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UMK57

Alias: UMK57, UMK-57, UMK 57
Cat No.:V27841 Purity: ≥98%
UMK57 is a novel inhibitor of chromosomal instability, potentiating MCAK in vivo and transiently suppressing chromosome mis-segregation in CIN cancer cells.
UMK57
UMK57 Chemical Structure CAS No.: 342595-74-8
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
UMK57 is a novel inhibitor of chromosomal instability, potentiating MCAK in vivo and transiently suppressing chromosome mis-segregation in CIN cancer cells.
UMK57 is a novel small-molecule inhibitor of chromosomal instability (CIN) that specifically promotes kinetochore-microtubule (k-MT) attachment error correction during mitosis. It functions as a microtubule destabilizer that enhances the correction of erroneous k-MT attachments, thereby increasing the fidelity of chromosome segregation. By promoting the correction of k-MT attachment errors, UMK57 reduces the occurrence of lagging chromosomes and chromosome mis-segregation in CIN cancer cells. The compound acts as an activator of MCAK (mitotic centromere-associated kinesin), a kinesin-13 family member that plays a critical role in regulating microtubule dynamics and k-MT attachment stability at the kinetochore. UMK57 has been shown to transiently suppress chromosome mis-segregation in CIN cancer cells and inhibit cancer cell proliferation. Its mechanism involves reversible Aurora B signaling pathway modulation. UMK57 is a valuable tool for studying mitotic regulation, aneuploidy, and potential cancer treatments involving microtubule dynamics.
Biological Activity I Assay Protocols (From Reference)
Targets
UMK57 targets the kinetochore-microtubule (k-MT) attachment machinery during mitosis, specifically by activating MCAK (mitotic centromere-associated kinesin), a microtubule depolymerase that is a member of the kinesin-13 family. MCAK plays a critical role in correcting erroneous k-MT attachments by destabilizing microtubule ends at the kinetochore. By potentiating MCAK activity, UMK57 enhances the correction of k-MT attachment errors, thereby increasing chromosome segregation fidelity. The compound also destabilizes kinetochore-microtubule attachments during mitosis, reducing the occurrence of lagging chromosomes and chromosome mis-segregation in CIN cancer cells. Its mechanism involves reversible modulation of the Aurora B signaling pathway.
ln Vitro
In vitro, UMK57 is a small-molecule compound that specifically promotes k-MT attachment error correction and inhibits chromosome mis-segregation. It acts as an activator of MCAK and a destabilizer of kinetochore-microtubule attachments. UMK57 enhances MCAK-dependent microtubule depolymerization, increases kinetochore-microtubule turnover efficiency, and reduces chromosome mis-segregation and lagging chromosomes. The compound inhibits cancer cell proliferation. Its effects on mitotic progression and chromosome segregation have been characterized in cell-based assays using CIN cancer cell lines.
ln Vivo
In vivo, UMK57 potentiates MCAK activity and transiently suppresses chromosome mis-segregation in CIN cancer cells. The compound has been shown to inhibit cancer cell proliferation. By promoting faithful chromosome segregation, UMK57 has the potential to reduce aneuploidy and genomic instability in cancer cells. However, detailed in vivo efficacy data from animal models are limited. Further studies are needed to fully characterize its therapeutic potential.
Enzyme Assay
In vitro enzyme/receptor binding (non-cell) assays for UMK57 involve studying its effects on microtubule dynamics and MCAK activity. Microtubule polymerization assays are performed using purified tubulin and varying concentrations of UMK57 to assess its effects on microtubule assembly and disassembly. MCAK activity is measured using microtubule depolymerization assays, where the rate of microtubule depolymerization by MCAK is monitored in the presence of UMK57. The compound's ability to destabilize microtubules and enhance MCAK activity is quantified.
Cell Assay
In vitro cell-based experiments for UMK57 are conducted using CIN cancer cell lines. Cells are treated with UMK57 at varying concentrations, and mitotic progression is assessed by immunofluorescence staining of kinetochore and microtubule markers (e.g., CREST, α-tubulin, Aurora B). The frequency of chromosome mis-segregation and lagging chromosomes is quantified by live-cell imaging or by scoring mitotic cells. Cell proliferation is assessed using standard viability assays. The compound's effects on Aurora B signaling are evaluated by Western blot analysis of Aurora B substrates.
Animal Protocol
In vivo animal experiments for UMK57 are performed in xenograft mouse models of cancer. UMK57 is administered, and tumor growth, mitotic index, and chromosome segregation fidelity are assessed. However, detailed in vivo efficacy data are limited. Further studies are needed to evaluate the compound's therapeutic potential in animal models of CIN cancers.
ADME/Pharmacokinetics
UMK57 is a small molecule (MW 295.4, formula C17H17N3S) with suitable physicochemical properties for research use. Detailed pharmacokinetic parameters are limited in available literature. The compound is soluble in DMSO. Its stability in solution has rarely been reported.
Toxicity/Toxicokinetics
Preclinical toxicology data for UMK57 are limited. The compound is supplied for laboratory research use only. As a compound that modulates mitotic progression and microtubule dynamics, potential effects on normal cell division should be considered.
References

[1]. Adaptive Resistance to an Inhibitor of Chromosomal Instability in Human Cancer Cells. Cell Rep. 2016 Nov 8;17(7):1755-1763.

Additional Infomation
UMK57 is a research compound used primarily for studying mitotic regulation, chromosomal instability, aneuploidy, and potential cancer treatments involving microtubule dynamics. Its ability to promote k-MT attachment error correction and inhibit chromosome mis-segregation makes it a valuable tool for exploring the mechanisms of chromosomal instability in cancer and for identifying new therapeutic strategies targeting mitotic fidelity. The compound is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C17H17N3S
Molecular Weight
295.401982069016
Exact Mass
295.114
Elemental Analysis
C, 69.12; H, 5.80; N, 14.22; S, 10.85
CAS #
342595-74-8
PubChem CID
693939
Appearance
Off-white to light yellow solid powder
Density
1.3±0.1 g/cm3
Boiling Point
492.5±45.0 °C at 760 mmHg
Flash Point
251.7±28.7 °C
Vapour Pressure
0.0±1.2 mmHg at 25°C
Index of Refraction
1.673
LogP
4.12
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
2
Heavy Atom Count
21
Complexity
350
Defined Atom Stereocenter Count
0
SMILES
S1C=C(C2C=CC(C)=CC=2)C2C1=NC=NC=2N1CCCC1
InChi Key
VOAWQTDHSSKEKA-UHFFFAOYSA-N
InChi Code
InChI=1S/C17H17N3S/c1-12-4-6-13(7-5-12)14-10-21-17-15(14)16(18-11-19-17)20-8-2-3-9-20/h4-7,10-11H,2-3,8-9H2,1H3
Chemical Name
5-(4-methylphenyl)-4-pyrrolidin-1-ylthieno[2,3-d]pyrimidine
Synonyms
UMK57, UMK-57, UMK 57
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~2 mg/mL (~6.77 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.3852 mL 16.9262 mL 33.8524 mL
5 mM 0.6770 mL 3.3852 mL 6.7705 mL
10 mM 0.3385 mL 1.6926 mL 3.3852 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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