS (pH 7.4) by an equilibrium dialysis membrane and incubating for 16-24 h at 37°C at 500 rpm. Microsomal stability was determined in human, mouse, rat and dog liver microsomes (0.5 – 1 mg/ml) incubated with SN32976 at 1 μM in the presence of 2 mM NADPH for up to 60 min at 37°C. All solubility, plasma protein binding and liver microsomes samples were quantitatively analyzed by LC-MS/MS. Cytochrome P450 inhibition of CYP1A2, CYP2C9, CYP2C19, CYP2D6 and CYP3A4 was evaluated in human liver microsomes incubated with SN32976 and quantitated by LC-MS/MS or ethoxyresorufin fluorescence (CYP1A2). Cytochrome P450 induction was evaluated in cultured hepatocytes incubated with multiple concentrations of SN32976 for 72 h prior to qRT-PCR determination of mRNA expression of CYP1A2, CYP2B6 and CYP3A4. The effect of SN32976 on the rapidly activating delayed-rectifier potassium selective current (IKr) was evaluated in HEK 293 cells transfected with the hERG gene by patch-clamp assay. For Ames testing, SN32976 was evaluated for frameshift and base-pair substitution mutagenicity at concentrations up to 250 μg/well in four Salmonella tester strains (TA97a, TA98, TA100 and TA1535) and one Escherichia Coli strain (WP2 uvrA pKM101) in the presence and absence of rat liver S9 fraction. |
Cell Assay |
Western Blot Analysis[1]
Cell Types: U-87 MG cells Tested Concentrations: 1 nM, 3 nM, 10 nM, 30 nM, 100 nM Incubation Duration:for 1 h Experimental Results: Inhibited both Thr308 and Ser473 pAKT expression in U-87 MG cells. Cell proliferation and western blotting [1] Cells were seeded into 96-well plates at 400 – 5000 cells/well and left to settle for 2 h at 37 °C with 5% CO2 (and 5% O2 for NZM34 and NZM40). The plates were incubated with compounds at a range of concentrations in 0.2% or less DMSO for 5 days before fixing in 10% trichloroacetic acid and staining with 0.4% sulforhodamine B as described previously. U-87 MG and NCI-H460 cells were seeded into 12-well plates at approx. 500,000 cells/well and were left to settle for 24 h at 37 °C with 5% CO2. Cells were serum starved overnight then treated with drug compound for 15 min – 1 h, prior to stimulation with 500 nM insulin for 5 min. Cell lysates were prepared and blotted for pAKT, total AKT and β-actin as described previously. Quantitation of pAKT and total AKT staining was carried out by densitometry analysis using ImageJ 1.40g. |
Animal Protocol |
Animal/Disease Models: 6-8 week old female balb/c nude or female balb/c Rag1−/− mice inoculated with U-87 MG cells[1]
Doses: 37.5 mg/kg; 75 mg/kg Route of Administration: po; daily; for 21 days Experimental Results: Inhibited tumor growth in U-87 MG tumor xenograft models. Animals and dosing [1] Male CD1 mice (6-8 weeks old), male Sprague-Dawley rats (7-9 weeks old=) and male Beagle dogs (8-24 months old) were used for plasma pharmacokinetic studies. Tumor pharmacokinetic, pharmacodynamic and antitumor efficacy studies were carried out in 6-8 week old female balb/c nude or female balb/c Rag1−/− mice inoculated with 5×106 U-87 MG, NCI-H460 or HCT116 cells in PBS. Male CD1 mice (6-8 weeks old) were used for glucose metabolism studies. All animal experimentation followed approved protocols from relevant animal ethics committees with animals having ad libitum access to food and water. Animals were treated with the hydrochloride or mesylate salts of SN32976 (at the free base equivalent) formulated in 5% dextrose in water. For the rat dose proportionality study, SN32976 was formulated in Hot Rod Chemistry formulation #6. ZSTK474 was administered in 2% carboxymethylcellulose with 1% Tween-80. Dactolisib, pictilisib and omipalisib were formulated in HRC #6 for pharmacodynamic studies and in 50% PEG-400 in 20% 2-hydroxypropyl-β-cyclodextrin, 5% dextrose in water and 20% 2-hydroxypropyl-β-cyclodextrin, respectively for antitumor efficacy studies. Compounds were administered as a single IV or oral dose for pharmacokinetic and pharmacodynamic analysis or by oral gavage at qdx14 or qdx21 dosing schedules for evaluation of antitumor efficacy. SN32976 was administered by IP injection for glucose metabolism tests. All animals were monitored daily for signs of toxicity or weight loss after dosing and were culled if moderate signs of toxicity developed or if body weight loss exceeded 20% of pre-treatment weight. For tumor studies, animals were randomly stratified into treatment groups and dosing was initiated once tumors reached approx. 250 mm3 for pharmacodynamic analysis or 150 mm3 for antitumor efficacy. Tumor volumes were calculated from electronic caliper measurements of tumor diameter using the formula (L x w2) x π/6 (where L is the longest tumor diameter and w is the perpendicular diameter). In vivo pharmacology [1] Blood and tumor samples were collected at multiple time points after dosing (n=2-3/time point). Blood was collected into lithium-heparin or K2-EDTA tubes and processed to plasma by centrifugation at 6000 rpm for 5 min. Methanol was added to plasma for protein extraction. Tumor samples were snap-frozen in liquid nitrogen, pulverized using a BioPulverizer, and added to methanol. Quantitative analysis together with an internal standard was performed by LC-MS/MS either on a Sciex API 4000 triple quadrupole LC-MS/MS with Prominence HPLC or Agilent 6460 LC-MS/MS using multiple reaction monitoring and electrospray ionization. Plasma and tumor drug concentrations were quantified against a calibration curve of standard concentrations in the relevant matrix ranging from 2 – 10000 nM and compared to quality control standards at 3 different concentrations. Pharmacokinetic parameters were calculated using Phoenix WinNonlin v6.2 software. Tumor tissue lysates were prepared by adding lysis buffer to pulverized tumor tissue and centrifuging at 13000 rpm for 10 min at 4°C. Protein concentration was determined, and lysates blotted for pAKT, total AKT and β-actin as described previously. Pharmacokinetic-pharmacodynamic correlations were determined by Pearson product moment correlation analysis in SigmaPlot 13.0. Glucose metabolism analysis [1] Insulin tolerance tests, glucose tolerance tests and pyruvate tolerance tests were carried out in male CD-1 mice treated with SN32976, as described previously. Statistical significance of differences between means was determined by repeated measures 2-way ANOVA using Prism 7.00. |
ADME/Pharmacokinetics |
ADME and plasma pharmacokinetics of SN32976 [1]
We evaluated the ADME properties of SN32976 to ensure it was a suitable candidate for in vivo testing. SN32976 was highly soluble at low pH, was moderately bound to plasma proteins and had reasonable stability in liver microsomes (Table 2). It did not inhibit any of the major CYP isoforms at 20 μM, caused minimal induction of CYP1A2 and CYP3A4, was non-mutagenic and only inhibited hERG at high concentrations. The plasma pharmacokinetics of SN32976 were determined in mice, rats and dogs to identify if suitable concentrations of parent drug could be achieved in plasma in vivo. Following oral doses of 10 or 20 mg/kg, sufficient area under the curve (AUC) values were obtained (2504 nM.h and 3224 nM.h) to give suitable oral bioavailability (33.4% and 35.9%) values in mice and dogs, respectively, to support the use of oral dosing in subsequent in vivo studies (Figure 3A) (Supplementary Table 2). Low AUC (579 nM.h) and bioavailability (8.1%) values were obtained after 10 mg/kg oral dosing in rats; however, increased doses revealed non-linear pharmacokinetics in rats after oral dosing, such that high AUC values and much longer half-lives were observed (Figure 3B) (Supplementary Table 3). Identification of active metabolites of SN32976 [1] Incubation of SN32976 in mouse, rat, dog, monkey and human liver microsomes revealed the presence of 17 metabolites of SN32976 with m/z of between 530-615 (Supplementary Figure 3). The majority of these metabolites were found in either trace (<1% relative peak areas in the total ion chromatograph) or minor (1-10% relative peak areas) quantities in liver microsomes. However, 4 metabolites were found to be major (>10% relative peak areas) in at least one species. The putative structures were elucidated for the metabolites based on their molecular weights to provide a proposed biotransformation scheme for SN32976 (Figure 3C). SN32976 is thought to first undergo N-oxidation to give the unstable metabolite M10. This is then further degraded by deamination and dehydration to give M17 or by demethylation to give M9. M9 can be further N-demethylated to give M8. M9 and M17 were found to be major metabolites in liver microsomes of all species, while M8 was major in monkey microsomes, minor in human, trace in dog and not present in rat or mouse microsomes. M10 was major in mouse and rat, minor in monkey and dog and trace in human microsomes. To determine if the stable major metabolites of SN32976 are active against PI3K enzymes, M8, M9 and M17 were synthesized and tested for biochemical potency against PI3Kα, β, γ, δ and mTOR (Table 3). All 3 metabolites were active inhibitors of PI3K enzymes and mTOR, displaying greater potency against PI3Kα than SN32976 (PI3Kα IC50 = 5.8 ± 0.4, 8.2 ± 1.8 and 6.2 ± 0.5, for M8, M9 and M17, respectively). The metabolites retained moderate PI3Kα selectivity with M8, M9 and M17 showing 6.5-fold, 5.6-fold and 4.2-fold selectivity, respectively, for PI3Kα over other PI3K isoforms and mTOR. In addition, M17 lacked activity against PI3Kβ. Since the major metabolites of SN32976 can also inhibit PI3K enzymes and mTOR, we evaluated the plasma concentrations of the metabolites and the parent compound after SN32976 dosing in mice to determine their contribution to the pharmacokinetics of SN32976 (Figure 3D). Overall the combined AUC of SN32976 and the 3 stable major metabolites was 19942 nM.h, of which the parent compound contributed 71.8%, M8 0.13%, M9 27.1% and M17 1.0%. Pharmacokinetic-pharmacodynamic relationship of SN32976 [1] The pharmacokinetic-pharmacodynamic (PK/PD) relationship of SN32976 was investigated to determine if the achievable plasma and tumor concentrations could result in pAKT inhibition in vivo. NIH-III mice with PIK3CA-mutant NCI-H460 tumors were treated with a single dose of SN32976 and plasma and tumor were collected at multiple timepoints after dosing for pharmacokinetic analysis and evaluation of pAKT expression. SN32976 at well tolerated doses substantially inhibited the expression of pAKT (both Ser473 and Thr308) for 24 h at 100 and 75 mg/kg and for approx. 6 h at 37.5 mg/kg (Figure 4A). Parent drug concentrations in the plasma and tumor were dose-dependent and were still present 24 h after dosing (Figure 4B). Similarly, in mice with PTEN-null U-87 MG tumors, multiple dose levels of SN32976 inhibited pAKT expression for up to 24 h after dosing, with 100 mg/kg inducing greater knockdown of pAKT than pictilisib, dactolisib or omipalisib at their maximum tolerated dose levels (Figure 4C and Supplementary Figure 4). The SN32976 data from the NCI-H460 and U-87 MG tumors were pooled to determine if there was a robust relationship between plasma or tumor SN32976 concentrations and pAKT expression. PK/PD analysis revealed that pAKT inhibition had a linear-log correlation with SN32976, with stronger correlations observed for Ser473 pAKT (plasma: R2=0.75, P<0.0001, Pearson Correlation; tumor: R2 = 0.85, P<0.0001) (Figure 4D) than for Thr308 pAKT (plasma: R2=0.43, P<0.001; tumor: R2 = 0.57, P<0.0001) (Supplementary Figure 5), and for tumor SN32976 concentrations over plasma drug concentrations. Overall, greater inhibition of pAKT was observed with increased plasma and tumor concentrations of SN32976, such that plasma concentrations in excess of approx. 1 μM and tumor concentrations in excess of approx. 2 μM were required to achieve 50% inhibition of ser473 and Thr308 pAKT expression in vivo. |
Toxicity/Toxicokinetics |
SN32976 was well tolerated at the doses tested, although bodyweight loss did exceed 10% at 100 mg/kg in mice with HCT116 tumors (Figure 6B). [1]
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References | |
Additional Infomation |
Multiple therapeutic agents have been developed to target the phosphatidylinositol 3-kinase (PI3K) signaling pathway, which is frequently dysregulated in cancer promoting tumor growth and survival. These include pan PI3K inhibitors, which target class Ia PI3K isoforms and have largely shown limited single agent activity with narrow therapeutic windows in clinical trials. Here, we characterize SN32976, a novel pan PI3K inhibitor, for its biochemical potency against PI3K isoforms and mTOR, kinase selectivity, cellular activity, pharmacokinetics, pharmacodynamics and antitumor efficacy relative to five clinically-evaluated pan PI3K inhibitors: buparlisib, dactolisib, pictilisib, omipalisib and ZSTK474. SN32976 potently inhibited PI3K isoforms and mTOR, displaying preferential activity for PI3Kα and sparing of PI3Kδ relative to the other inhibitors, while showing less off-target activity than the clinical inhibitors in a panel of 442 kinases. The major metabolites of SN32976 were also potent PI3K inhibitors with similar selectivity for PI3Kα as the parent compound. SN32976 compared favorably with the clinically-evaluated PI3K inhibitors in cellular assays, inhibiting pAKT expression and cell proliferation at nM concentrations, and in animal models, inducing a greater extent and duration of pAKT inhibition in tumors than pictilisib, dactolisib and omipalisib at similarly tolerated dose levels and inhibiting tumor growth to a greater extent than dactolisib and ZSTK474 and with similar efficacy to pictilisib and omipalisib. These results suggest that SN32976 is a promising clinical candidate for cancer therapy with enhanced kinase selectivity and preferential inhibition of PI3Kα compared to first generation pan PI3K inhibitors, while retaining comparable anticancer activity. [1]
The 3 most prevalent stable metabolites identified in liver microsomes and mouse plasma were all active inhibitors of PI3K, with slightly greater potency against PI3Kα and similar PI3Kα-selectivity to the parent compound. These metabolites were most likely produced through demethylation or deamination of the dimethylamino substituent group of SN32976 that was added to enhance solubility rather than potency or selectivity, so it is not surprising that the metabolites retained PI3Kα activity and selectivity. Of these metabolites, the N-mono-methylated metabolite M9 was detected at levels of 33-38% of the parent compound in plasma and U-87 MG tumors and therefore likely contributed to the anticancer efficacy of SN32976 in vivo. The M8 and M9 metabolites also appeared to be more stable than the parent in U-87 MG tumors, suggesting that they may help prolong the antitumor activity of SN32976. That the metabolites retain similar PI3Kα-selectivity to the parent ensures that off-target effects are limited and that dosing with SN32976 has a sufficient therapeutic window to delay tumor growth at well tolerated dose levels. [1] In general, therapeutic targeting of PI3K signaling has focused on agents that target individual or all isoforms, sacrificing either single agent efficacy or tolerability in the process. Novel approaches have seen the use of isoform-sparing PI3K inhibitors, such as taselisib, which targets PI3Kα, δ, γ but spares PI3Kβ and is in phase III trials for metastatic breast cancer, having shown antitumor activity in earlier trials. In SN32976, we believe we have identified a second generation pan PI3K inhibitor with greater kinase selectivity than the first generation inhibitors as well as enhanced PI3Kα-selectivity relative to the other class I PI3K and mTOR isoforms. We expect that SN32976 will have reduced off-target effects due to its clean kinase profile as well as reduced on-target toxicity, due to its PI3Kα-selectivity. However, by maintaining some activity against PI3Kβ, δ, γ and mTOR, SN32976 is highly effective at preventing tumor growth in preclinical tumor models. We believe this data supports the progression of SN32976 into clinical development.[1] |
Molecular Formula |
C24H33F2N9O4S
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Molecular Weight |
581.64
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Exact Mass |
581.234
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Elemental Analysis |
C, 49.56; H, 5.72; F, 6.53; N, 21.67; O, 11.00; S, 5.51
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CAS # |
1246202-11-8
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PubChem CID |
46917573
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Appearance |
Typically exists as solid at room temperature
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Density |
1.5±0.1 g/cm3
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Boiling Point |
760.7±70.0 °C at 760 mmHg
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Flash Point |
413.8±35.7 °C
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Vapour Pressure |
0.0±2.6 mmHg at 25°C
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Index of Refraction |
1.672
|
LogP |
-0.2
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Hydrogen Bond Donor Count |
0
|
Hydrogen Bond Acceptor Count |
14
|
Rotatable Bond Count |
9
|
Heavy Atom Count |
40
|
Complexity |
919
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Defined Atom Stereocenter Count |
0
|
SMILES |
S(CCN(C)C)(N1CCN(C2N=C(N=C(N=2)N2CCOCC2)N2C(C(F)F)=NC3C(=CC=CC2=3)OC)CC1)(=O)=O
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InChi Key |
MKRQBWZUYRPLDM-UHFFFAOYSA-N
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InChi Code |
InChI=1S/C24H33F2N9O4S/c1-31(2)13-16-40(36,37)34-9-7-32(8-10-34)22-28-23(33-11-14-39-15-12-33)30-24(29-22)35-17-5-4-6-18(38-3)19(17)27-21(35)20(25)26/h4-6,20H,7-16H2,1-3H3
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Chemical Name |
2-[4-[4-[2-(difluoromethyl)-4-methoxybenzimidazol-1-yl]-6-morpholin-4-yl-1,3,5-triazin-2-yl]piperazin-1-yl]sulfonyl-N,N-dimethylethanamine
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Synonyms |
SN32976; 1246202-11-8; CHEMBL4564359; SN-32976; N-[2-({4-[4-[2-(difluoromethyl)-4-methoxy-1H-benzimidazol-1-yl]-6-(4-morpholinyl)-1,3,5-triazin-2-yl]-1-piperazinyl}sulfonyl)ethyl]-N,N-dimethylamine; 2-[4-[4-[2-(difluoromethyl)-4-methoxybenzimidazol-1-yl]-6-morpholin-4-yl-1,3,5-triazin-2-yl]piperazin-1-yl]sulfonyl-N,N-dimethylethanamine; SCHEMBL477340
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HS Tariff Code |
2934.99.9001
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Storage |
Powder -20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
Shipping Condition |
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
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Solubility (In Vitro) |
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
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Solubility (In Vivo) |
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.
Injection Formulations
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution → 50 μL Tween 80 → 850 μL Saline)(e.g. IP/IV/IM/SC) *Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution. Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline) Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO → 900 μL Corn oil) Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals). View More
Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO → 900 μL (20% SBE-β-CD in saline)] Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium) Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals). View More
Oral Formulation 3: Dissolved in PEG400  (Please use freshly prepared in vivo formulations for optimal results.) |
Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
1 mM | 1.7193 mL | 8.5964 mL | 17.1928 mL | |
5 mM | 0.3439 mL | 1.7193 mL | 3.4386 mL | |
10 mM | 0.1719 mL | 0.8596 mL | 1.7193 mL |
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.
Calculation results
Working concentration: mg/mL;
Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.
Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.
(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
(2) Be sure to add the solvent(s) in order.