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(Rac)-Lonafarnib (Sch-66336 racemate)

Alias: Lonafarnib (Racemate); 193275-86-4; 4-{2-[4-(3,10-DIBROMO-8-CHLORO-6,11-DIHYDRO-5H-BENZO[5,6]CYCLOHEPTA[1,2-B]PYRIDIN-11-YL)PIPERIDIN-1-YL]-2-OXOETHYL}PIPERIDINE-1-CARBOXAMIDE; 4-(2-(4-(8-Chloro-3,10-dibromo-6,11-dihydro-5H-benzo(5,6)cyclohepta(1,2-b)pyridin-11-yl)-1-piperidinyl)-2-oxoethyl)-1-piperidinecarboxamide; SCHEMBL94653; BDBM14433; CHEBI:90678; DTXSID90870198;
Cat No.:V51477 Purity: ≥98%
(Rac)-Lonafarnib (Sch66336 racemate) is the racemate of Lonafarnib.
(Rac)-Lonafarnib (Sch-66336 racemate)
(Rac)-Lonafarnib (Sch-66336 racemate) Chemical Structure CAS No.: 193275-86-4
Product category: Farnesyl Transferase
This product is for research use only, not for human use. We do not sell to patients.
Size Price
500mg
1g
Other Sizes

Other Forms of (Rac)-Lonafarnib (Sch-66336 racemate):

  • Lonafarnib
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
(Rac)-Lonafarnib (Sch66336 racemate) is the racemate of Lonafarnib. Lonafarnib is a potent and active farnesyl protein transferase (FPTase) kinase for H-ras, K-ras and N-ras with IC50 of 1.9 nM, 5.2 nM and 2.8 nM respectively. Lonafarnib has activity against San Diego delta virus (HDV)
Biological Activity I Assay Protocols (From Reference)
Targets
H-ras (IC50 = 1.9 nM); K-ras (IC50 = 5.2 nM); N-ras (IC50 = 2.8 nM)[1]
ln Vivo
We have been developing a series of nonpeptidic, small molecule farnesyl protein transferase inhibitors that share a common tricyclic nucleus and compete with peptide/protein substrates for binding to farnesyl protein transferase. Here, we report on pharmacological and in vivo studies with SCH 66336, a lead compound in this structural class. SCH 66336 potently inhibits Ha-Ras processing in whole cells and blocks the transformed growth properties of fibroblasts and human tumor cell lines expressing activated Ki-Ras proteins. The anchorage-independent growth of many human tumor lines that lack an activated ras oncogene is also blocked by treatment with SCH 66336. In mouse, rat, and monkey systems, SCH 66336 has excellent oral bioavailability and pharmacokinetic properties. In the nude mouse, SCH 66336 demonstrated potent oral activity in a wide array of human tumor xenograft models including tumors of colon, lung, pancreas, prostate, and urinary bladder origin. Enhanced in vivo efficacy was observed when SCH 66336 was combined with various cytotoxic agents (cyclophosphamide, 5-fluorouracil, and vincristine). In a Ha-Ras transgenic mouse model, prophylactic treatment with SCH 66336 delayed tumor onset, reduced the average number of tumors/mouse, and reduced the average tumor weight/animal. In a therapeutic mode in which gavage treatment was initiated after the transgenic mice had developed palpable tumors, significant tumor regression was induced by SCH 66336 in a dose-dependent fashion. This was associated with increased apoptosis and decreased DNA synthesis in tumors of animals treated with SCH 66336. Enhanced efficacy was also observed in this model when SCH 66336 was combined with cyclophosphamide. SCH 66336 is presently being evaluated in Phase I clinical trials[1].
ADME/Pharmacokinetics
Absorption
The absolute oral bioavailability of lonafarnib is unknown; in healthy subjects, the mean peak plasma concentrations (%CV) of 75 mg or 100 mg lonafarnib twice daily were 834 (32%) and 964 (32%) ng/mL, respectively. In patients with HGPS, the median tmax of 115 mg/m2 lonafarnib twice daily was 2 hours (range 0–6 hours), the mean Cmax was 1777 ± 1083 ng/mL, the mean AUC0–8hr was 9869 ± 6327 nghr/mL, and the mean AUCtau was 12365 ± 9135 nghr/mL. At a dose of 150 mg/m², the corresponding values were: 4 hours (range 0–12 hours), 2695 ± 1090 ng/mL, 16020 ± 4978 nghr/mL, and 19539 ± 6434 nghr/mL. Following a single oral dose of 75 mg lonafabric in healthy subjects, compared to the fasting state, a high-fat meal and a low-fat meal reduced lonafabric's Cmax by 55% and 25%, respectively, and AUC by 29% and 21%, respectively.
Elimination Pathway
Within 240 hours after oral administration of 104 mg [14C]-lonafabric in fasting healthy subjects, approximately 62% and <1% of the initial radiolabeled dose were recovered from feces and urine, respectively. The two most common metabolites were the active metabolites HM21 and HM17, accounting for 14% and 15% of plasma radioactivity, respectively.
Volume of Distribution
In healthy subjects, the steady-state apparent volume of distribution was 97.4 L and 87.8 L, respectively, after twice-daily administration of 75 mg or 100 mg lonafab.
Metabolism/Metabolites
Lonafab is primarily metabolized in vitro via CYP3A4/5, and partially via CYP1A2, CYP2A6, CYP2C8, CYP2C9, CYP2C19, and CYP2E1. The formation of the major metabolite involves the oxidation of the piperidine ring and subsequent dehydration.
Biological Half-Life
The mean half-life of lonafab after twice-daily oral administration of 100 mg twice-daily in healthy subjects is approximately 4–6 hours.
Toxicity/Toxicokinetics
Hepatotoxicity
In a small premarketing clinical trial in children with progeria, 35% of subjects treated with lonafabric acid experienced elevated serum transaminases, but these were usually mild and resolved spontaneously; only 5% of subjects had transaminase levels exceeding three times the upper limit of normal (ULN). No serious liver-related adverse events occurred, and no patients experienced simultaneous elevations in both serum transaminases and bilirubin. Since lonafabric acid's approval, there have been no published reports of drug-induced liver injury related to its use, although clinical experience with the drug, particularly long-term treatment, is limited.
Probability Score: E (Rare, unproven but suspected cause of clinically significant liver injury).
Protein Binding
Lonafabric acid has an in vitro plasma protein binding rate of ≥99% at concentrations ranging from 0.5 to 40.0 μg/mL.
References

[1]. Antitumor activity of SCH 66336, an orally bioavailable tricyclic inhibitor of farnesyl protein transferase, in human tumor xenograft models and wap-ras transgenic mice. Cancer Res. 1998 Nov 1;58(21):4947-56.

Additional Infomation
4-{2-[4-(3,10-dibromo-8-chloro-6,11-dihydro-5H-benzo[5,6]cycloheptano[1,2-b]pyridin-11-yl)piperidin-1-yl]-2-oxoethyl}piperidin-1-carboxamide is a benzocycloheptanopyridine, specifically a benzo[5,6]cycloheptano[1,2-b]pyridine with bromine substitution at positions 3 and 10, chlorine substitution at position 8, and N-acetylpiperidin-4-yl substitution at position 11, wherein one hydrogen atom of the acetyl group is substituted with 1-carbamoylpiperidin-4-yl. It is a benzocycloheptanopyridine, N-acylpiperididine, heteroarylpiperididine, organochlorine compound, organobromine compound, and also a member of the urea class of compounds.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C27H31BR2CLN4O2
Molecular Weight
638.821644067764
Exact Mass
636.05
Elemental Analysis
C, 50.76; H, 4.89; Br, 25.02; Cl, 5.55; N, 8.77; O, 5.01
CAS #
193275-86-4
Related CAS #
Lonafarnib;193275-84-2
PubChem CID
9852353
Appearance
Typically exists as solid at room temperature
Density
1.5±0.1 g/cm3
Boiling Point
710.4±70.0 °C at 760 mmHg
Flash Point
383.5±35.7 °C
Vapour Pressure
0.0±2.3 mmHg at 25°C
Index of Refraction
1.630
LogP
5.03
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
3
Heavy Atom Count
36
Complexity
790
Defined Atom Stereocenter Count
0
SMILES
BrC1=CC(=CC2CCC3=CC(=CN=C3[C@@H](C=21)C1CCN(C(CC2CCN(C(N)=O)CC2)=O)CC1)Br)Cl
InChi Key
DHMTURDWPRKSOA-UHFFFAOYSA-N
InChi Code
InChI=1S/C27H31Br2ClN4O2/c28-20-12-19-2-1-18-13-21(30)14-22(29)24(18)25(26(19)32-15-20)17-5-9-33(10-6-17)23(35)11-16-3-7-34(8-4-16)27(31)36/h12-17,25H,1-11H2,(H2,31,36)
Chemical Name
4-[2-[4-(6,15-dibromo-13-chloro-4-azatricyclo[9.4.0.03,8]pentadeca-1(11),3(8),4,6,12,14-hexaen-2-yl)piperidin-1-yl]-2-oxoethyl]piperidine-1-carboxamide
Synonyms
Lonafarnib (Racemate); 193275-86-4; 4-{2-[4-(3,10-DIBROMO-8-CHLORO-6,11-DIHYDRO-5H-BENZO[5,6]CYCLOHEPTA[1,2-B]PYRIDIN-11-YL)PIPERIDIN-1-YL]-2-OXOETHYL}PIPERIDINE-1-CARBOXAMIDE; 4-(2-(4-(8-Chloro-3,10-dibromo-6,11-dihydro-5H-benzo(5,6)cyclohepta(1,2-b)pyridin-11-yl)-1-piperidinyl)-2-oxoethyl)-1-piperidinecarboxamide; SCHEMBL94653; BDBM14433; CHEBI:90678; DTXSID90870198;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.5654 mL 7.8269 mL 15.6539 mL
5 mM 0.3131 mL 1.5654 mL 3.1308 mL
10 mM 0.1565 mL 0.7827 mL 1.5654 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT02527707 Completed Has Results Drug: lonafarnib
Drug: Ritonavir
Chronic Delta Hepatitis Eiger BioPharmaceuticals September 2015 Phase 2
NCT02579044 Enrolling by invitation Drug: Everolimus and lonafarnib Progeria Boston Children's Hospital December 2015 Phase 1
Phase 2
NCT05229991 Active, not recruiting Drug: Lonafarnib
Drug: Ritonavir
Hepatitis D, Chronic Soroka University Medical Center May 15, 2021 Phase 3
NCT00773474 Terminated Has Results Drug: Lonafarnib Metastatic Breast Cancer George Sledge October 2008 Phase 2
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