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(Rac)-XL177A

Cat No.:V103201 Purity: ≥98%
(Rac)-XL177A is the racemic isomer of XL177A.
(Rac)-XL177A
(Rac)-XL177A Chemical Structure CAS No.: 2417089-73-5
Product category: Deubiquitinase
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes

Other Forms of (Rac)-XL177A:

  • XL177A
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
(Rac)-XL177A is the racemic isomer of XL177A. XL177A is a highly potent and selective irreversible USP7 inhibitor with IC50 of 0.34 nM. XL177A induces cancer cell-killing effects through a p53-dependent mechanism.
(Rac)-XL177A is the racemic isomer of XL177A, a highly potent and selective, irreversible small-molecule inhibitor of the deubiquitinating enzyme Ubiquitin-Specific Protease 7 (USP7). USP7 is a key regulator of the tumor suppressor protein p53 and other cellular proteins. This research compound is used to study the role of USP7 and the p53 pathway in cancer biology, as it elicits cancer cell-killing effects through a p53-dependent mechanism.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of XL177A is the deubiquitinating enzyme Ubiquitin-Specific Protease 7 (USP7). USP7 is also known as Herpesvirus-associated ubiquitin-specific protease (HAUSP). By irreversibly inhibiting USP7, the compound prevents the deubiquitination of its substrates, including p53. As a result, p53 levels are stabilized, leading to the activation of p53-dependent cell cycle arrest and apoptosis.
ln Vitro
XL177A, the parent compound of (Rac)-XL177A, is a highly potent and selective irreversible inhibitor of USP7, with an IC50 value of 0.34 nM. It is a strong conjugator of USP7, which stabilizes p53 in cells. The primary mechanism by which XL177A reduces insulin growth is through p53 oscillation. In the human proteome and DUBome, it demonstrates remarkable selectivity for USP7 over other deubiquitinases.
ln Vivo
In vivo, XL177A, the parent compound, elicits cancer cell-killing effects through a p53-dependent mechanism. While specific in vivo protocols are not detailed in the provided summaries, the compound's design as a potent and selective inhibitor suggests its utility in mouse xenograft models of p53 wild-type cancers. By administering (Rac)-XL177A, researchers can evaluate the antitumor efficacy of USP7 inhibition and study the resulting activation of the p53 pathway.
Enzyme Assay
No specific USP7 enzyme assay protocol is described. A typical USP7 inhibition assay: The reaction buffer contains 50 mM Tris-HCl (pH 8.0), 0.5 mM EDTA, 5 mM DTT, 0.01% (v/v) Igepal CA-630, and 0.1 mg/mL BSA. Recombinant USP7 enzyme (0.5-1 nM) is incubated with varying concentrations of the test compound (0.001-1000 nM) for 30 minutes at room temperature. The reaction is initiated by adding the fluorogenic Ubiquitin-Rhodamine 110 substrate (100 nM). Fluorescence (Ex 485 nm, Em 535 nm) is monitored for 60 minutes. The IC50 is calculated from the reaction progress curves.
Cell Assay
A standard cell viability protocol for USP7 inhibitors: p53 wild-type cancer cells (e.g., HCT116 colon cancer cells) are seeded in 96-well plates in McCoy's 5A medium + 10% FBS. The following day, cells are treated with (Rac)-XL177A at concentrations ranging from 0.0001 to 10 uM for 72 hours. Cell viability is measured using the CellTiter-Glo luminescent assay. Apoptosis can be assessed by Western blot for cleaved PARP and cleaved caspase-3. p53 levels are measured by Western blot to confirm target engagement.
Animal Protocol
No in vivo animal protocol was found for (Rac)-XL177A. A general protocol for evaluating USP7 inhibitors in vivo involves establishing subcutaneous xenografts of p53 wild-type cancer cells (e.g., 5×10⁶ HCT116 cells) in the flanks of nude mice. When tumors reach an average volume of 150-200 mm3, mice are randomized (n=8-10 per group) to receive (Rac)-XL177A (e.g., 30 mg/kg, oral or IP) or vehicle daily for 21 days. Tumor volume is measured twice weekly using calipers. Tumor growth inhibition (TGI) is calculated.
ADME/Pharmacokinetics
No PK data was found for (Rac)-XL177A. As a racemic mixture, its PK may differ from the pure enantiomer. For the parent compound XL177A, which is an irreversible covalent inhibitor, the PK is characterized by a short half-life in circulation but prolonged target engagement (due to the covalent bond). It is likely metabolized by liver enzymes and eliminated.
Toxicity/Toxicokinetics
No toxicity data was found for (Rac)-XL177A. Given that it is a potent USP7 inhibitor, its toxicity would likely be related to its on-target activity: stabilization of p53 leading to cell cycle arrest and apoptosis. This could result in significant toxicities to rapidly dividing tissues (e.g., bone marrow, gastrointestinal tract) and potential teratogenic effects.
References

[1]. Selective USP7 inhibition elicits cancer cell killing through a p53-dependent mechanismJ. Scientific reports, 2020, 10(1): 5324.

Additional Infomation
(Rac)-XL177A is a research-grade chemical for laboratory use only. Its CAS number is 2417089-73-5, molecular formula is C48H57ClN8O5, and molecular weight is 861.47. It is the racemic isomer of the highly specific USP7 inhibitor XL177A. The compound is intended for non-clinical research in cancer biology and is not for human use. Purity is reported as 98% by HPLC. Each product in one row, fields tab-separated.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C48H57CLN8O5
Molecular Weight
861.47
Exact Mass
860.414
CAS #
2417089-73-5
Related CAS #
XL177A;2417089-74-6
PubChem CID
152089451
Appearance
Solid powder
Hydrogen Bond Donor Count
3
Rotatable Bond Count
14
Heavy Atom Count
62
Complexity
1560
Defined Atom Stereocenter Count
0
SMILES
CN1CCN(CC1)CCC(=O)NC2=CC3=C(C=C2)C(=O)N(C=N3)CC4(CCN(CC4)C(=O)C(CCCNC(=O)C5=CC6=C(C=C5)C(=C7CCCCC7=N6)Cl)CC8=CC=CC=C8)O
InChi Key
UYJWYMWIVMCGQZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C48H57ClN8O5/c1-54-24-26-55(27-25-54)21-17-43(58)52-36-14-16-39-41(30-36)51-32-57(47(39)61)31-48(62)18-22-56(23-19-48)46(60)35(28-33-8-3-2-4-9-33)10-7-20-50-45(59)34-13-15-38-42(29-34)53-40-12-6-5-11-37(40)44(38)49/h2-4,8-9,13-16,29-30,32,35,62H,5-7,10-12,17-28,31H2,1H3,(H,50,59)(H,52,58)
Chemical Name
N-[4-benzyl-5-[4-hydroxy-4-[[7-[3-(4-methylpiperazin-1-yl)propanoylamino]-4-oxoquinazolin-3-yl]methyl]piperidin-1-yl]-5-oxopentyl]-9-chloro-5,6,7,8-tetrahydroacridine-3-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~70 mg/mL (~81.26 mM; with ultrasonication)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.1608 mL 5.8040 mL 11.6081 mL
5 mM 0.2322 mL 1.1608 mL 2.3216 mL
10 mM 0.1161 mL 0.5804 mL 1.1608 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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