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ATI-1

Cat No.:V129589 Purity: ≥98%
ATI-1 is an autophagy initiation inhibitor.
ATI-1
ATI-1 Chemical Structure CAS No.: 1242983-93-2
Product category: p97
This product is for research use only, not for human use. We do not sell to patients.
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500mg
1g
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Product Description
ATI-1 is an autophagy initiation inhibitor. ATI-1 targets the valine-containing protein (VCP/p97), disrupting its interaction with UFL1, impairing VCP-related UFMylation homeostasis, promoting the polyubiquitination and degradation of Beclin1, and blocking the formation of early autophagosomes. Under nutrient-deprived conditions, ATI-1 induces co-death in autophagy-dependent malignant tumor cells, accompanied by decreased mitochondrial membrane potential, reduced reactive oxygen species (ROS) levels, and lysosomal stress. ATI-1 has shown antitumor efficacy in a mouse model of pancreatic adenocarcinoma xenograft. ATI-1 can be used in research on pancreatic adenocarcinoma and lung cancer.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
ATI-1 (10 μM; 20 h, with 20 μM CQ added in the last 4 h) effectively inhibited the formation of autophagosomes in HeLa cells[1]. ATI-1 (5-20 μM; 24 h, with 10 μM added for 2 h under EBSS starvation conditions) inhibited the initiation of autophagy in HeLa cells by reducing Beclin1 protein levels and inhibiting autophagosome formation. LC3II levels decreased in a dose-dependent manner at concentrations of 5, 10 and 20 μM over 24 h, but anomalous LC3II accumulation was observed under starvation conditions, which did not reflect the formation of functional autophagosomes[1]. ATI-1 (5–20 μM; 48 h, in combination with chloroquine) significantly inhibited autophagy initiation in autophagy-dependent NCI-H1299 and MIA PaCa-2 cells by reducing Beclin1 protein levels, dose-dependently reduced LC3II levels over 48 h at concentrations of 5, 10, and 20 μM, and inhibited autophagosome formation in MIA PaCa-2 cells when used in combination with chloroquine [1]. ATI-1 (20 μM; 48–72 h) selectively inhibited proliferation, colony formation, migration, and invasion of autophagy-dependent NCI-H1299 and MIA PaCa-2 cells, with higher inhibitory efficacy than that against HeLa cells with lower autophagy dependence [1]. ATI-1 (30 μM; 24 h) disrupts the interaction between VCP and UFL1 in HeLa cells, reduces the UFMylation level of VCP, weakens the interaction between VCP and Beclin1, and selectively impairs the interaction between specific cofactors of VCP (VCP-ATXN3, VCP-NPLOC4) [1]. ATI-1 (3.13-50 μM) can directly bind purified full-length VCP (Kd = 25.1 μM) and purified VCP N-terminal domain (Kd = 32.5 μM) with measurable affinity [1]. ATI-1 (20 μM; 48 h) can induce G1 phase arrest in autophagy-dependent NCI-H1299 and MIA PaCa-2 cells, but does not significantly induce apoptosis [1]. ATI-1 (5-10 μM; 2-24 hours) exacerbates the metabolic vulnerability of autophagy-dependent NCI-H1299 and MIA PaCa-2 cells under EBSS-induced nutrient deprivation, leading to non-apoptotic cell death, decreased mitochondrial membrane potential, decreased ROS levels and lysosomal stress. Among them, 5 μM ATI-1 combined with starvation can reduce cell viability by about 50-70% within 24 hours[1].
ln Vivo
ATI-1 (50 mg/kg; intraperitoneal injection; once daily for 14 days) showed strong antitumor efficacy in the MIA PaCa-2 pancreatic adenocarcinoma xenograft mouse model, significantly reducing tumor growth levels and the levels of tumor proliferation and autophagy markers, and had extremely low systemic toxicity [1].
Cell Assay
Cell autophagy assay [1]
Cell Types: HeLa cells
Tested Concentrations: 10 μM; 20 μM CQ (last 4 hours)
Incubation Duration: 20 hours; 4 hours (CQ)
Experimental Results: Significantly reduced the number of autophagosomes per cell.
Western Blot Analysis [1]
Cell Types: HeLa Cells
Tested Concentrations: 10 μM (10 μM CQ added in the last 2 hours); 5, 10, 20 μM; 20 μM; 10 μM (EBSS starvation treatment)
Incubation Duration: 24 hours; 24 hours; 24 hours; 2 hours (EBSS starvation treatment)
Experimental Results: Treatment with 10 μM CQ for 24 hours, followed by the addition of 10 μM CQ in the last 2 hours, inhibited the LC3II accumulation observed in the CQ-only group. LC3II levels decreased in a dose-dependent manner after treatment with 5, 10, and 20 μM CQ for 24 hours. Beclin1 protein levels decreased after treatment with 20 μM CQ for 24 hours. At a concentration of 10 μM, after 2 hours of EBSS starvation, LC3II showed contradictory accumulation, but autophagy flux analysis confirmed a reduction in LC3 spots.
Western Blot Analysis [1]
Cell Types: NCI-H1299 cells, MIA PaCa-2 cells
Tested Concentrations: 5, 10, 20 μM (NCI-H1299); 10 μM (NCI-H1299, with 10 μM CQ added in the last 2 hours); 5, 10, 20 μM (MIA PaCa-2); 10 μM (MIA PaCa-2, with 10 μM CQ added in the last 2 hours); 10 μM (MIA PaCa-2, with 20 μM CQ added in the last 6 hours); 20 μM (NCI-H1299, MIA PaCa-2)
Incubation Duration: 48 hours (NCI-H1299); 48 hours (NCI-H1299, with 2 hours of CQ added); 48 48 hours (MIA PaCa-2); 48 hours (MIA PaCa-2, plus 2 hours of CQ); 48 hours (MIA PaCa-2, plus 6 hours of CQ); 48 hours (NCI-H1299, MIA PaCa-2)

Experimental Results: LC3II levels decreased in a dose-dependent manner in both NCI-H1299 and MIA PaCa-2 cells within 48 hours. In MIA PaCa-2 cells, treatment with 10 μM chloroquine for 48 hours, followed by the addition of 10 μM CQ in the last 2 hours, significantly reduced LC3II levels, while having less effect on NCI-H1299 cells. Compared to chloroquine alone, treatment with 10 μM chloroquine for 48 hours, followed by the addition of 20 μM chloroquine in the last 6 hours, reduced yellow autophagosome/autolysosomal spots in MIA PaCa-2 cells. In both cell lines, treatment with 20 μM chloroquine for 48 hours significantly reduced Beclin1 protein levels.
Animal Protocol
Animal/Disease Models:Nude Mice [1]
Doses: 50 mg/kg<
Route of Administration:Intraperitoneal injection; once daily; for 14 days
Experimental
Experimental Results:Significantly inhibited tumor growth, with a significant reduction in both final tumor weight and volume compared to the control group. Significantly reduced expression of LC3 and Ki-67 within the tumor. No significant weight loss or pathological abnormalities in major organs (heart, liver, spleen, lungs, kidneys) were observed.
References

[1]. ATI-1 mediated disruption of the VCP-UFL1-Beclin1 axis thwarts autophagy initiation to trigger metabolic catastrophe in autophagy-addicted cancers. Bioorg Chem. Published online April 25, 2026.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H14F2N2O2S3
Molecular Weight
400.49
CAS #
1242983-93-2
Appearance
Typically exists as solids at room temperature
SMILES
FC1=CC(F)=CC(NS(=O)(C2=CC=C(C3=NC(C(C)C)=CS3)S2)=O)=C1
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.4969 mL 12.4847 mL 24.9694 mL
5 mM 0.4994 mL 2.4969 mL 4.9939 mL
10 mM 0.2497 mL 1.2485 mL 2.4969 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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