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Violacein

Cat No.:V10956 Purity: ≥98%
Violacein is a secondary metabolite (SM, chemical compound) of microorganisms with strong anti-cancer effect and low side effects.
Violacein
Violacein Chemical Structure CAS No.: 548-54-9
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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1mg
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Product Description
Violacein is a secondary metabolite (SM, chemical compound) of microorganisms with strong anti-cancer effect and low side effects. Violacein has anti-oxidant effect. Apoptosis inducers.
Violacein is a bacterial secondary metabolite originally isolated from Chromobacterium violaceum, producing a characteristic purple pigment. It has the molecular formula C20H13N3O3 and molecular weight of 343.34. Violacein possesses potent anticancer activity with low side effects, along with antibacterial, antiprotozoal, and antioxidant properties. The compound acts as an apoptosis inducer and has been shown to decrease receptor tyrosine kinase expression and disturb signaling pathways in colorectal cancer cells. Violacein demonstrates anticancer activity in both 2D and 3D cell culture models. It is produced by C. violaceum in response to N-hexanoyl homoserine lactone quorum sensing signals. Violacein targets the cell membrane of bacterial cells but does not affect the cell wall.
Biological Activity I Assay Protocols (From Reference)
Targets
Violacein targets apoptosis pathways and receptor tyrosine kinase signaling in cancer cells. It functions as an apoptosis inducer by activating caspase-dependent and caspase-independent cell death pathways. Violacein decreases the expression of receptor tyrosine kinases and disturbs signaling pathways in cancer cells, including MAPK and PI3K/AKT pathways. In bacteria, violacein targets the cell membrane, disrupting membrane integrity and leading to cell death without affecting the cell wall. The compound also exhibits antioxidant activity by scavenging free radicals. Its multi-target mechanism contributes to its broad biological activities.
ln Vitro
In both 2D and 3D cell models, vitexin (0.25–3 µM; 24 hours; HCT116 and HT29 cells) exhibits anticancer action [1]. In CRC cells, vitexin inhibits RTK expression and messes with signaling pathways [1].
Violacein demonstrates potent in vitro anticancer activity against various cancer cell lines including HCT116 and HT29 colorectal cancer cells. The compound shows activity in both 2D monolayer and 3D spheroid culture models, indicating good tissue penetration. Violacein decreases RTK expression and disrupts cancer cell signaling pathways. The compound induces apoptosis through both intrinsic and extrinsic pathways. Violacein also exhibits antibacterial activity against Gram-positive and Gram-negative bacteria, and antiprotozoal activity against parasites. Its antioxidant properties protect cells from oxidative stress. Violacein shows low toxicity to normal cells at anticancer concentrations.
ln Vivo
Violacein demonstrates in vivo anticancer activity with low side effects in animal models. The compound shows efficacy in xenograft models of colorectal cancer, reducing tumor growth and promoting apoptosis. Violacein's low systemic toxicity makes it an attractive candidate for cancer therapy. The compound also shows antibacterial activity in in vivo infection models. Its antioxidant properties may contribute to its protective effects in various disease models. Violacein has been studied for its chemopreventive potential. The compound's in vivo activity is dose-dependent and shows good correlation with in vitro potency. Pharmacokinetic studies indicate favorable tissue distribution.
Enzyme Assay
The in vitro enzyme/receptor binding assay for violacein involves testing its activity against various targets. For apoptosis studies, caspase activity assays use fluorogenic substrates to measure caspase-3, -8, and -9 activation in cell lysates treated with violacein. RTK activity is measured using kinase assays with purified receptors or immunoprecipitated proteins. Antioxidant activity is assessed using DPPH radical scavenging, ABTS, or FRAP assays. For antibacterial studies, enzyme assays such as beta-lactamase or penicillin-binding protein assays may be performed. Binding affinity to specific targets may be measured using surface plasmon resonance or isothermal titration calorimetry.
Cell Assay
Cell viability assay [1].
Cell Types: HCT116 and HT29 (1.8 × 104 cells/well - 100 µL) cells.
Tested Concentrations: 0.25, 0.5, 1.0, 1.5, 2.0, 2.5 and 3.0 µM.
Incubation Duration: 24 hrs (hours).
Experimental Results: In 2D culture models, shikonin treatment diminished cell viability as formazan production was diminished in HT29 and HCT116 cell lines. Furthermore, HT29 is more sensitive to violacein as evidenced by the IC50 value (0.6 μM) compared to HCT116 (1.2 μM).
The in vitro cellular assay for violacein uses cancer cell lines such as HCT116, HT29, HeLa, or MCF-7 cells. Cells are cultured in appropriate medium and treated with varying concentrations of violacein (typically 0.1-50 μM) for 24-72 hours. Cell viability is assessed using MTT, SRB, or CellTiter-Glo assays. Apoptosis is evaluated by annexin V-FITC/propidium iodide staining, TUNEL assay, or caspase activity measurements. Cell cycle analysis is performed by flow cytometry with propidium iodide staining. RTK and signaling pathway proteins are analyzed by Western blotting. ROS production is measured using DCFH-DA or other fluorescent probes. Antibacterial activity is assessed by broth microdilution.
Animal Protocol
The in vivo animal experiment for violacein uses immunodeficient mice bearing human cancer xenografts. Tumors are established by subcutaneous injection of cancer cells. When tumors reach appropriate size, mice are randomized and treated with violacein via intraperitoneal, intravenous, or oral administration at doses ranging from 5-50 mg/kg. Treatment schedules may be daily or every other day for 2-4 weeks. Tumor volumes are measured using calipers. Body weight and toxicity signs are monitored. At study endpoint, tumors are excised for histopathological analysis, immunohistochemistry for proliferation and apoptosis markers, and Western blotting for signaling pathway proteins. Blood samples are collected for pharmacokinetic and hematological analysis.
References

[1]. Violacein negatively modulates the colorectal cancer survival and epithelial-mesenchymal transition. J Cell Biochem. 2022 Jul;123(7):1247-1258.

[2]. Antioxidant properties of violacein: possible relation on its biological function. Bioorg Med Chem. 2006 Dec 15;14(24):8307-13.

Additional Infomation
Violacein belongs to the hydroxyindole class of compounds. It is formed by an oxidative coupling reaction between the 3-position of 1,3-dihydro-2H-indole-2-one and the 3-position of 1,3-dihydro-2H-pyrrole-2-one, with the 5-position replaced by a 5-hydroxy-1H-indole-3-yl group. The newly formed double bond has an E-configuration. It is a purple pigment with antibacterial, antifungal, antiprotozoal, and anticancer activities. Violacein can function as a bacterial metabolite, antitumor agent, apoptosis inducer, antibacterial agent, and antifungal agent. It belongs to the hydroxyindole, pyrrole, oxoindole, and olefin compounds. Functionally, it is related to protoViolacein.
Violacein has been reported to exist in Chromobacterium violaceum, and relevant data are available for reference.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H13N3O3
Molecular Weight
343.33552
Exact Mass
343.096
CAS #
548-54-9
PubChem CID
11053
Appearance
Brown to black solid powder
Density
1.549g/cm3
Boiling Point
821.4ºC at 760mmHg
Flash Point
450.6ºC
Index of Refraction
1.804
Source
Originated from microorganisms: Chromobacterium violaceum
LogP
3.111
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
2
Heavy Atom Count
26
Complexity
753
Defined Atom Stereocenter Count
0
SMILES
O=C1/C(C2=CC=CC=C2N1)=C3C=C(C(C4=C5)=CNC4=CC=C5O)NC\3=O
InChi Key
SHLJIZCPRXXHHZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C20H13N3O3/c24-10-5-6-15-12(7-10)14(9-21-15)17-8-13(19(25)23-17)18-11-3-1-2-4-16(11)22-20(18)26/h1-9,21,23-25H
Chemical Name
3-[2-hydroxy-5-(5-hydroxy-1H-indol-3-yl)-1H-pyrrol-3-yl]indol-2-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~10 mg/mL (~29.1 mM; with ultrasonication)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution → 50 μL Tween 80 → 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO → 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO → 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin → 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO → 100 μLPEG300 → 200 μL castor oil → 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol → 100 μL Cremophor → 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH → 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300:Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9126 mL 14.5628 mL 29.1256 mL
5 mM 0.5825 mL 2.9126 mL 5.8251 mL
10 mM 0.2913 mL 1.4563 mL 2.9126 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration: mg/mL;

Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT05856214 Recruiting Behavioral: Couple-Based Violence Prevention education(CBVPE) Intimate Partner Violence Jimma University 2023-08-01 Not Applicable
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