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TIBI

Cat No.:V9397 Purity: ≥98%
TIBI is a potent ATP-competitive Rio1 inhibitor (IC50= 0.09 μM, Ki= 0.05 μM).
TIBI
TIBI Chemical Structure CAS No.: 1196457-06-3
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
50mg
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Product Description
TIBI is a potent ATP-competitive Rio1 inhibitor (IC50= 0.09 μM, Ki= 0.05 μM). TIBI enhances the thermal stability of Rio1 enzyme.
TIBI (CAS: 1196457-06-3) is a potent and ATP-competitive inhibitor of the atypical kinase Rio1. It is a tetraiodinated benzimidazole derivative. TIBI inhibits Rio1 with an IC50 of 0.09 μM and a Ki of 0.05 μM. The compound enhances the thermal stability of the Rio1 enzyme, indicating direct binding. TIBI acts in a manner similar to fungamycin. It is used as a research tool to study the function of Rio1 kinase in ribosome biogenesis and cell growth.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of TIBI is Rio1, an atypical protein kinase that is involved in ribosome biogenesis and cell cycle progression. TIBI acts as an ATP-competitive inhibitor, meaning it competes with ATP for binding to the kinase active site. It inhibits Rio1 with an IC50 of 0.09 μM and a Ki of 0.05 μM. TIBI enhances the thermal stability of the Rio1 enzyme, confirming its direct binding to the target.
ln Vitro
In vitro, TIBI demonstrates potent inhibition of Rio1 kinase activity. The compound inhibits Rio1 with an IC50 of 0.09 μM and a Ki of 0.05 μM. TIBI enhances the thermal stability of the Rio1 enzyme, indicating that it stabilizes the protein upon binding. The compound's ATP-competitive mechanism of action is similar to that of fungamycin. However, detailed cellular activity data are not extensively reported in the available literature.
ln Vivo
In vivo data for TIBI are not extensively reported in the available literature. As a potent Rio1 inhibitor, the compound has potential for in vivo applications in studying the role of Rio1 in cell growth and ribosome biogenesis. However, specific in vivo efficacy data, including animal models, dosing regimens, and pharmacokinetic-pharmacodynamic relationships, are not detailed in the available sources. The compound is classified as a research-use-only chemical.
Enzyme Assay
In vitro enzyme assays for TIBI typically involve measuring its inhibition of Rio1 kinase activity. Recombinant Rio1 enzyme is incubated with a peptide substrate and ATP in the presence of varying concentrations of TIBI. The incorporation of phosphate into the substrate is measured, and the IC50 for inhibition is calculated. TIBI shows an IC50 of 0.09 μM. The Ki of 0.05 μM is determined from enzyme kinetics at different ATP concentrations. The compound's ability to enhance Rio1 thermal stability is assessed by thermal shift assays.
Cell Assay
Cellular assays for TIBI are performed in cells to assess its effects on Rio1 function and downstream cellular processes. Cells are treated with TIBI, and the phosphorylation of Rio1 substrates is measured. The compound's effects on cell growth, proliferation, and ribosome biogenesis are also assessed. However, specific cellular assay protocols are not detailed in the available literature.
Animal Protocol
In vivo animal studies with TIBI are not extensively documented in the available literature. Based on its inhibition of Rio1, potential in vivo models could include cancer models or models of ribosomopathies. However, specific protocols are not detailed in the available sources. The compound is intended for laboratory research use only.
ADME/Pharmacokinetics
TIBI has a molecular weight of 621.72 and a molecular formula of C7H2I4N2. It is typically dissolved in DMSO for in vitro studies. The compound is stable when stored as a powder at -20°C and in solution at -80°C for up to 1 year. However, detailed pharmacokinetic parameters are not available in the literature for this research compound.
Toxicity/Toxicokinetics
Comprehensive toxicology data for TIBI are not extensively reported. The compound is classified as a research-use-only chemical and is not intended for human consumption. As a tetraiodinated compound, it may have potential for iodine-related toxicity. Specific toxicological data, including acute toxicity, genotoxicity, and target organ effects, are not reported in the available literature.
Additional Infomation
Structure in the first source
TIBI is a research-grade compound not approved for clinical use. Its primary application is as a pharmacological tool for studying Rio1 kinase. The compound is used to investigate the role of Rio1 in ribosome biogenesis, cell growth, and cell cycle progression. Its potent and ATP-competitive inhibition of Rio1 makes it a valuable tool for studying the structure and function of this atypical kinase.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Exact Mass
621.639
CAS #
1196457-06-3
PubChem CID
44263430
Appearance
White to off-white solid powder
LogP
4.1
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
1
Rotatable Bond Count
0
Heavy Atom Count
13
Complexity
203
Defined Atom Stereocenter Count
0
SMILES
C1=NC2=C(N1)C(=C(C(=C2I)I)I)I
InChi Key
ZUHFPYANLLWSJR-UHFFFAOYSA-N
InChi Code
InChI=1S/C7H2I4N2/c8-2-3(9)5(11)7-6(4(2)10)12-1-13-7/h1H,(H,12,13)
Chemical Name
4,5,6,7-tetraiodo-1H-benzimidazole
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~50 mg/mL (~80.42 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT00507806 TERMINATED Drug: perflutren lipid microsphere Acute Ischemic Stroke ImaRx Therapeutics 2005-03 Phase 1
Phase 2
NCT01100918 COMPLETED Device: BiV ICD
Device: ICD
Heart Failure Barts & The London NHS Trust 2007-02 Phase 4
NCT05195983 NOT YET RECRUITING Acute Stroke Assiut University 2022-01-10
NCT03764852 RECRUITING Procedure: outpatient laparoscopic
Procedure: outpatient laparoscopic
Pelvic Organ Prolapse Centre Hospitalier Universitaire de Nice 2019-12-14 Not Applicable
NCT03290053 TERMINATED Drug: SonoVue
Drug: Sodium chloride
Procedure: Transcranial Ultrasound
Procedure: Sham Transcranial Ultrasound
Ischemic Stroke Umeå University 2017-11-28 Phase 3
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