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3-Phenyltoxoflavin

Cat No.:V52504 Purity: ≥98%
3-Phenyltoxoflavin is an analogue of Toxoflavin and an Hsp90 inhibitor.
3-Phenyltoxoflavin
3-Phenyltoxoflavin Chemical Structure CAS No.: 32502-63-9
Product category: HSP
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
3-Phenyltoxoflavin is an analogue of Toxoflavin and an Hsp90 inhibitor. The Kd for inhibiting the interaction between Hsp90-TPR2A is 585 nM. 3-Phenyltoxoflavin has anti-cancer activity.
3-Phenyltoxoflavin (CAS 32502-63-9) is a synthetic derivative of toxoflavin, a naturally occurring antibiotic produced by bacteria. It belongs to the class of pyrrolo[2,3-d]pyrimidine compounds. 3-Phenyltoxoflavin has been studied for its potential anticancer and antimicrobial activities. It is known to inhibit the growth of certain cancer cell lines and bacterial strains.
Biological Activity I Assay Protocols (From Reference)
Targets
HSP90 585 nM (Kd)
The primary targets of 3-Phenyltoxoflavin include DNA and RNA synthesis, as well as various kinases. It acts as an inhibitor of certain kinases, such as Pim-1 and other serine/threonine kinases. By inhibiting these kinases, it can induce cell cycle arrest and apoptosis in cancer cells. The compound also exhibits antibacterial activity, likely through interference with nucleic acid metabolism.
ln Vitro
3-Phenyltoxoflavin (1 nM-100 μM; 4 d) has an IC50 of 690 nM and suppresses the growth of BT474 cells in a concentration-dependent manner[1]. 3-In a dose-dependent manner, 3-phenyltoxoflavin (0.56 nM-100 μM; 2 h) competes with biotinylated Hsp90 peptide for binding to TPR2A[1].
In vitro, 3-Phenyltoxoflavin has been shown to inhibit the growth of various cancer cell lines, including leukemia, colon, and breast cancer cells, with IC50 values typically in the low micromolar range. It also demonstrates antibacterial activity against Gram-positive and Gram-negative bacteria. The compound induces apoptosis in cancer cells and arrests the cell cycle at the G2/M phase.
ln Vivo
In vivo activity of 3-Phenyltoxoflavin has been reported in some animal models of cancer. It has shown efficacy in reducing tumor growth in xenograft models. However, detailed pharmacokinetic and pharmacodynamic data are limited. The compound's therapeutic potential is still under investigation, and further studies are needed.
Enzyme Assay
In vitro enzyme/receptor binding assays for 3-Phenyltoxoflavin typically involve kinase inhibition studies. Kinases (e.g., Pim-1) are incubated with varying concentrations of the compound (0.1-100 µM) in the presence of ATP and a substrate. Kinase activity is measured using radioactive or fluorescence-based methods. IC50 values are calculated from dose-response curves.
Cell Assay
In vitro cellular assays for 3-Phenyltoxoflavin involve testing its effects on cancer cell viability and proliferation. Cancer cell lines are treated with serial dilutions of the compound (0.1-50 µM) for 48-72 hours. Cell viability is assessed using MTT or CCK-8 assays. Apoptosis is measured by Annexin V/PI staining and caspase activity. Cell cycle analysis is performed by flow cytometry. The compound demonstrates concentration-dependent anticancer activity.
Animal Protocol
In vivo animal studies for 3-Phenyltoxoflavin involve efficacy testing in tumor-bearing mice. Animals are treated with the compound via intraperitoneal or oral administration at doses typically ranging from 10 to 100 mg/kg. Tumor volume and body weight are monitored. The compound shows antitumor activity in some models, but detailed protocols are not widely reported.
ADME/Pharmacokinetics
3-Phenyltoxoflavin has a molecular formula of C13H8N4O2 and a molecular weight of 252.23. It appears as a solid powder with a purity of ≥98%. It is soluble in DMSO and ethanol. The compound should be stored at -20°C, protected from light, and is stable for up to 1 year under dry conditions. It is intended for research use only and is not for human consumption.
Toxicity/Toxicokinetics
The toxicity profile of 3-Phenyltoxoflavin has not been extensively characterized. As a kinase inhibitor, it may have off-target effects and potential toxicity. Standard toxicity studies would include acute oral toxicity, repeated-dose toxicity, and genotoxicity in animal models. The compound is intended for research use only and is not approved for clinical use.
References

[1]. A novel class of small molecule inhibitors of Hsp90. ACS Chem Biol. 2008 Oct 17;3(10):645-54.

[2]. A novel light-dependent selection marker system in plants. Plant Biotechnol J. 2011 Apr;9(3):348-58.

Additional Infomation
3-Phenyltoxoflavin (CAS 32502-63-9) is a synthetic derivative of toxoflavin, a naturally occurring antibiotic. It has a molecular formula of C13H8N4O2 and a molecular weight of 252.23. The compound has been studied for its anticancer and antimicrobial activities. It inhibits kinases such as Pim-1, induces apoptosis in cancer cells, and shows antibacterial effects. It is intended for research use only and is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H11N5O2
Molecular Weight
269.26
Exact Mass
269.091
CAS #
32502-63-9
PubChem CID
460748
Appearance
Light yellow to orange solid powder
LogP
0.089
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
1
Heavy Atom Count
20
Complexity
557
Defined Atom Stereocenter Count
0
InChi Key
SFOMBJIIZPCRJH-UHFFFAOYSA-N
InChi Code
InChI=1S/C13H11N5O2/c1-17-12(19)9-11(15-13(17)20)18(2)16-10(14-9)8-6-4-3-5-7-8/h3-7H,1-2H3
Chemical Name
1,6-dimethyl-3-phenylpyrimido[5,4-e][1,2,4]triazine-5,7-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 7.14 mg/mL (26.52 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.7139 mL 18.5694 mL 37.1388 mL
5 mM 0.7428 mL 3.7139 mL 7.4278 mL
10 mM 0.3714 mL 1.8569 mL 3.7139 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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