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Nonacosane

Cat No.:V34500 Purity: ≥98%
Nonacosane, extracted from Baphia massaiensis, is weakly active against Escherichia coli, Bacillus subtilis, Pseudomonas aeruginosa, and Staphylococcus aureus.
Nonacosane
Nonacosane Chemical Structure CAS No.: 630-03-5
Product category: Natural Products
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Nonacosane, extracted from Baphia massaiensis, is weakly active against Escherichia coli, Bacillus subtilis, Pseudomonas aeruginosa, and Staphylococcus aureus.
Biological Activity I Assay Protocols (From Reference)
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
This report describes a novel human disease characterized by the accumulation of long-chain n-alkanes from plants in the internal organs. Lipid analysis of tissues from a suddenly deceased adult male with diffuse visceral granuloma containing lipophilic crystalline material revealed the presence of anomalous compounds identified as long-chain n-alkanes containing 29 carbon atoms (n-nonacosane), 31 carbon atoms (n-hexadecane), and 33 carbon atoms (n-trisane). The distribution of n-alkanes in the patient's tissues showed that these compounds primarily accumulated in the lumbar aortic lymph nodes, adrenal glands, lungs (highest concentration in pulmonary granulomas), and liver; significantly lower concentrations were detected in the myocardium and kidneys, and none were detected in brain tissue. Based on the structural composition and tissue distribution of the accumulated n-alkanes, this article explores their dietary (plant) sources and the pathophysiological mechanisms of storage. Arthrobacter nana KCC B35, isolated from densely covered cyanobacterial mats on oil deposits along the Arabian Gulf coast, exhibits excellent growth using C10 to C40 n-alkanes as its sole carbon and energy source. Its growth on C20 to C40 alkanes is even superior to that on C10 to C18 alkanes. After co-culturing biomass samples with n-octacosane (C28) or n-nonacosane (C29) for 6 hours, these compounds became the major constituent alkanes of the cellular hydrocarbon composition. Even-chain hexadecane (C16) and odd-chain pentadecane (C15) were the second-largest constituent alkanes in C28 and C29 cultured cells, respectively. Compared to control cells not incubated with hydrocarbon compounds, cells incubated with n-hexadecane accumulated a higher proportion of C16 fatty acids in their lipids. On the other hand, no fatty acids of the same chain length were detected in cells incubated with C28 and C29, but the fatty acid profiles of the cellular lipids suggest that these ultra-long-chain alkanes may have undergone medium-chain oxidation. This activity makes the tobacco nitrogen-fixing bacterium KCC B35 suitable for use in mixed formulations for the bioremediation of environments contaminated by heavy oil deposits.
Toxicity/Toxicokinetics
Toxicity Summary
Identification and Uses: Nonacosane is a higher n-alkane containing 29 carbon atoms (C29). Human Exposure and Toxicity: A case report describes a human illness characterized by the accumulation of long-chain n-alkanes from plants in the viscera of patients. Diffuse visceral granulomas contained lipophilic crystalline substances, indicating the presence of long-chain n-alkanes, including nonacosane. Studies of the distribution of n-alkanes in patient tissues showed significant accumulation in the lumbar aortic lymph nodes, adrenal glands, lungs, and liver; significantly lower levels were detected in the myocardium and kidneys, while no levels were detected in brain tissue. Animal Studies: Nonacosane can cause "paraffin liver" in cattle. The abnormal substance was found in very high levels in the bovine liver, indicating low toxicity and clearly due to long-term accumulation.
References

[1]. A New 3-Prenyl-2-flavene and Other Extractives from Baphia massaiensis and Their Antimicrobial Activities. Natural Product Communications.

Additional Infomation
Nonacosane is a straight-chain alkane consisting of 29 carbon atoms. It is a plant metabolite and a component of volatile oils. It has been reported to exist in Vanilla madagascariensis, Echinacea angustifolia, and other organisms with relevant data. See also: Moringa leaf oil (partial).
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C29H60
Molecular Weight
408.7867
Exact Mass
408.47
CAS #
630-03-5
PubChem CID
12409
Appearance
White to off-white solid
Density
0.805g/cm3
Boiling Point
286 °C15 mm Hg(lit.)
Melting Point
63-66 °C(lit.)
Flash Point
291.2ºC
Index of Refraction
1.45
LogP
11.558
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
0
Rotatable Bond Count
26
Heavy Atom Count
29
Complexity
231
Defined Atom Stereocenter Count
0
SMILES
C([H])([H])(C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H]
InChi Key
IGGUPRCHHJZPBS-UHFFFAOYSA-N
InChi Code
InChI=1S/C29H60/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h3-29H2,1-2H3
Chemical Name
nonacosane
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMF :< 1 mg/mL
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.4462 mL 12.2312 mL 24.4624 mL
5 mM 0.4892 mL 2.4462 mL 4.8925 mL
10 mM 0.2446 mL 1.2231 mL 2.4462 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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