yingweiwo

Citric acid-13C3 (citric acid-13C3)

Cat No.:V56324 Purity: ≥98%
Citric acid-13C3 is 13C (carbon 13) labelled Citric acid.
Citric acid-13C3 (citric acid-13C3)
Citric acid-13C3 (citric acid-13C3) Chemical Structure CAS No.: 302912-06-7
Product category: Apoptosis
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes

Other Forms of Citric acid-13C3 (citric acid-13C3):

  • Dimethyl Citric acid
  • Hydroxycitric acid
  • Citric acid-2,4-13C2 (citric acid-2,4-13C2)
  • 2-Methylcitric acid-d3 (Methylcitric acid-d3)
  • Isocitric acid
  • Citric acid
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Top Publications Citing lnvivochem Products
Product Description
Citric acid-13C3 is 13C (carbon 13) labelled Citric acid. Citric acid is a preservative and food additive. Citric acid causes apoptosis in HaCaT cells, and the cell cycle is arrested in the G2/M phase and S phase. Citric acid causes hepatic oxidative damage by reducing antioxidant enzyme activity. Citric acid causes nephrotoxicity in mice.
Citric acid-13C3 is the stable isotope-labeled form of citric acid. The compound is used as an internal standard in analytical chemistry (LC-MS, GC-MS). Citric acid itself is a natural preservative, food tartness enhancer, and a key intermediate in the citric acid cycle (Krebs cycle).
Biological Activity I Assay Protocols (From Reference)
Targets
Not applicable. As a stable isotope-labeled biochemical, this compound has no distinct pharmacological target. It is an analytical standard. Unlabeled citric acid is a metabolic intermediate and chelating agent. This labeled version is used for tracing metabolic pathways, where it is processed by the same enzymes as unlabeled citrate in the Krebs cycle (e.g., citrate synthase, aconitase).
ln Vitro
Drug compounds have included stable heavy isotopes of carbon, hydrogen, and other elements, mostly as quantitative tracers while the drugs were being developed. Because deuteration may have an effect on a drug's pharmacokinetics and metabolic properties, it is a cause for concern [1].
Citric acid induces apoptosis and cell cycle arrest at the G2/M and S phases in HaCaT cells. It also causes oxidative damage in the liver by decreasing the activity of antioxidant enzymes. As a labeled tracer, citric acid-13C3 is expected to behave identically to unlabeled citric acid in these assays, but its biological activity is not the primary focus of its use as a standard.
ln Vivo
Citric acid can cause renal toxicity in mice by decreasing antioxidant enzyme activity. As an internal standard, the 13C-labeled form is used in metabolic flux studies to trace the central carbon metabolism in vivo. It can be administered to animals to follow its incorporation into downstream metabolites like alpha-ketoglutarate, succinate, and malate via LC-MS.
Enzyme Assay
Cellular enzymes and pathways. For cell-free assays, the compound is used as an internal standard in LC-MS/MS. A typical protocol involves preparing a calibration curve of unlabeled citric acid (target analyte) in blank matrix, with a fixed concentration (e.g., 100 ng/mL) of citric acid-13C3 added to each standard, control, and sample. The analyte-to-internal standard peak area ratio is used for quantification. No specific receptor binding studies are applicable.
Cell Assay
For cell culture studies, citric acid-13C3 can be used as a metabolic tracer. HaCaT cells or cancer cell lines are cultured in medium supplemented with 5-25 mM citric acid-13C3 for 1-48 hours. At the end of the experiment, polar metabolites are extracted from the cell pellet using 80% methanol, and the cellular metabolites (citrate, isocitrate, alpha-ketoglutarate) are analyzed by LC-HRMS. The mass shift from the 13C label allows tracking of how citrate is processed in the cell.
Animal Protocol
In metabolic flux studies, citric acid-13C3 is typically administered to mice via intraperitoneal (i.p.) injection (e.g., 100-500 mg/kg) or through the diet. Blood and tissues (liver, kidney) are collected at various time points (15 min to 24 hours). Metabolites are extracted from the samples, and the 13C-labeling pattern in key Krebs cycle intermediates is analyzed by LC-MS/MS or NMR. This allows the calculation of metabolic flux rates through different pathways. Alternatively, it is used in the development of LC-MS/MS methods for the quantification of citrate in biological samples, where it serves as an internal standard to correct for matrix effects and instrument variability.
ADME/Pharmacokinetics
Citric acid-13C3 (labeled with 13C on three carbon atoms) has the same absorption, distribution, metabolism, and excretion properties as unlabeled citric acid. Citrate is a small polar molecule that is not highly protein-bound and is freely filtered by the kidneys. It is a key intermediate of the Krebs cycle and will be metabolized by cells. Exogenously administered citrate can be a major energy source for many cells and tissues. The metabolic fate can be determined by tracking the 13C atoms.
Toxicity/Toxicokinetics
Citric acid (and its labeled form) is generally recognized as safe by the FDA for use as a food additive. However, at high therapeutic doses, it can cause significant adverse effects. Citric acid has been shown to induce oxidative damage in the liver and renal toxicity in mice. In humans, high-dose citrate can cause severe metabolic alkalosis and hypocalcemia. The labeled analog has the same safety profile. It is a chemical intermediate and potential irritant.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019 Feb;53(2):211-216.

[2]. Study on injury effect of food additive citric acid on liver tissue in mice. Cytotechnology. 2014 Mar;66(2):275-82.

[3]. Chen X, Lv Q, Liu Y, Deng W. Effects of the food additive, citric acid, on kidney cells of mice. Biotech Histochem. 2015 Jan90(1):38-44.

[4]. Citric acid induces cell-cycle arrest and apoptosis of human immortalized keratinocyte cell line (HaCaT) via caspase- and mitochondrial-dependent signaling pathways. Anticancer Res. 2013 Oct33(10):4411-20.

Additional Infomation
Citric acid-13C3 is a stable isotope-labeled biochemical primarily used as an internal standard for the quantitation of citric acid in biological samples using mass spectrometry. It is also used as a tracer for metabolic studies. Its molecular formula is C3¹3C3H₈O₇, and it has a molecular weight of 195.10 g/mol (compared to 192.12 g/mol for unlabeled citric acid). It is a high-purity (>98%) analytical chemistry reagent.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C313C3H8O7
Molecular Weight
195.10
Exact Mass
195.037
CAS #
302912-06-7
Related CAS #
Citric acid;77-92-9
PubChem CID
10313505
Appearance
Typically exists as solid at room temperature
Density
1.762g/cm3
Index of Refraction
1.575
LogP
-1.7
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
5
Heavy Atom Count
13
Complexity
227
Defined Atom Stereocenter Count
0
SMILES
C(C(=O)O)C(CC(=O)O)(C(=O)O)O
InChi Key
KRKNYBCHXYNGOX-CQDYUVAPSA-N
InChi Code
InChI=1S/C6H8O7/c7-3(8)1-6(13,5(11)12)2-4(9)10/h13H,1-2H2,(H,7,8)(H,9,10)(H,11,12)/i3+1,4+1
Chemical Name
2-hydroxypropane-1,2,3-tricarboxylic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
View More

Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
View More

Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.1256 mL 25.6279 mL 51.2558 mL
5 mM 1.0251 mL 5.1256 mL 10.2512 mL
10 mM 0.5126 mL 2.5628 mL 5.1256 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us