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NCP26

NCP26
NCP26 Chemical Structure CAS No.: 2396683-89-7
Product category: c-Myc
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
NCP26 is an ATP-competitive ProRS inhibitor (KD value of 271 nM in the absence of proline and 0.35 nM in the presence of 100 μM proline). NCP26 activates AAR, inducing G0/G1 phase arrest, apoptosis, caspase cleavage, and PARP cleavage. NCP26 downregulates the expression of MYC, TCF3, and CCND1. NCP26 inhibits the growth of multiple myeloma cells. NCP26 can be used in multiple myeloma research.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
NCP26 is an ATP-competitive recombinant ProRS inhibitor. Its binding affinity increases more than 750-fold in the presence of 100 μM proline, with a KD value of 0.35 nM[1]. NCP26 (0.5 μM; 48 h) maintains antiproliferative activity against AMO1 and RPMI 8226 multiple myeloma (MM) cells in the range of 0 to 20 mM proline concentrations, and its potency is not reduced at high proline concentrations[1]. NCP26 (0.01–10 μM; 96 h) is 10-fold more potent against AMO1 multiple myeloma (MM) cells than against healthy donor peripheral blood mononuclear cells (PBMCs), with an EC50 value of 0.1 μM for the former and approximately 1 μM for the latter after 96 h of treatment[1]. NCP26 can effectively inhibit the growth of most multiple myeloma (MM) cell lines, with EC50 values ranging from 135 nM to 1.1 μM[1]. NCP26 (0.5 μM; 6–48 h) can induce G0/G1 phase cell cycle arrest and caspase-dependent apoptosis in AMO1 and RPMI 8226 multiple myeloma (MM) cells[1].
ln Vivo
NCP26 (2.5–10 mg/kg; intraperitoneal injection; once daily; for 21 days) significantly inhibited the growth of multiple myeloma tumors in CB17 SCID mice carrying AMO1 xenografts (P = 0.01 and P < 0.001, respectively) and prolonged their overall survival (P = 0.01 and P < 0.001, respectively), without causing significant weight loss [1]. NCP26 (10 mg/kg; once daily) also significantly inhibited the growth of multiple myeloma tumors in AMO1 xenograft mouse models (P = 0.005) and prolonged host survival (P < 0.001), without causing weight loss [2].
Cell Assay
Cell cycle analysis [1]
Cell Types: AMO1, RPMI 8226 MM cell lines
Tested Concentrations: 0.5 μM
Incubation Duration: 6 hours, 24 hours, 48 hours
Experimental Results: At 6 hours, both cell lines induced G0/G1 phase cell cycle arrest, and the degree of arrest increased at 24 hours. Induced apoptosis, manifested as an increase in Annexin-V positive cells, sub-G1 phase cell populations, and mitochondrial damage. Induced cleavage of caspase-3, -8, -9, and PARP, with cleavage in a time- and dose-dependent manner.
Western Blot Analysis [1]
Cell Types: AMO1, RPMI 8226 MM cell lines
Tested Concentrations: 0-1 μM
Incubation Duration: 6 hours
Experimental Results: The protein levels of MYC, PIM2, CCND1, and TCF3 in both cell lines decreased in a dose-dependent manner. This is consistent with the effect of EPRS shRNA knockdown on the protein levels of MYC, PIM2, CCND1, and TCF3.
Animal Protocol
Animal/Disease Models:CB17 SCID (5-week-old females, subcutaneously inoculated with AMO1 cells)[1]
Doses: 2.5 mg/kg; 10 mg/kg
Route of Administration: Intraperitoneal injection; once daily for 21 days
Experimental Results: Compared with the vector control group, AMO1 tumor growth was significantly inhibited (control group vs. 2.5 mg/kg, P = 0.01; control group vs. 10 mg/kg, P < 0.001). The tumor growth inhibition effect of the 10 mg/kg dose group was better than that of the 2.5 mg/kg dose group. No significant weight loss was observed in either treatment group. Overall survival was significantly prolonged compared with the vector control group (control group vs. 2.5 mg/kg, P = 0.01; control group vs. 10 mg/kg, P < 0.001). In the treatment group, the expression of MYC, CCND1, and TCF3 was downregulated, while the expression of p-GCN2 and DDIT3 was upregulated in the tumors.
References

[1]. Prolyl-tRNA synthetase as a novel therapeutic target in multiple myeloma. Blood Cancer J. 2023;13(1):12. Published 2023 Jan 12.

[2]. Discovery of Prolyl-tRNA Synthetase As a Novel Target in Multiple Myeloma[J]. Blood, 2021, 138: 890.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H23N5O2
Molecular Weight
365.44
CAS #
2396683-89-7
Appearance
Typically exists as solids at room temperature
SMILES
O=C(NC1CC=2C=CC=CC2C1)C3=NC=CN=C3NC(=O)N4CCCCC4
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7364 mL 13.6821 mL 27.3643 mL
5 mM 0.5473 mL 2.7364 mL 5.4729 mL
10 mM 0.2736 mL 1.3682 mL 2.7364 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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