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IKKβ-IN-5

IKKβ-IN-5 is an orally effective selective IKKβ inhibitor with an IC50 value of 7.5 nM.
IKKβ-IN-5
IKKβ-IN-5 Chemical Structure Product category: IκB IKK
This product is for research use only, not for human use. We do not sell to patients.
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500mg
1g
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Product Description
IKKβ-IN-5 is an orally active and selective IKKβ inhibitor with an IC50 of 7.5 nM. IKKβ-IN-5 directly inhibits IKKβ phosphorylation, thereby attenuating NF-κB-mediated inflammatory and survival signaling, while simultaneously promoting autophagy. IKKβ-IN-5 exhibits 6-fold selectivity for IKKβ compared to its homologous kinase IKKα. IKKβ-IN-5 exerts a potent antiproliferative effect through a dual mechanism—inducing G₂/M phase cell cycle arrest and activating autophagy—even under in vitro inflammatory stimuli. IKKβ-IN-5 demonstrates favorable pharmacokinetic properties in vivo and inhibits tumor growth. IKKβ-IN-5 may be used in research related to colorectal cancer and other potentially inflammation-driven malignancies.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
IKKβ-IN-5 (compound LP46) (0-2 μM, 48 hours) exhibited potent antiproliferative activity in RKO and HCT116 cells and low toxicity in NCM460 cells [1]. IKKβ-IN-5 (0.75-3.0 μM, 48 hours) affected IKKβ phosphorylation and the protein expression of its downstream target IκBα in RKO and HCT116 cells by directly inhibiting IKKβ phosphorylation [1]. IKKβ-IN-5 (0.75-3.0 μM, 7 days) had a long-term antiproliferative effect in RKO and HCT116 cells [1]. IKKβ-IN-5 (0.75-3.0 μM, 48 hours) exerts its antiproliferative effect through a dual mechanism (including inducing G2/M phase cell cycle arrest and activating autophagy) even in the presence of inflammatory stimulation, and can block NF-κB pathway activation, thereby inhibiting downstream inflammatory responses in RKO and HCT116 cells [1]. IKKβ-IN-5 (3 μM, 48 hours) can directly counteract the IKKβ-mediated pro-inflammatory and anti-autophagy effects in IKKβ knockdown or overexpression colorectal cancer cells [1].
Cell Assay
Cell Viability Assay[1]
Cell Types: HCT116, RKO, and NCM460 cells
Tested Concentrations: 0, 0.4 0.8, 1.2, 1.6 and 2.0 μM
Incubation Duration: 48 h
Experimental Results: Exhibited potent inhibitory activity, with IC50 values of 3.94 μM for RKO and 2.59 μM for HCT116. Showed significantly lower toxicity in NCM460 cells, with an IC50 of 21.25 μM.
Western Blot Analysis[1]
Cell Types: RKO and HCT116 cells
Tested Concentrations: 0.75, 1.5, and 3 μM
Incubation Duration: 48 h
Experimental Results: Significantly reduced phosphorylation of both IKKβ and IκBα in a dose-dependent manner. Induced greater inhibition of IKKβ phosphorylation. Had no significant impact on either the expression or phosphorylation of TAK1 or MAP3K1.
Cell Proliferation Assay[1]
Cell Types: RKO and HCT116 cells
Tested Concentrations: 0.75, 1.5, and 3 μM
Incubation Duration: 7 days
Experimental Results: Observed Dose-dependent suppression of colony formation. Demonstrated superior efficacy at the highest dose.
Cell Cycle Analysis[1]
Cell Types: RKO and HCT116 cells
Tested Concentrations: 0.75, 1.5, and 3 μM
Incubation Duration: 48 h
Experimental Results: Revealed a significant accumulation of RKO and HCT116 cells in the G2/M phase.
Cell Proliferation Assay[1]
Cell Types: RKO and HCT116 cells
Tested Concentrations: 0.75, 1.5, and 3 μM
Incubation Duration: 48 h
Experimental Results: Significantly inhibited DNA synthesis in both RKO and HCT116 cells.
Western Blot Analysis[1]
Cell Types: RKO and HCT116 cells
Tested Concentrations: 0.75, 1.5, and 3 μM
Incubation Duration: 48 h
Experimental Results: Dose-dependently increased expression levels of key autophagy-related markers, Beclin1 and LC3A/B both markers in RKO and HCT116 cells. Enhanced expression of Beclin1 and LC3A/ B in these cells in RKO and HCT116 cells with TNF-α. Reduced p65 expression and inhibited its nuclear translocation in a dose-dependent manner.
RT-PCR[1]
Cell Types: RKO and HCT116 cells
Tested Concentrations: 0.75, 1.5, and 3 μM
Incubation Duration: 48 h
Experimental Results: Significantly down regulated the expression of TNF-α, IL-6, and IL-1β in a dose dependent manner.
Western Blot Analysis[1]
Cell Types: IKKβ knockdown CRC cells or IKKβ overexpression CRC cells
Tested Concentrations: 3 μM
Incubation Duration: 48 h
Experimental Results: Reduced the phosphorylation levels of both IκBα and p65, while concurrently increasing the expression of key autophagy markers, Beclin1 and LC3A/B and exhibited superior efficacy in inhibiting IKKβ phosphorylation and suppressing NF-κB signaling upon TNF-α stimulation in IKKβ knockdown cells. Increased p-IκBα and p-p65 levels and reduced Beclin1 and LC3A/B expression upon TNF-α stimulation in overexpression of IKKβ cells. Decreased NF-κB phosphorylation and restoration of autophagy-related protein levels, even under TNF-α stimulation and IKKβ-overexpressing conditions.
Cell Viability Assay[1]
Cell Types: HCT116, RKO, and NCM460 cells
Tested Concentrations: 0, 0.4 0.8, 1.2, 1.6 and 2.0 μM
Incubation Duration: 48 h
Experimental Results: Exhibited potent inhibitory activity, with IC50 values of 3.94 μM for RKO and 2.59 μM for HCT116. Showed significantly lower toxicity in NCM460 cells, with an IC50 of 21.25 μM.
References

[1]. https://pubmed.ncbi.nlm.nih.gov/41327756/

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H24FN7
Molecular Weight
417.48
Appearance
Typically exists as solids at room temperature
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3953 mL 11.9766 mL 23.9532 mL
5 mM 0.4791 mL 2.3953 mL 4.7906 mL
10 mM 0.2395 mL 1.1977 mL 2.3953 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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