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vc-PABC-DM1

Cat No.:V54507 Purity: ≥98%
vc-PABC-DM1 is used to synthesize disulfide linker-based ADC molecules.
vc-PABC-DM1
vc-PABC-DM1 Chemical Structure CAS No.: 1416792-90-9
Product category: ADC Linker
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes
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Product Description
vc-PABC-DM1 is used to synthesize disulfide linker-based ADC molecules. vc-PABC-DM1 may be utilized to explore serum stability.
vc-PABC-DM1 is a chemical compound utilized for the synthesis of antibody-drug conjugates (ADCs) that incorporate a disulfide linker. It is instrumental in investigating serum stability and is used in ADC research to explore the pharmacokinetics and efficacy of disulfide-linked conjugates. The DM1 payload is a potent microtubule inhibitor.
Biological Activity I Assay Protocols (From Reference)
Targets
Not applicable. vc-PABC-DM1 is a drug-linker conjugate for ADC synthesis, not a drug. The vc (valine-citrulline) peptide is a cleavable dipeptide linker that is stable in circulation but is cleaved by cathepsin B inside lysosomes of target cells. The PABC (p-aminobenzylcarbamate) spacer facilitates efficient release of the DM1 payload. DM1 (maytansinoid) is a potent microtubule-targeting agent that inhibits tubulin polymerization. vc-PABC-DM1 can be used to explore serum stability of disulfide linker-based ADC molecules.
ln Vitro
As a research intermediate for ADC synthesis, vc-PABC-DM1 has no direct biological activity. Its value lies in enabling the synthesis of stable and functional ADCs. The resulting ADCs exhibit potent cytotoxicity against target antigen-positive cancer cells with IC50 values in the picomolar to nanomolar range. The linker's stability in serum is a key parameter studied using this compound.
ln Vivo
No specific in vivo data is reported for vc-PABC-DM1 alone. As a drug-linker conjugate, it is conjugated to an antibody to form an ADC. ADCs synthesized with vc-PABC-DM1 have been shown to have excellent serum stability and potent in vivo efficacy in tumor xenograft models. The cleavable valine-citrulline dipeptide is specifically cleaved by lysosomal cathepsin B, ensuring targeted payload release.
Enzyme Assay
vc-PABC-DM1 is used to synthesize disulfide linker-based ADC molecules. For cell-free stability studies, vc-PABC-DM1 is incubated with human or mouse serum (50% serum in PBS) at 37degC for up to 72-120 hours. At defined time points, samples are taken, and the intact drug-linker conjugate is extracted and analyzed by LC-MS. The half-life of the conjugate in serum is calculated from the disappearance curve. To assess cathepsin B cleavage, purified cathepsin B is incubated with vc-PABC-DM1 (1-10 uM) in acetate buffer (pH 5.0) at 37degC for 0-24 hours, and DM1 release is quantified by LC-MS.
Cell Assay
Not applicable. vc-PABC-DM1 is not used directly in cell-based assays. The complete ADC is used for cell culture studies. Target-positive cancer cells (e.g., HER2-positive SK-BR-3 cells) are seeded in 96-well plates (5,000 cells/well) and treated with serial dilutions of the ADC (0.001-100 nM) for 72-96 hours. Cell viability is measured using the CellTiter-Glo assay. Cytotoxicity is compared between target-positive and target-negative cell lines to calculate the selectivity index. In a bystander killing assay, a mixture of target-positive and target-negative cells is treated with the ADC, and target-negative cell death is quantified by flow cytometry.
Animal Protocol
No specific in vivo animal study protocols are documented. For an ADC synthesized with vc-PABC-DM1, a typical protocol involves establishing subcutaneous xenografts of target-positive cancer cells in 6-8 week old female NSG mice. When tumors reach 100-200 mm3, the ADC (e.g., trastuzumab-vc-PABC-DM1) is administered intravenously at a single dose of 1-5 mg/kg (or multiple doses). Tumor volume is measured twice weekly. At study termination, tumors are excised for IHC (Ki67, cleaved caspase-3). Blood is collected for PK analysis (total ADC, intact ADC, and DM1 release).
ADME/Pharmacokinetics
Not applicable for the drug-linker conjugate. The vc-PABC-DM1 conjugate has a molecular weight of 1099.73 g/mol. When conjugated to an antibody, the ADC exhibits PK properties similar to the parent antibody (half-life of several days in mice). The vc linker is stable in circulation (half-life >7 days) but is efficiently cleaved in lysosomes. The DM1 payload is released intracellularly and exhibits a short tissue half-life.
Toxicity/Toxicokinetics
No toxicity data is reported for vc-PABC-DM1. DM1 is a potent microtubule inhibitor with significant cytotoxicity. When conjugated to an antibody, the ADC must be handled as a highly potent cytotoxic compound. Standard ADC safety guidelines should be followed. The compound is for research use only, not for human therapeutic use.
References
[1]. Widdison WC. Novel maytansinoid derivatives with peptide linker and conjugates thereof. WO2012177837A2.
Additional Infomation
vc-PABC-DM1 has the molecular formula C53H75ClN8O13S and a molecular weight of 1099.73. The vc (valine-citrulline) dipeptide is a cathepsin-cleavable linker widely used in FDA-approved ADCs such as brentuximab vedotin (Adcetris®) and polatuzumab vedotin. DM1 is a maytansinoid microtubule inhibitor that binds to tubulin and inhibits polymerization. The compound is stored as a powder at -20degC. It is for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C53H75CLN8O13S
CAS #
1416792-90-9
Appearance
White to off-white solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~90.93 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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