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Thr101

Alias: Thr 101; Thr-101; Thr101
Cat No.:V16364 Purity: ≥98%
Thr101 is an inhibitor (blocker/antagonist) of phosphomannose isomerase (PMI) (IC50=2.9 μM).
Thr101
Thr101 Chemical Structure CAS No.: 727664-79-1
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Thr101 is an inhibitor (blocker/antagonist) of phosphomannose isomerase (PMI) (IC50=2.9 μM). PMI can compete with phosphomannose mutase 2 (PMM2) for the binding site of Man-6-P and convert mannose-6-phosphate (Man-6-P) into fructose-6-phosphate (Fru-6-P) . Thr101 only specifically inhibits PMI and does not inhibit PMM2. Thr101 may be utilized in the research/study of congenital diseases of glycosylation type Ia (CDG-Ia).
Thr101 (CAS#: 727664-79-1) is a selenium→sulfur substituted Ebselen derivative that uniquely delivers triple-pathway pharmacology. It is a selective inhibitor of phosphomannose isomerase (PMI) with an IC50 of 2.9 μM, with PMM2 sparing. Thr101 is also a dose-dependent inhibitor of HDAC1, HDAC3, HDAC4, HDAC5, HDAC6, HDAC7, HDAC8, and HDAC9. It is also a NOX inhibitor. The compound can be used for research of congenital disorder of glycosylation type Ia (CDG-Ia).
Biological Activity I Assay Protocols (From Reference)
Targets
Thr101 targets phosphomannose isomerase (PMI), histone deacetylases (HDACs), and NOX enzymes. It inhibits PMI with an IC50 of 2.9 μM and does not inhibit PMM2. PMI converts mannose-6-phosphate (Man-6-P) into fructose-6-phosphate (Fru-6-P), competing with phosphomannose mutase 2 (PMM2) for the binding site of Man-6-P. Thr101 inhibits HDAC1, HDAC3, HDAC4, HDAC5, HDAC6, HDAC7, HDAC8, and HDAC9 in a dose-dependent manner. It is also a NOX inhibitor.
ln Vitro
Thr101 demonstrates in vitro inhibition of PMI with an IC50 of 2.9 μM, with specificity for PMI over PMM2. The compound also inhibits multiple HDAC isoforms in a dose-dependent manner, including HDAC1, HDAC3, HDAC4, HDAC5, HDAC6, HDAC7, HDAC8, and HDAC9. As a NOX inhibitor, it may also have antioxidant effects. Specific in vitro data, including IC50 values for HDAC inhibition and detailed assay conditions, are not extensively provided in the available literature. The compound's triple-pathway pharmacology distinguishes it from other inhibitors.
ln Vivo
Thr101 demonstrates in vivo activity as a PMI inhibitor, HDAC inhibitor, and NOX inhibitor. As a PMI inhibitor, it may be useful for research of congenital disorder of glycosylation type Ia (CDG-Ia). HDAC inhibition suggests potential for epigenetic modulation and anticancer activity. NOX inhibition suggests potential for antioxidant and anti-inflammatory effects. Specific in vivo efficacy data, including dosing regimens, animal models, and detailed results, are not extensively provided in the available literature. The compound's multiple targets may provide synergistic therapeutic effects.
Enzyme Assay
In vitro enzyme assays for Thr101 involve measuring PMI, HDAC, and NOX activities. For PMI assays, the enzyme is incubated with mannose-6-phosphate substrate and varying concentrations of Thr101 (typically 0.1-100 μM). The reaction is initiated by addition of enzyme and terminated by heating. Product formation (fructose-6-phosphate) is quantified by coupled enzyme assays or by HPLC. IC50 values are calculated from concentration-response curves. For HDAC assays, fluorometric or radiometric substrates are used. For NOX assays, superoxide production is measured using chemiluminescent or fluorescent probes.
Cell Assay
For in vitro cell-based assays, cells are cultured in appropriate medium and treated with Thr101 at various concentrations (typically 0.1-100 μM) for 24-72 hours. PMI activity is assessed by measuring mannose-6-phosphate and fructose-6-phosphate levels by HPLC. HDAC inhibition is assessed by measuring histone acetylation by Western blot. NOX inhibition is assessed by measuring ROS levels using fluorescent probes. Cell viability is assessed using MTT or similar assays. Gene expression changes are measured by qRT-PCR. Specific protocols depend on the cell type and the target being studied.
Animal Protocol
In vivo animal studies for Thr101 would typically use mouse models of CDG-Ia or cancer. The compound is administered orally or intraperitoneally at doses determined from pharmacokinetic studies. For CDG-Ia models, glycosylation defects are assessed by measuring glycoprotein levels. For cancer models, tumor growth is monitored. HDAC inhibition is assessed by measuring histone acetylation in tissues. NOX inhibition is assessed by measuring oxidative stress markers. Specific protocols using Thr101 are not extensively documented in the available literature.
ADME/Pharmacokinetics
Thr101 is a selenium→sulfur substituted Ebselen derivative. It is a small molecule with multiple enzyme inhibitory activities. Detailed physicochemical properties (molecular weight, formula, solubility, stability) are not extensively provided in the available literature. As a NOX inhibitor, it may have antioxidant properties. The compound's ability to inhibit multiple targets suggests it could have broad pharmacological effects. Detailed pharmacokinetic parameters are not extensively characterized.
Toxicity/Toxicokinetics
Specific toxicity data for Thr101 are not extensively provided in the available literature. As a PMI inhibitor, HDAC inhibitor, and NOX inhibitor, it would be expected to have a complex safety profile. The compound's multiple targets may lead to off-target effects. As an Ebselen derivative, it may have glutathione peroxidase-like activity, which could be protective against oxidative stress. Standard toxicology assessments would be required for therapeutic development. No specific toxicity data are reported in the available references.
References

[1]. Potent, selective, and orally available benzoisothiazolone phosphomannose isomerase inhibitors as probes for congenital disorder of glycosylation Ia. J Med Chem. 2011 May 26;54(10):3661-8.

Additional Infomation
6-Fluoro-2-(2-methylphenyl)-1,2-benzothiazol-3-one is a member of the benzothiazol class of compounds.
Thr101 is a selenium→sulfur substituted Ebselen derivative that uniquely delivers triple-pathway pharmacology. It is a selective inhibitor of phosphomannose isomerase (PMI) with an IC50 of 2.9 μM, with PMM2 sparing. Thr101 is also a dose-dependent inhibitor of HDAC1, HDAC3, HDAC4, HDAC5, HDAC6, HDAC7, HDAC8, and HDAC9. It is also a NOX inhibitor. The compound can be used for research of congenital disorder of glycosylation type Ia (CDG-Ia). No approved therapeutic status is reported.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C14H10FNOS
Molecular Weight
259.29870557785
Exact Mass
259.046
CAS #
727664-79-1
PubChem CID
1510379
Appearance
Off-white to yellow solid powder
LogP
3.5
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
1
Heavy Atom Count
18
Complexity
338
Defined Atom Stereocenter Count
0
SMILES
S1C2=C(C=CC(F)=C2)C(=O)N1C1=CC=CC=C1C
InChi Key
BUIZTXXZBDUOCR-UHFFFAOYSA-N
InChi Code
InChI=1S/C14H10FNOS/c1-9-4-2-3-5-12(9)16-14(17)11-7-6-10(15)8-13(11)18-16/h2-8H,1H3
Chemical Name
6-fluoro-2-(2-methylphenyl)-1,2-benzothiazol-3-one
Synonyms
Thr 101; Thr-101; Thr101
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.8565 mL 19.2827 mL 38.5654 mL
5 mM 0.7713 mL 3.8565 mL 7.7131 mL
10 mM 0.3857 mL 1.9283 mL 3.8565 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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