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Topoisomerase I inhibitor 17

Cat No.:V104482 Purity: ≥98%
Topoisomerase I inhibitor 17 (compound 7h) is a topoisomerase I (Top1) inhibitor.
Topoisomerase I inhibitor 17
Topoisomerase I inhibitor 17 Chemical Structure CAS No.: 2413582-45-1
Product category: Reactive Oxygen Species
This product is for research use only, not for human use. We do not sell to patients.
Size Price
500mg
1g
Other Sizes
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Product Description
Topoisomerase I inhibitor 17 (Compound 7h) is a Topoisomerase I (Top1) inhibitor. Topoisomerase I inhibitor 17 reduces DDX5 and reverses the locking of Top1 activity by DDX5. Topoisomerase I inhibitor 17 induces Top1-mediated DNA damage and promotes reactive oxygen species (ROS) production. Topoisomerase I inhibitor 17 induces apoptosis (reduced anti-apoptotic proteins XIAP, Bcl-2, Survivin and increased pro-apoptotic proteins Bax, γH2AX). Topoisomerase I inhibitor 17 also prevents the progression of the G2/M checkpoint and induces cell cycle arrest. Topoisomerase I inhibitor 17 significantly inhibits the ability of colorectal cancer cells to form colonies and migrate. Topoisomerase I inhibitor 17 effectively reduces tumors in mice bearing human PDX tumors.
Biological Activity I Assay Protocols (From Reference)
Targets
Bax Bcl-2 Top1 XIAP
ln Vitro
Topoisomerase I inhibitor 17 (5-500 nM, 72 h) has antiproliferative effects on four cancer cells (HepG2, A549, HeLa and HCT116) with IC50 values of 136.6, 33.7, 72.9 and 36.1 nM, respectively[1]. Topoisomerase I inhibitor 17 can cross the Caco-2 cell monolayer with an apparent permeability coefficient of 2.24 μcm/s from the apical to the basolateral side (0.5-1.0 μM, 4 h), and the survival rate of Caco-2 cells is over 90% (0.2-1.0 μM, 4 h)[1]. Topoisomerase I inhibitor 17 (5-100 nM, 12-72 h) significantly inhibited proliferation-induced colony formation, concentration-dependently inhibited HCT116 cell migration, and increased ROS generation [1]. Topoisomerase I inhibitor 17 (0-50 μM, 48 h) induces apoptosis and cell cycle arrest in HCT116 cells in a dose-dependent manner, preventing progression of the G2/M checkpoint [1]. Topoisomerase I inhibitor 17 inhibits DDX5 expression in HCT116 cells (100 μM, 48-72 h) and relieves DDX5-blocked Top1 activity (5 and 50 μM)[1].
ln Vivo
Topoisomerase I inhibitor 17 (2-15 mg/kg, ip, once a week for 4 weeks) effectively reduces tumors in mice bearing human colon cancer PDX tumors through a concentration-dependent tumor inhibition effect and acceptable toxicity [1].
Cell Assay
Cell Cycle Analysis[1]
Cell Types: HCT116 Tested
Tested Concentrations: 0, 2.5, 10, 50 nM
Incubation Duration: 48 h
Experimental Results: Halted the progression of the G2/M checkpoint, Experimental Experimental Resultsed in a significant accumulation of cells at this critical pre-division stage, with increases in cell number observed at G2/M phases of 2.05% (0 nM), 33.48% (2.5 nM), 55.28% (5 nM) and 64.01% (10 nM), respectively.

Apoptosis Analysis[1]
Cell Types: HCT116 Tested
Tested Concentrations: 50, 100 nM
Incubation Duration: 72 h
Experimental Results: Reduced expression of anti-apoptotic proteins (e.g. Survivin). Upregulated the pro-apoptotic proteins Bax and γH2AX in a dose-dependent manner.
Animal Protocol
Animal/Disease Models: FL118 colorectal cancer (CRC) patient-derived xenograft (PDX) tumors models using a limited number of severe combined immunodeficiency (SCID) mice[1]
Doses: 2, 8 and 15 mg/kg
Route of Administration: Intraperitoneal injection (i.p.)
Experimental Results: Regressed CRC PDX27454 tumors after 21 days with no recurrence within 35 days through a concentration-dependent tumor-suppressive effect and acceptable toxicity at 15 mg/kg. Displayed stable mouse body weights.
References

[1]. Design, synthesis and investigation of biological activity and mechanism of fluoroaryl-substituted derivatives at the FL118 position 7. European journal of medicinal chemistry. 2024, 283, 117143.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C28H21FN2O7
Molecular Weight
516.47
CAS #
2413582-45-1
Appearance
Typically exists as solids at room temperature
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9362 mL 9.6811 mL 19.3622 mL
5 mM 0.3872 mL 1.9362 mL 3.8724 mL
10 mM 0.1936 mL 0.9681 mL 1.9362 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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