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Acid Black 2 (Nigrosine)

Cat No.:V69001 Purity: ≥98%
Acid Black 2 is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
Acid Black 2 (Nigrosine)
Acid Black 2 (Nigrosine) Chemical Structure CAS No.: 8005-03-6
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
50mg
100mg
Other Sizes

Other Forms of Acid Black 2 (Nigrosine):

  • Amido Black 10B
Official Supplier of:
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Product Description
Acid Black 2 is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
Acid Black 2 (Nigrosine) (CAS#: 8005-03-6) is a water-soluble synthetic dye with the molecular formula C22H14N6Na2O9S2 and a molecular weight of 616.49 g/mol. It belongs to the class of acid dyes and is also known as Nigrosine or Aniline Black. The compound appears as a solid powder and is a biochemical compound that can be utilized as a biomaterial or organic/chemical reagent for biomedical research. Acid Black 2 is widely used as a biological stain for the detection of nucleic acids and proteins in various laboratory procedures such as electrophoresis and microscopy. It is also employed in the textile industry as a dye for wool, silk, and nylon. The compound has unique chemical properties that allow it to bind to specific cellular components, producing color changes that enable visualization of biological structures. It is typically stored at -20°C for long-term stability and requires protection from light during transportation and storage.
Biological Activity I Assay Protocols (From Reference)
Targets
No specific primary biological target has been identified for Acid Black 2 (Nigrosine), as it functions primarily as a dye and staining reagent rather than a direct pharmacological agent. However, the compound interacts with biological molecules through ionic and hydrophobic interactions. As an acid dye, Acid Black 2 binds to positively charged groups on proteins and other biological macromolecules, enabling its use as a stain for nucleic acids and proteins. The dye's sulfonate groups provide anionic character that facilitates binding to cationic sites on biological structures. In histological applications, the compound stains various tissue components, allowing for visualization of cellular and subcellular structures under the microscope. The compound's ability to bind to specific cellular components is based on its chemical structure rather than a specific receptor-ligand interaction.
ln Vitro
In vitro, Acid Black 2 is extensively used as a biological stain for the detection of nucleic acids and proteins in electrophoresis and microscopy applications. It is also used in histological staining procedures for the visualization of various tissue components. In biochemical research, the compound serves as a reagent for studying protein-nucleic acid interactions and for visualizing biomolecules in gel electrophoresis. The dye's unique chemical properties allow it to bind to specific cellular components, producing color changes that enable visualization. In the textile industry, it is used as a dye for wool, silk, and nylon. The compound is also employed in the development of colorimetric assays for the detection of various analytes. Its ability to form complexes with biomolecules makes it useful for studying protein structure and function.
ln Vivo
In vivo studies are not typically performed with Acid Black 2 (Nigrosine), as it is primarily a staining reagent and dye rather than a pharmacological agent. The compound is not intended for administration to living organisms for therapeutic purposes. However, the dye may be used in vivo for certain experimental applications such as vital staining or tracking of biological processes. In toxicological studies, the compound's potential for systemic absorption and toxicity may be evaluated, but comprehensive in vivo studies on the parent compound are not documented. The compound is primarily used in vitro for research and industrial applications rather than for in vivo experimentation.
Enzyme Assay
Cell-free assays involving Acid Black 2 are focused on its use as a staining reagent. Standard protocols for protein staining in electrophoresis involve preparing a staining solution of Acid Black 2 in methanol, acetic acid, and water. Gels are incubated in the staining solution for a specified time, followed by destaining in a methanol-acetic acid-water solution to remove excess dye. For microscopy applications, tissue sections are incubated with the dye solution, washed, and examined under the microscope. The dye's binding to nucleic acids and proteins can be quantified spectrophotometrically by measuring absorbance at the dye's characteristic wavelength. The compound's interactions with biomolecules can be studied using various techniques including UV-Vis spectroscopy and fluorescence microscopy.
Cell Assay
Cellular assays with Acid Black 2 involve its use as a staining reagent for the visualization of cellular components. In histological staining, cells or tissue sections are incubated with the dye solution, washed, and examined under the microscope. The dye binds to specific cellular components such as nucleic acids and proteins, producing color changes that enable visualization of cellular structures. The compound can also be used in flow cytometry for cell staining applications. In cell viability assays, the dye may be used to assess membrane integrity, as viable cells exclude the dye while dead cells take it up. The dye's staining properties can be optimized by adjusting concentration, pH, and incubation time to achieve specific staining patterns.
Animal Protocol
Animal studies are not typically conducted with Acid Black 2 (Nigrosine), as it is primarily a staining reagent and dye rather than a pharmacological agent. The compound is not intended for administration to animals for therapeutic purposes. However, the dye may be used in certain experimental applications such as vital staining or for tracking biological processes in animal models. In toxicological studies, the compound's potential for systemic absorption, tissue distribution, and toxicity may be evaluated in animal models. The compound's use as a dye means that comprehensive in vivo studies are not typically performed, and its safety profile is primarily based on its use as a research reagent and industrial dye.
ADME/Pharmacokinetics
Pharmacokinetic data for Acid Black 2 (Nigrosine) are not available, as the compound is primarily a dye and staining reagent rather than a drug candidate. With a molecular weight of 616.49 g/mol, the compound is a large molecule that would be expected to have limited membrane permeability and oral bioavailability if administered. The compound is water-soluble, which may facilitate renal excretion if absorbed. However, comprehensive pharmacokinetic studies including absorption, distribution, metabolism, and excretion have not been performed, as the compound is not intended for therapeutic use. For research purposes, the compound is typically handled as a neat chemical and not administered to living organisms for pharmacokinetic profiling. The compound's large size and ionic nature suggest limited systemic absorption following exposure.
Toxicity/Toxicokinetics
Toxicological data for Acid Black 2 (Nigrosine) are limited. The compound is a synthetic dye that is primarily used as a staining reagent and industrial dye. As with many synthetic dyes, the compound may cause skin and eye irritation upon contact. Appropriate safety precautions should be taken when handling the compound, including the use of personal protective equipment such as gloves and safety goggles. The compound should be handled in a well-ventilated area, and contact with skin and eyes should be avoided. In case of exposure, affected areas should be rinsed thoroughly with water. The compound is not classified as a carcinogen or mutagen based on available data, but comprehensive toxicological evaluation has not been performed. The compound requires protection from light during transportation and storage.
Additional Infomation
Ci Acid Black 1 is a dark brown granular solid. (NTP, 1992) Amide Black 10B is an organosodium salt formed by the condensation of Amide Black 10B (acidic form) with two equivalents of sodium hydroxide. It is used as a histological dye. Its structure contains 4-amino-5-hydroxy-3-[(p-nitrophenyl)azo]-6-(phenylazo)-naphthalene-2,7-disulfonate.
Acid Black 2 (Nigrosine) is a research chemical and dye, not an approved drug. It has no clinical trial or marketing approval status for therapeutic use. The compound is widely used as a biological stain for the detection of nucleic acids and proteins in electrophoresis and microscopy applications. It is also used in the textile industry as a dye for wool, silk, and nylon. As a biochemical compound, it can be utilized as a biomaterial or organic/chemical reagent for biomedical research. The compound has a molecular formula of C22H14N6Na2O9S2 and a molecular weight of 616.49 g/mol. It should be stored at -20°C for long-term stability and requires protection from light during transportation and storage. The compound is for research use only and not for human use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H14N6NA2O9S2
Molecular Weight
616.4909
Exact Mass
616.005
CAS #
8005-03-6
Related CAS #
3121-74-2 (parent cpd);83006-55-7 (hydrochloride salt);85294-31-1 (di-lithium salt);1064-48-8 (Parent)
PubChem CID
135442942
Appearance
Dark purple to black solid powder
Melting Point
greater than 662 °F (NTP, 1992)
LogP
7.94
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
14
Rotatable Bond Count
4
Heavy Atom Count
41
Complexity
1110
Defined Atom Stereocenter Count
0
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O: 2.86 mg/mL
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.6221 mL 8.1104 mL 16.2209 mL
5 mM 0.3244 mL 1.6221 mL 3.2442 mL
10 mM 0.1622 mL 0.8110 mL 1.6221 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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