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RA375

Cat No.:V53372 Purity: ≥98%
RA375 is an inhibitor (blocker/antagonist) of RPN13 (26S proteasome subunit).
RA375
RA375 Chemical Structure CAS No.: 2649154-57-2
Product category: Apoptosis
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
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Product Description
RA375 is an inhibitor (blocker/antagonist) of RPN13 (26S proteasome subunit). RA375 activates UPR signaling, ROS production, and apoptosis. The anti-tumor activity of RA375 is 10 times that of RA190.
RA375 is an inhibitor of the 26S proteasome subunit RPN13. It activates unfolded protein response (UPR) signaling, generates reactive oxygen species (ROS), and induces apoptosis in cancer cells. RA375 exhibits ten-fold greater activity against cancer lines than RA190, reflecting its nitro ring substituents and the addition of a chloroacetamide warhead.
Biological Activity I Assay Protocols (From Reference)
Targets
RA375 targets RPN13 (ADRM1), a regulatory subunit of the 26S proteasome. RPN13 is involved in the recognition and deubiquitination of ubiquitinated proteins targeted for degradation. By inhibiting RPN13, RA375 disrupts proteasome function, leading to the accumulation of ubiquitinated proteins, activation of UPR signaling, ROS production, and apoptosis in cancer cells.
ln Vitro
RA375 demonstrates potent in vitro activity against cancer cell lines. It activates UPR signaling and generates ROS in cancer cells. The compound's anti-tumor activity is ten-fold higher than that of RA190. These activities make RA375 a valuable tool for studying proteasome inhibition and cancer cell death pathways.
ln Vivo
In mice, RA375 (10 mg/kg, ip) decreases the burden of ovarian tumors via inhibiting proteasome function[1].
In vivo activity of RA375 has been demonstrated in animal models. An animal protocol reports that RA375 (10 mg/kg, intraperitoneal) inhibits proteasome activity in vivo. The compound's potent anti-tumor activity suggests potential for efficacy in tumor-bearing mouse models. Further in vivo studies are needed to fully characterize its antitumor efficacy and safety profile.
Enzyme Assay
In vitro enzyme assays for RA375 involve measuring its inhibition of RPN13 function or proteasome activity. Proteasome activity can be assessed using fluorogenic peptide substrates that are cleaved by the proteasome. Inhibition of RPN13-mediated deubiquitination can be measured using ubiquitin-AMC substrates. IC50 values can be determined from dose-response curves.
Cell Assay
In vitro cellular assays for RA375 involve treating cancer cell lines with varying concentrations of the compound and measuring cell viability using MTT or other assays. UPR signaling activation is assessed by measuring markers such as CHOP or BiP. ROS production is measured using fluorescent probes such as DCFH-DA. Apoptosis is evaluated by Annexin V staining or caspase activity assays.
Animal Protocol
Animal/Disease Models: RA375 (10 mg/kg, ip) inhibits proteasome function and reduces ovarian tumor burden in mice[1].
Doses: 10 mg/kg.
Route of Administration: IP for a 5 days on, 2 days off cycle for two weeks.
Experimental Results: diminished ovarian tumor burden in mice.

Animal/Disease Models: Female balb/c (Bagg ALBino) mouse:[1].
Doses: 5, 10, 20, 40, 60, 100 mg/kg (Pharmacological Analysis).
Route of Administration: IP single dose.
Experimental Results: The dose of 40 mg/kg on alternate days for two weeks produced no observable toxicities or weight loss.
In vivo animal experiments for RA375 involve administering the compound (e.g., 10 mg/kg, intraperitoneal) to tumor-bearing mouse models. Efficacy is evaluated by measuring tumor growth inhibition, survival rates, and biomarker changes such as UPR activation and apoptosis markers. The compound's pharmacokinetic properties and tissue distribution are also assessed.
ADME/Pharmacokinetics
Pharmacokinetic data for RA375 are limited. The compound is soluble in DMSO. An animal protocol indicates intraperitoneal administration at 10 mg/kg. Its absorption, distribution, metabolism, and excretion properties have not been fully characterized. Further pharmacokinetic studies are needed to determine its bioavailability and half-life.
Toxicity/Toxicokinetics
Toxicological data for RA375 are limited. As a potent proteasome inhibitor, the compound may have potential for off-target effects at higher concentrations. The compound is intended for research use only and is not for human therapeutic application. Standard laboratory safety precautions should be followed when handling this compound.
References

[1]. Structure-function Analyses of Candidate Small Molecule RPN13 Inhibitors With Antitumor Properties. PLoS One. 2020 Jan 15;15(1):e0227727.

Additional Infomation
RA375 (CAS#: 2649154-57-2) has the molecular formula C30H25ClN4O7 and a molecular weight of 589.00. The compound is a RPN13 inhibitor that activates UPR signaling, generates ROS, and induces apoptosis. It exhibits ten-fold greater activity than RA190. Purity is ≥98%.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C30H25CLN4O7
Molecular Weight
588.995106458664
Exact Mass
588.141
CAS #
2649154-57-2
PubChem CID
146681207
Appearance
Light yellow to yellow solid powder
LogP
4.7
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
7
Heavy Atom Count
42
Complexity
1020
Defined Atom Stereocenter Count
1
SMILES
C\1N(C/C(=C\C2=CC=C(C=C2)[N+](=O)[O-])/C(=O)/C1=C/C3=CC=C(C=C3)[N+](=O)[O-])C(=O)[C@@H](NC(=O)CCl)CC4=CC=CC=C4
InChi Key
REFAVUFYPFWJGH-SWAPHQFDSA-N
InChi Code
InChI=1S/C30H25ClN4O7/c31-17-28(36)32-27(16-20-4-2-1-3-5-20)30(38)33-18-23(14-21-6-10-25(11-7-21)34(39)40)29(37)24(19-33)15-22-8-12-26(13-9-22)35(41)42/h1-15,27H,16-19H2,(H,32,36)/b23-14+,24-15+/t27-/m0/s1
Chemical Name
N-[(2S)-1-[(3E,5E)-3,5-bis[(4-nitrophenyl)methylidene]-4-oxopiperidin-1-yl]-1-oxo-3-phenylpropan-2-yl]-2-chloroacetamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 100 mg/mL (169.78 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.6978 mL 8.4890 mL 16.9779 mL
5 mM 0.3396 mL 1.6978 mL 3.3956 mL
10 mM 0.1698 mL 0.8489 mL 1.6978 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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