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3'-Hydroxymirificin

Cat No.:V67691 Purity: ≥98%
3'-Hydroxymirificin (compound 3) is a naturally occurring compound obtained from the roots of Pueraria lobata.
3'-Hydroxymirificin
3'-Hydroxymirificin Chemical Structure CAS No.: 168035-02-7
Product category: ERR
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
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Product Description
3'-Hydroxymirificin (compound 3) is a naturally occurring compound obtained from the roots of Pueraria lobata. 3'-Hydroxymirificin (compound 3) has estrogenic and antiproliferation activity in MCF-7 human breast cancer cells.
3'-Hydroxymirificin (compound 3) is a naturally occurring compound that can be isolated from the roots of Pueraria lobata (kudzu). It has a molecular formula of C₂₆H₂₈O₁₄ and a molecular weight of 564.49 g/mol. This natural product possesses estrogenic activity and exhibits anti-proliferative effects against MCF-7 human breast carcinoma cells. As a naturally occurring isoflavonoid glycoside, 3'-Hydroxymirificin belongs to the class of compounds known for their phytoestrogenic properties. It is of interest for research into natural products with potential applications in hormone-related conditions and cancer research. The compound is intended for research use only.
Biological Activity I Assay Protocols (From Reference)
Targets
3'-Hydroxymirificin targets the estrogen receptor, exhibiting estrogenic activity. As a phytoestrogenic compound, it can bind to and modulate estrogen receptor signaling pathways. The compound demonstrates activity in MCF-7 human breast carcinoma cells, which are ER-positive, indicating that its effects are mediated at least in part through estrogen receptor interactions. In addition to its estrogenic activity, 3'-Hydroxymirificin also exhibits anti-proliferative effects, suggesting potential mechanisms beyond simple estrogen receptor agonism that may involve cell cycle regulation or apoptotic pathways.
ln Vitro
In vitro, 3'-Hydroxymirificin possesses estrogenic activity and demonstrates anti-proliferative effects against MCF-7 human breast carcinoma cells. The compound's estrogenic activity is typically assessed using ER-positive breast cancer cell lines such as MCF-7, where it may stimulate cell proliferation at lower concentrations or inhibit proliferation at higher concentrations depending on the cellular context. The anti-proliferative effect suggests potential utility in studying natural product-based approaches to cancer treatment. The compound's activity is attributed to its isoflavonoid glycoside structure, which allows interaction with estrogen receptors and modulation of estrogen-responsive gene expression.
ln Vivo
Specific in vivo activity data for 3'-Hydroxymirificin are not extensively documented in the publicly available literature. As a naturally occurring compound isolated from Pueraria lobata roots, its in vivo effects would be expected to relate to its estrogenic and anti-proliferative properties. The compound may be investigated in animal models of hormone-related conditions such as breast cancer or osteoporosis, given its phytoestrogenic activity. However, detailed in vivo pharmacological studies have not been published. Further research is needed to characterize its bioavailability, efficacy, and safety in vivo.
Enzyme Assay
In vitro enzyme/receptor binding assays for 3'-Hydroxymirificin typically involve competitive binding experiments using estrogen receptors (ERα and ERβ) and radiolabeled or fluorescently labeled estradiol as tracer. The compound's ability to displace the tracer from the receptor is measured to determine binding affinity. Assays are conducted in buffered solutions at physiological pH with appropriate receptor preparations. Binding affinity is expressed as IC₅₀ or Kd values. The compound's estrogenic activity can also be assessed using reporter gene assays with estrogen response element (ERE)-luciferase constructs in transfected cells to evaluate its ability to activate ER-mediated transcription.
Cell Assay
In vitro cell-based assays for 3'-Hydroxymirificin typically utilize MCF-7 human breast carcinoma cells, an ER-positive cell line, to assess both estrogenic and anti-proliferative activities. Cells are treated with varying concentrations of the compound for 24-72 hours. Cell proliferation is measured using MTT, CCK-8, or BrdU incorporation assays. Estrogenic activity is assessed by measuring the expression of estrogen-responsive genes using qPCR or by using reporter gene assays with ERE-luciferase constructs. Standard cell culture conditions (37°C, 5% CO₂) with appropriate media and serum supplementation are employed. Dose-response curves are generated to determine EC₅₀ and IC₅₀ values.
Animal Protocol
In vivo animal studies with 3'-Hydroxymirificin would typically involve administration of the compound to rodent models to evaluate its estrogenic and anti-proliferative effects. Potential study designs include xenograft models using MCF-7 cells to assess antitumor activity, or models of hormone-related conditions such as osteoporosis to evaluate estrogenic effects. Typical endpoints would include tumor growth measurements, assessment of estrogen-responsive gene expression in target tissues, and evaluation of bone density or other relevant biomarkers. All procedures must comply with institutional animal care and use guidelines. Detailed published in vivo protocols are not currently available.
ADME/Pharmacokinetics
Specific pharmacokinetic data for 3'-Hydroxymirificin are not extensively documented in the publicly available literature. As a naturally occurring glycoside with a molecular weight of 564.49 g/mol, its oral bioavailability would be influenced by factors such as intestinal absorption, deglycosylation by gut microbiota, and first-pass metabolism. The compound is intended for research use only. Information concerning product stability, particularly in solution, has rarely been reported. Standard laboratory practices should be followed for storage and handling. Further studies are needed to characterize its pharmacokinetic profile.
Toxicity/Toxicokinetics
Toxicological data for 3'-Hydroxymirificin are not extensively documented in the publicly available literature. As a naturally occurring compound isolated from Pueraria lobata roots, it is generally considered to have low toxicity based on the traditional use of kudzu as a food and medicinal plant. However, comprehensive toxicological studies including acute toxicity, genotoxicity, and organ-specific toxicity have not been published. The compound is intended for research use only and is not approved for human therapeutic applications. Standard safety precautions should be observed when handling this compound, including the use of appropriate personal protective equipment.
References

[1]. Dual effects of isoflavonoids from Pueraria lobata roots on estrogenic activity and anti-proliferation of MCF-7 human breast carcinoma cells. Bioorg Chem. 2019 Mar;83:135-144.

Additional Infomation
3'-Hydroxymirificin (CAS#: 168035-02-7) has a molecular formula of C₂₆H₂₈O₁₄ and a molecular weight of 564.49 g/mol. Its IUPAC name is 8-((2S,3R,4R,5S,6R)-6-((((2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)tetrahydrofuran-2-yl)oxy)methyl)-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl)-3-(3,4-dihydroxyphenyl)-7-hydroxy-4H-chromen-4-one. The compound is a natural product isolated from Pueraria lobata roots. It possesses estrogenic activity and anti-proliferation effects on MCF-7 human breast carcinoma cells. This compound is not a drug and has not undergone clinical trials for therapeutic use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H28O14
Exact Mass
564.147
CAS #
168035-02-7
PubChem CID
145874175
Appearance
Typically exists as solid at room temperature
LogP
-2.1
Hydrogen Bond Donor Count
9
Hydrogen Bond Acceptor Count
14
Rotatable Bond Count
6
Heavy Atom Count
40
Complexity
946
Defined Atom Stereocenter Count
8
SMILES
C1[C@@]([C@H]([C@@H](O1)OC[C@@H]2[C@H]([C@@H]([C@H]([C@@H](O2)C3=C(C=CC4=C3OC=C(C4=O)C5=CC(=C(C=C5)O)O)O)O)O)O)O)(CO)O
InChi Key
UXSOWCXXXQKAGC-QOIVFALESA-N
InChi Code
InChI=1S/C26H28O14/c27-8-26(36)9-39-25(24(26)35)38-7-16-19(32)20(33)21(34)23(40-16)17-14(29)4-2-11-18(31)12(6-37-22(11)17)10-1-3-13(28)15(30)5-10/h1-6,16,19-21,23-25,27-30,32-36H,7-9H2/t16-,19-,20+,21-,23+,24+,25-,26-/m1/s1
Chemical Name
8-[(2S,3R,4R,5S,6R)-6-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]-3-(3,4-dihydroxyphenyl)-7-hydroxychromen-4-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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