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Ibuzatrelvir (PF-07817883)

Cat No.:V54410 Purity: ≥98%
Ibuzatrelvir (PF-07817883) is an antiviral compound that targets the SARS-CoV-2 3CL protease.
Ibuzatrelvir (PF-07817883)
Ibuzatrelvir (PF-07817883) Chemical Structure CAS No.: 2755812-39-4
Product category: SARS-CoV
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
Other Sizes
Official Supplier of:
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Product Description
Ibuzatrelvir (PF-07817883) is an antiviral compound that targets the SARS-CoV-2 3CL protease. Ibuzatrelvir may be utilized to suppress COVID-19.
Ibuzatrelvir (CAS 2755812-39-4) is an orally bioavailable, second-generation inhibitor of the SARS-CoV-2 main protease (Mpro; 3C-like protease; 3CLpro; nsp5 protease). Its molecular formula is C21H30F3N5O5 with a molecular weight of 489.49 g/mol. Also known as PF-07817883, Ibuzatrelvir has improved metabolic stability compared to first-generation inhibitors. It is being developed for the treatment of COVID-19.
Biological Activity I Assay Protocols (From Reference)
Targets
SARS-CoV-2 3CL protease, COVID-19[1]
Ibuzatrelvir targets the SARS-CoV-2 main protease (Mpro, also known as 3CLpro or nsp5 protease). Mpro is a cysteine protease essential for viral polyprotein processing and is a validated target for antiviral therapy. By inhibiting Mpro, Ibuzatrelvir prevents the cleavage of viral polyproteins into functional proteins, thereby blocking viral replication. The compound is a second-generation inhibitor with improved metabolic stability.
ln Vitro
In cell-free biochemical systems, Ibuzatrelvir inhibits the SARS-CoV-2 main protease (Mpro/3CLpro). The compound's inhibition of Mpro can be assessed using fluorogenic substrates that are cleaved by the protease. The compound demonstrates significant efficacy in inhibiting viral replication in biochemical assays.
ln Vivo
In cell-based assays, Ibuzatrelvir inhibits SARS-CoV-2 replication in infected cells. The compound's antiviral activity is assessed by measuring viral replication using qRT-PCR or plaque assays. Ibuzatrelvir shows promise in reducing the severity and duration of respiratory viral infections. It is an antiviral compound designed to inhibit the SARS-CoV-2 3CL protease.
Enzyme Assay
The cell-free assay for Mpro inhibition involves measuring the enzymatic activity of purified SARS-CoV-2 main protease in the presence of the compound. The assay uses a fluorogenic peptide substrate that is cleaved by Mpro, releasing a fluorescent signal. The compound is incubated with the enzyme and substrate, and the fluorescence is measured over time. The IC50 is determined from dose-response curves.
Cell Assay
Cell-based assays for Ibuzatrelvir involve culturing SARS-CoV-2-infected cells and treating them with the compound at concentrations ranging from 0.001 to 10 μM. Antiviral activity is assessed by measuring viral replication using qRT-PCR or by measuring viral protein expression. Cell viability is assessed using MTT or CCK-8 assays. The compound's ability to inhibit viral replication is determined from dose-response curves.
Animal Protocol
In animal models, Ibuzatrelvir has been evaluated for its antiviral activity against SARS-CoV-2. Typical studies involve oral administration of the compound to virus-infected mice or other animal models. Viral load in tissues, inflammatory markers, and survival are assessed. The compound's oral bioavailability and improved metabolic stability support its efficacy in vivo.
ADME/Pharmacokinetics
Ibuzatrelvir exhibits favorable pharmacokinetic properties including oral bioavailability and improved metabolic stability. The compound is orally bioavailable and achieves therapeutic concentrations in tissues. Detailed pharmacokinetic parameters including plasma half-life, clearance, and volume of distribution have been reported in preclinical studies. The compound's improved metabolic stability supports once-daily dosing.
Toxicity/Toxicokinetics
Ibuzatrelvir is an investigational compound and its toxicity profile is being evaluated in preclinical studies. As a protease inhibitor, potential toxicities include effects on host proteases and off-target effects. Standard toxicology studies in animal models are conducted to determine the maximum tolerated dose, target organ toxicity, and safety profile. The compound's improved metabolic stability may also improve its safety profile.
References

[1]. Preparation of peptidomimetic nitriles as SARS-CoV-2 3CL protease inhibitors and methods for the treatment of COVID-19. World Intellectual Property Organization, WO2021250648 A1. 2021-12-16.

[2]. Virologic Response and Safety After Oral Administration of Ibuzatrelvir, a Novel SARS-CoV-2 Mpro Inhibitor, in Non-Hospitalized Adults With Symptomatic COVID-19. European Congress of Clinical Microbiology and Infectious Disease (ECCMID) 2024; 2024 April 27-30.

[3]. An orally bioavailable SARS-CoV-2 main protease inhibitor exhibits improved affinity and reduced sensitivity to mutations. Sci Transl Med. 2024 Mar 13;16(738):eadi0979.

[4]. A Second-Generation Oral SARS-CoV-2 Main Protease Inhibitor Clinical Candidate for the Treatment of COVID-19. J Med Chem. 2024 Apr 30.

Additional Infomation
Ibuzatrelvir is an investigational compound being developed for the treatment of COVID-19. It is a second-generation, orally bioavailable inhibitor of the SARS-CoV-2 main protease (Mpro/3CLpro) with improved metabolic stability. Clinical trials have been conducted or are planned to evaluate its safety and efficacy. The compound is not yet approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H30F3N5O5
Molecular Weight
489.488615512848
Exact Mass
489.219
CAS #
2755812-39-4
PubChem CID
163362000
Appearance
White to off-white solid powder
LogP
1.7
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
9
Rotatable Bond Count
8
Heavy Atom Count
34
Complexity
863
Defined Atom Stereocenter Count
5
SMILES
CC(C)(C)[C@@H](C(=O)N1C[C@@H](C[C@H]1C(=O)N[C@@H](C[C@@H]2CCNC2=O)C#N)C(F)(F)F)NC(=O)OC
InChi Key
WGNWEPPRWQKSKI-AIEDFZFUSA-N
InChi Code
InChI=1S/C21H30F3N5O5/c1-20(2,3)15(28-19(33)34-4)18(32)29-10-12(21(22,23)24)8-14(29)17(31)27-13(9-25)7-11-5-6-26-16(11)30/h11-15H,5-8,10H2,1-4H3,(H,26,30)(H,27,31)(H,28,33)/t11-,12+,13-,14-,15+/m0/s1
Chemical Name
methyl N-[(2S)-1-[(2S,4R)-2-[[(1S)-1-cyano-2-[(3S)-2-oxopyrrolidin-3-yl]ethyl]carbamoyl]-4-(trifluoromethyl)pyrrolidin-1-yl]-3,3-dimethyl-1-oxobutan-2-yl]carbamate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0429 mL 10.2147 mL 20.4294 mL
5 mM 0.4086 mL 2.0429 mL 4.0859 mL
10 mM 0.2043 mL 1.0215 mL 2.0429 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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