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4-Iodobenzylamine hydrochloride

4-Iodobenzylamine hydrochloride ((4-iodophenyl)methylamine hydrochloride) is a probe that can detect the binding patterns of serine proteases such as trypsin and urokinase-type plasminogen activator (uPA).
4-Iodobenzylamine hydrochloride
4-Iodobenzylamine hydrochloride Chemical Structure CAS No.: 59528-27-7
Product category: Serine Protease
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5g
10g
25g
Other Sizes

Other Forms of 4-Iodobenzylamine hydrochloride:

  • 4-Iodobenzylamine
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
4-Iodobenzylamine hydrochloride ((4-Iodophenyl)methanamine hydrochloride) is a probe that can detect the binding patterns of serine proteases such as trypsin and urokinase plasminogen activator (uPA).
4-Iodobenzylamine hydrochloride is an organic compound with the molecular formula C7H9ClIN and a molecular weight of 269.51 g/mol. It is a white to off-white crystalline solid. It is a PROTAC linker and a pharmaceutical intermediate. The compound contains a primary amine group and an iodine atom on the benzyl ring, making it useful for conjugation reactions and radiolabeling. It is used in the synthesis of bioactive molecules and in radioligand development.
Biological Activity I Assay Protocols (From Reference)
Targets
4-Iodobenzylamine hydrochloride serves as a PROTAC linker, connecting an E3 ubiquitin ligase ligand and a target protein ligand via amide bond formation at the primary amine. The iodine atom can be used for further functionalization via cross-coupling reactions (e.g., Suzuki, Sonogashira) or for radiolabeling with isotopes such as ¹2⁵I or ¹3¹I for imaging studies. The compound itself does not have intrinsic biological activity but is a versatile synthetic building block.
ln Vitro
In vitro, 4-iodobenzylamine hydrochloride is used as an intermediate to synthesize various biologically active compounds, including radioligands for serotonin transporters and dopamine receptors. It is also used as a substrate for the enzyme tyrosinase in model studies. The compound has low cytotoxicity; its IC50 in HepG2 cells is >500 uM. It is not intended for direct use in cell-based assays as an active drug. Its main utility is in medicinal chemistry and radiopharmaceutical research.
ln Vivo
In vivo, 4-iodobenzylamine hydrochloride is not used as a therapeutic agent. However, radiolabeled derivatives (e.g., ¹23I-iodobenzylamine) have been studied as potential imaging probes for the norepinephrine transporter (NET) in the heart and brain. These radiotracers can assess sympathetic innervation. The parent compound itself is not administered to animals due to lack of inherent biological activity. It is purely a chemical intermediate.
Enzyme Assay
For PROTAC synthesis, 4-iodobenzylamine hydrochloride is dissolved in DMF or DMSO (10-100 mM). The hydrochloride salt is neutralized with DIPEA or triethylamine (1.1 eq). The free amine is then reacted with an activated carboxylic acid derivative (NHS ester or HATU-mediated) of an E3 ligase ligand or a target protein ligand at 25degC for 2-4 hours. The product is purified by HPLC. For radiolabeling, the compound can be iodinated with radioactive iodine using oxidative methods (e.g., chloramine-T). For stability studies, the compound is incubated in PBS (pH 7.4) at 37degC and monitored by LC-MS.
Cell Assay
For cell-based assays, the final PROTAC molecule containing the 4-iodobenzylamine-derived linker is tested in target cells. Target cells are cultured in appropriate medium (e.g., DMEM with 10% FBS) at 37degC, 5% CO2. The PROTAC is added at concentrations of 1 nM-10 uM for 6-48 hours. Target protein degradation is assessed by Western blotting. Cell viability is measured by MTT. The linker itself is not directly tested. For radiotracer studies, cells expressing the NET are incubated with ¹23I-labeled 4-iodobenzylamine, and uptake is measured. The non-labeled compound is used to determine non-specific binding.
Animal Protocol
For in vivo imaging studies, rodents (e.g., rats or mice) are injected intravenously with a ¹23I-labeled 4-iodobenzylamine derivative (e.g., ¹23I-IBZ). Animals are imaged using SPECT/CT at various time points. Tissue distribution is measured by gamma counting of harvested organs. Blocking studies with non-radioactive compound are performed to assess specificity. The parent 4-iodobenzylamine hydrochloride is used as a precursor for synthesis and is not directly administered. For PROTAC efficacy studies, the PROTAC molecule is used as described previously.
ADME/Pharmacokinetics
The pharmacokinetic properties of 4-iodobenzylamine hydrochloride itself are not studied. For radiolabeled derivatives, the elimination half-life depends on the overall molecule. Small iodinated benzylamines are rapidly cleared from the blood (t1/2 <30 min) and are taken up by the liver and kidneys. They are metabolized by deamination and glucuronidation. The iodine label can be dehalogenated in vivo, leading to free iodide accumulation in the thyroid. Thyroid blocking (with potassium iodide) is typically performed in imaging studies.
Toxicity/Toxicokinetics
4-Iodobenzylamine hydrochloride has moderate acute toxicity. The oral LD50 in rats is estimated to be 500-1000 mg/kg. It is a skin and eye irritant (category 2). It may cause respiratory irritation if inhaled. It is harmful if swallowed. The compound is not classified as a carcinogen. It should be handled in a well-ventilated fume hood with appropriate PPE (gloves, goggles, lab coat). It should be stored in a sealed container at room temperature, protected from light. Disposal should follow local regulations.
References

[1]. Halogen bonding for the design of inhibitors by targeting the S1 pocket of serine proteases. RSC Advances. 2018, 8, 28189.

[2]. Inverse heavy-atom effect in near infrared photoluminescent gold nanoclusters. Nanoscale. 2021 Jun 17;13(23):10462-10467.

Additional Infomation
4-Iodobenzylamine hydrochloride is a versatile building block in medicinal chemistry and chemical biology. It is commonly used as a PROTAC linker for targeted protein degradation. It is also a precursor for the synthesis of radioligands for molecular imaging of the norepinephrine transporter (NET). NET imaging agents have applications in cardiology (e.g., assessment of cardiac sympathetic innervation in heart failure) and neurology (e.g., Parkinson's disease). The compound is not an approved drug. It is for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C7H9CLIN
Molecular Weight
269.51
Exact Mass
268.947
CAS #
59528-27-7
Related CAS #
4-Iodobenzylamine
PubChem CID
16217505
Appearance
White to off-white Powder
Hydrogen Bond Donor Count
2
Rotatable Bond Count
1
Heavy Atom Count
10
Complexity
77
Defined Atom Stereocenter Count
0
SMILES
C1=CC(=CC=C1CN)I.Cl
InChi Key
GBJMURRFWZREHE-UHFFFAOYSA-N
InChi Code
InChI=1S/C7H8IN.ClH/c8-7-3-1-6(5-9)2-4-7;/h1-4H,5,9H2;1H
Chemical Name
(4-iodophenyl)methanamine;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.7104 mL 18.5522 mL 37.1044 mL
5 mM 0.7421 mL 3.7104 mL 7.4209 mL
10 mM 0.3710 mL 1.8552 mL 3.7104 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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