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CpG ODN 10101 (ODN 10101)

Cat No.:V53237 Purity: ≥98%
CpG ODN 10101 is a synthetic oligodeoxynucleotide (ODN) that is a Toll-like receptor 9 (TLR9) agonist.
CpG ODN 10101 (ODN 10101)
CpG ODN 10101 (ODN 10101) Chemical Structure CAS No.: 1234402-77-7
Product category: HCV
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
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Product Description
CpG ODN 10101 is a synthetic oligodeoxynucleotide (ODN) that is a Toll-like receptor 9 (TLR9) agonist. CpG ODN 10101 is a potent inducer of cytokine/chemokine expression in vitro when used in combination with HH2 (VQLRIRVAVIRA-NH2). CpG ODN 10101 induces dendritic cells (DCs) to secrete IFN and stimulate B cells. CpG ODN 10101 has antiviral and immunomodulatory properties that may affect chronic HCV (hepatitis C virus) infection.
CpG ODN 10101 (ODN 10101) is a synthetic oligodeoxynucleotide containing unmethylated CpG motifs. It is a Toll-like receptor 9 (TLR9) agonist that activates the innate immune system. CpG ODN 10101 is used as an immunostimulatory agent in research on vaccine adjuvants, cancer immunotherapy, and infectious diseases. It induces the production of pro-inflammatory cytokines and promotes the activation of antigen-presenting cells.
Biological Activity I Assay Protocols (From Reference)
Targets
TLR9
CpG ODN 10101 targets Toll-like receptor 9 (TLR9), which is expressed on plasmacytoid dendritic cells and B cells. TLR9 recognizes unmethylated CpG DNA motifs, which are common in bacterial and viral DNA but rare in vertebrate DNA. Activation of TLR9 by CpG ODN 10101 triggers signaling cascades that lead to the production of pro-inflammatory cytokines and the activation of immune cells.
ln Vitro
CpG ODN 10101 demonstrates potent in vitro immunostimulatory activity. It activates TLR9 signaling, leading to the production of pro-inflammatory cytokines such as IFN-α, IL-6, and TNF-α. The compound promotes the activation and maturation of dendritic cells and B cells. Its activity is assessed in cell-based assays measuring cytokine production and immune cell activation.
ln Vivo
In vivo activity of CpG ODN 10101 has been demonstrated in animal models, where it acts as a potent immunostimulatory agent. It is used as a vaccine adjuvant to enhance immune responses to co-administered antigens. The compound has been studied in models of cancer immunotherapy and infectious diseases.
Enzyme Assay
In vitro enzyme/receptor binding assays for CpG ODN 10101 involve measuring its binding to TLR9 using surface plasmon resonance or other binding assays. TLR9 activation is assessed by measuring downstream signaling events such as NF-κB activation or cytokine production in TLR9-expressing cells.
Cell Assay
In vitro cellular assays for CpG ODN 10101 involve treating TLR9-expressing cells (e.g., plasmacytoid dendritic cells, B cells) with varying concentrations of the oligonucleotide. Cytokine production (e.g., IFN-α, IL-6, TNF-α) is measured using ELISA. Immune cell activation is assessed by measuring cell surface marker expression using flow cytometry.
Animal Protocol
In vivo animal experiments for CpG ODN 10101 involve administering the oligonucleotide to animal models (e.g., mice) to evaluate its immunostimulatory effects. The compound is often used as a vaccine adjuvant, and immune responses to co-administered antigens are measured. Efficacy is assessed by measuring cytokine levels, antibody responses, and immune cell activation.
ADME/Pharmacokinetics
Pharmacokinetic data for CpG ODN 10101 are limited. As an oligonucleotide, its absorption, distribution, metabolism, and excretion properties would be influenced by its size and charge. The compound is typically administered by injection. Its stability and biodistribution are important considerations for its use as an immunostimulatory agent.
Toxicity/Toxicokinetics
Toxicological data for CpG ODN 10101 are limited. As an immunostimulatory agent, it may cause inflammatory responses at high doses. The compound is intended for research use only. Standard laboratory safety precautions should be followed when handling this compound.
References

[1]. A novel vaccine adjuvant comprised of a synthetic innate defence regulator peptide and CpG oligonucleotide links innate and adaptive immunity. Vaccine. 2009 Jul 23;27(34):4662-71.

[2]. Phase 1B, randomized, double-blind, dose-escalation trial of CPG 10101 in patients with chronic hepatitis C virus. Hepatology. 2007 Nov;46(5):1341-9.

Additional Infomation
CpG ODN 10101 (ODN 10101) (CAS#: 1234402-77-7) is a synthetic oligodeoxynucleotide containing unmethylated CpG motifs. It is a TLR9 agonist used as an immunostimulatory agent in research on vaccine adjuvants, cancer immunotherapy, and infectious diseases. It induces pro-inflammatory cytokine production and activates antigen-presenting cells. It is for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Weight
6702.37
CAS #
1234402-77-7
Appearance
White to off-white solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O : ≥ 25 mg/mL (3.73 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.1492 mL 0.7460 mL 1.4920 mL
5 mM 0.0298 mL 0.1492 mL 0.2984 mL
10 mM 0.0149 mL 0.0746 mL 0.1492 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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