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Tubulysin

Cat No.:V32015 Purity: ≥98%
The Tubulysin family of secondary metabolite (SM, chemical compound)s was originally extracted from the myxobacteria Archangium geophyra and Angiococcus disciformis.
Tubulysin
Tubulysin Chemical Structure CAS No.: 1943604-24-7
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
100mg
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Product Description
The Tubulysin family of secondary metabolite (SM, chemical compound)s was originally extracted from the myxobacteria Archangium geophyra and Angiococcus disciformis. These compounds are potent microtubule destabilizers and anti-microtubule toxins with effective IC50 concentrations in the picomolar range against multidrug-resistant cancer/tumor cell lines. Tubulysins are ideal candidates for conjugation into small active molecule conjugates (SMDC) delivery systems and are often used in ADC synthesis as ADC cytotoxins.
Tubulysin (CAS#: 1943604-24-7) is a family of potent cytotoxic peptides originally isolated from the myxobacteria Archangium geophyra and Angiococcus disciformis. With the molecular formula C44H67N5O9S and a molecular weight of 842.10, Tubulysin is known for its strong antimitotic activity. These compounds are potent microtubule destabilizers with effective IC50 concentrations in the picomolar range against multidrug-resistant cancer cell lines. Tubulysin's unique structure and activity make it a valuable tool in oncology drug development.
Biological Activity I Assay Protocols (From Reference)
Targets
Tubulysin targets tubulin, the protein subunit of microtubules that form the cytoskeleton and mitotic spindle. By binding to tubulin, Tubulysin disrupts microtubule polymerization and dynamics, ultimately leading to cell cycle arrest and apoptosis in rapidly dividing cells. As a potent microtubule destabilizer, Tubulysin is an anti-microtubule toxin that exhibits effective IC50 concentrations in the picomolar range against multidrug-resistant cancer cell lines. This mechanism of action is similar to that of other tubulin-targeting agents such as the auristatins and maytansinoids.
ln Vitro
In vitro, Tubulysin demonstrates potent cytotoxic activity against a wide range of cancer cell lines, with effective IC50 concentrations in the picomolar range. The compound exhibits activity against multidrug-resistant cancer cell lines, making it a valuable tool for studying mechanisms of drug resistance and developing strategies to overcome it. Tubulysin's potent antimitotic activity is attributed to its ability to bind to tubulin and disrupt microtubule polymerization and dynamics, leading to cell cycle arrest and apoptosis in rapidly dividing cells.
ln Vivo
In vivo, Tubulysin has attracted significant interest as a payload in antibody-drug conjugates (ADCs) for targeted cancer therapy. The compound's extreme potency and ability to kill cancer cells at picomolar concentrations make it an ideal candidate for incorporation into small active molecule conjugate (SMDC) delivery systems and ADC synthesis. Due to its severe toxicity as a free drug, Tubulysin's therapeutic utility is realized through targeted delivery via ADCs or SMDCs.
Enzyme Assay
Receptor binding or enzyme activity assays for Tubulysin are performed using purified tubulin protein. The binding of Tubulysin to tubulin is assessed using methods such as fluorescence polarization, surface plasmon resonance (SPR), or competition binding assays with labeled tubulin-binding agents. Alternatively, the effect of Tubulysin on tubulin polymerization is measured spectrophotometrically by monitoring the turbidity of microtubule formation. Tubulysin is incubated with tubulin at varying concentrations in polymerization buffer, and the extent of polymerization is measured at 340 nm. IC50 values for inhibition of polymerization are calculated from concentration-response curves.
Cell Assay
Cellular assays for Tubulysin are performed using cancer cell lines, including multidrug-resistant lines. Cells are cultured in appropriate media and treated with Tubulysin at varying concentrations for defined time periods. Cell viability and proliferation are assessed using standard assays such as MTT, CellTiter-Glo, or colony formation assays. Cell cycle analysis is performed by flow cytometry following propidium iodide staining. Apoptosis is assessed by measuring caspase activation, PARP cleavage, or Annexin V staining. The picomolar IC50 values demonstrate the extreme potency of Tubulysin against cancer cells.
Animal Protocol
In vivo studies with Tubulysin are typically conducted using Tubulysin-based ADCs or SMDCs in mouse xenograft models of cancer. The ADC or SMDC is administered via intravenous injection at defined doses and schedules. Tumor growth is monitored by caliper measurements, and tumor volumes are calculated. The targeted delivery system allows for the selective delivery of Tubulysin to tumor cells, minimizing systemic toxicity. Pharmacokinetic parameters are determined from plasma samples collected at various time points. Tubulysin's severe toxicity as a free drug necessitates targeted delivery approaches.
ADME/Pharmacokinetics
Tubulysin has a molecular weight of 842.10 and a molecular formula of C44H67N5O9S. The compound is a potent microtubule destabilizer with activity in the picomolar range. As a free drug, Tubulysin has limited therapeutic utility due to severe toxicity. The compound is therefore ideal for incorporation into small active molecule conjugate (SMDC) delivery systems and is commonly used in ADC synthesis as a cytotoxic payload. Detailed pharmacokinetic data for Tubulysin as a free drug are limited.
Toxicity/Toxicokinetics
Comprehensive toxicology data for Tubulysin as a free drug are limited due to its severe toxicity. The compound is intended for research use only and is not approved for human therapeutic applications as a free drug. Tubulysin's extreme potency requires careful handling and appropriate safety precautions. The compound is used as a payload in ADCs and SMDCs for targeted cancer therapy research. Standard laboratory safety practices should be followed when handling this compound, including the use of appropriate personal protective equipment.
References

[1]. Prostate-Specific Membrane Antigen-Specific Antitumor Activity of a Self-Immolative Tubulysin Conjugate. Bioconjug Chem. 2019 Jun 19;30(6):1805-1813.

Additional Infomation
Tubulysin is a family of potent cytotoxic peptides originally isolated from myxobacteria. These compounds are potent microtubule destabilizers with effective IC50 concentrations in the picomolar range against multidrug-resistant cancer cell lines. Due to their high potency, Tubulysins have attracted significant interest as payloads in antibody-drug conjugates (ADCs) for targeted cancer therapy. Tubulysin is also an ideal candidate for incorporation into small active molecule conjugate (SMDC) delivery systems. The compound is for research purposes only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Exact Mass
841.465
CAS #
1943604-24-7
PubChem CID
52945681
Appearance
White to off-white solid powder
LogP
5.4
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
12
Rotatable Bond Count
24
Heavy Atom Count
59
Complexity
1390
Defined Atom Stereocenter Count
7
SMILES
CC[C@H](C)[C@@H](C(=O)N(COC(=O)CC(C)C)[C@H](C[C@H](C1=NC(=CS1)C(=O)N[C@@H](CC2=CC=C(C=C2)C)C[C@H](C)C(=O)O)OC(=O)C)C(C)C)NC(=O)[C@H]3CCCCN3C
InChi Key
DLKUYSQUHXBYPB-NSSHGSRYSA-N
InChi Code
InChI=1S/C44H67N5O9S/c1-11-29(7)39(47-41(53)35-14-12-13-19-48(35)10)43(54)49(25-57-38(51)20-26(2)3)36(27(4)5)23-37(58-31(9)50)42-46-34(24-59-42)40(52)45-33(21-30(8)44(55)56)22-32-17-15-28(6)16-18-32/h15-18,24,26-27,29-30,33,35-37,39H,11-14,19-23,25H2,1-10H3,(H,45,52)(H,47,53)(H,55,56)/t29-,30-,33+,35+,36+,37+,39-/m0/s1
Chemical Name
(2S,4R)-4-[[2-[(1R,3R)-1-acetyloxy-4-methyl-3-[3-methylbutanoyloxymethyl-[(2S,3S)-3-methyl-2-[[(2R)-1-methylpiperidine-2-carbonyl]amino]pentanoyl]amino]pentyl]-1,3-thiazole-4-carbonyl]amino]-2-methyl-5-(4-methylphenyl)pentanoic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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