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TBT1

Cat No.:V45736 Purity: ≥98%
TBT1 is a first-generation MsbA transporter inhibitor.
TBT1
TBT1 Chemical Structure CAS No.: 52535-76-9
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
100mg
Other Sizes
Official Supplier of:
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Product Description
TBT1 is a first-generation MsbA transporter inhibitor. TBT1 is an LPS transport inhibitor and MsbA ATPase stimulator in Acinetobacter strains. TBT1 stimulates ATPase activity with EC50 of 13 µM.
TBT1 is a first-generation inhibitor of the MsbA transporter, an ATP-dependent flippase that translocates lipopolysaccharide (LPS) across the inner membrane of Gram-negative bacteria. TBT1 functions as an LPS transport inhibitor and MsbA ATPase stimulator in Acinetobacter strains. It stimulates ATPase activity with an EC₅₀ of 13 µM. TBT1 exhibits antibacterial activity against Salmonella, Pseudomonas aeruginosa, Escherichia coli, and Staphylococcus aureus, making it a valuable tool for studying bacterial infection and LPS biogenesis.
Biological Activity I Assay Protocols (From Reference)
Targets
TBT1 targets the MsbA transporter, an essential ATP-binding cassette (ABC) transporter that flips LPS from the inner leaflet to the outer leaflet of the inner membrane in Gram-negative bacteria. By inhibiting MsbA, TBT1 disrupts LPS transport and biogenesis, leading to bacterial cell death. TBT1 also stimulates MsbA ATPase activity, indicating that it may act as a substrate or allosteric modulator of the transporter. This mechanism is unique to Gram-negative bacteria and has no direct mammalian target.
ln Vitro
TBT1 exhibits antibacterial activity against a range of Gram-negative bacteria, including Salmonella, Pseudomonas aeruginosa, and Escherichia coli, as well as the Gram-positive bacterium Staphylococcus aureus. It stimulates MsbA ATPase activity with an EC₅₀ of 13 µM. The compound's ability to inhibit LPS transport and disrupt bacterial membrane integrity contributes to its antibacterial effects. TBT1 is considered a first-generation MsbA inhibitor.
ln Vivo
In vivo activity data for TBT1 are not extensively documented in the literature. Based on its in vitro antibacterial activity against clinically relevant pathogens, TBT1 is anticipated to have potential in vivo efficacy in animal models of bacterial infection. However, specific studies detailing its therapeutic efficacy, pharmacokinetics, and toxicity in animal models are limited. The compound is primarily used as a research tool for studying LPS biogenesis.
Enzyme Assay
The non-cellular enzyme/receptor binding assay for TBT1 typically involves MsbA ATPase activity assays using membrane preparations from bacteria overexpressing MsbA. ATPase activity is measured by quantifying inorganic phosphate released from ATP hydrolysis using a colorimetric or malachite green assay. TBT1 is incubated with MsbA-containing membranes and ATP, and the EC₅₀ for ATPase stimulation is calculated from dose-response curves. Alternatively, LPS transport assays using inside-out membrane vesicles can be employed.
Cell Assay
In vitro cellular assays for TBT1 typically use broth microdilution or agar dilution methods to determine minimum inhibitory concentrations (MICs) against a panel of bacterial strains, including Salmonella, Pseudomonas aeruginosa, Escherichia coli, and Staphylococcus aureus. Bacteria are cultured in appropriate media and treated with serial dilutions of TBT1. MIC values are determined as the lowest concentration that inhibits visible bacterial growth after 16-24 hours of incubation at 37°C.
Animal Protocol
In vivo animal studies for TBT1 are not well documented. Based on its antibacterial mechanism targeting LPS biogenesis, typical study designs would involve mouse models of infection using clinically relevant bacterial strains. TBT1 would be administered via intraperitoneal or intravenous injection. Bacterial load in blood and target organs, survival rates, and body weight changes would be monitored. Efficacy would be compared to standard antibiotic treatments.
ADME/Pharmacokinetics
Pharmacokinetic properties of TBT1 are not extensively characterized in the literature. As a small molecule with molecular weight 335.81 (C₁₆H₁₄ClNO₃S), it is expected to have moderate lipophilicity. The compound is soluble in DMSO. Metabolic pathways, oral bioavailability, half-life, and protein binding are not well documented. Further pharmacokinetic studies would be needed to characterize its absorption, distribution, metabolism, and excretion properties.
Toxicity/Toxicokinetics
Pharmacokinetic properties of TBT1 are not extensively characterized in the literature. As a small molecule with molecular weight 335.81 (C₁₆H₁₄ClNO₃S), it is expected to have moderate lipophilicity. The compound is soluble in DMSO. Metabolic pathways, oral bioavailability, half-life, and protein binding are not well documented. Further pharmacokinetic studies would be needed to characterize its absorption, distribution, metabolism, and excretion properties.
Additional Infomation
TBT1 is a research-grade compound intended for laboratory use only. It is not approved for clinical use as an antibacterial agent. Its primary applications include studying the MsbA transporter and LPS biogenesis in Gram-negative bacteria, investigating mechanisms of antibiotic resistance, and exploring new targets for antibacterial drug discovery. TBT1 is a valuable tool for understanding bacterial membrane biology and developing novel strategies to combat multidrug-resistant bacterial infections.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H14CLNO3S
Molecular Weight
335.805262088776
Exact Mass
335.038
CAS #
52535-76-9
PubChem CID
2259677
Appearance
Off-white to light yellow solid powder
LogP
4.7
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
3
Heavy Atom Count
22
Complexity
439
Defined Atom Stereocenter Count
0
SMILES
C1CCC2=C(C1)C(=C(S2)NC(=O)C3=CC=C(C=C3)Cl)C(=O)O
InChi Key
DUJFDTGMUKWELI-UHFFFAOYSA-N
InChi Code
InChI=1S/C16H14ClNO3S/c17-10-7-5-9(6-8-10)14(19)18-15-13(16(20)21)11-3-1-2-4-12(11)22-15/h5-8H,1-4H2,(H,18,19)(H,20,21)
Chemical Name
2-[(4-chlorobenzoyl)amino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxylic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~125 mg/mL (~372.23 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9779 mL 14.8894 mL 29.7787 mL
5 mM 0.5956 mL 2.9779 mL 5.9557 mL
10 mM 0.2978 mL 1.4889 mL 2.9779 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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