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SR12418

Cat No.:V42214 Purity: ≥98%
SR12418 is a REV-ERB-specific synthetic ligand with IC50s of 68 nM and 119 nM for REV-ERBα and REV-ERBβ, respectively.
SR12418
SR12418 Chemical Structure CAS No.: 1801185-08-9
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
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Product Description
SR12418 is a REV-ERB-specific synthetic ligand with IC50s of 68 nM and 119 nM for REV-ERBα and REV-ERBβ, respectively. SR12418 is indicated for the study of experimental autoimmune encephalomyelitis (EAE) and colitis.
SR12418 (CAS#: 1801185-08-9) is a specific synthetic ligand for the nuclear receptors REV-ERBalpha and REV-ERBbeta, which are key components of the circadian clock and regulators of metabolic and inflammatory gene expression. It is used as a chemical tool to study REV-ERB function in various disease models, including autoimmune diseases, cancer, and metabolic disorders.
Biological Activity I Assay Protocols (From Reference)
Targets
SR12418 targets the nuclear receptors REV-ERBalpha (NR1D1) and REV-ERBbeta (NR1D2). As a synthetic ligand, it likely acts as a REV-ERB agonist, regulating the expression of target genes involved in the circadian rhythm, lipid and glucose metabolism, and inflammatory responses. Modulation of REV-ERB activity has been shown to regulate TH17 cell differentiation and IL-17A production.
ln Vitro
TH17 cell proliferation is inhibited by SR12418 (5 μM; 96 hours) [1]. In TH17 polarizing circumstances, SR12418 (5 and 10 μM; 4 d) suppresses cell differentiation [1].
In a TR-FRET (Time-Resolved Fluorescence Resonance Energy Transfer) biochemical assay, SR12418 binds to REV-ERBalpha with an IC50 of 68 nM and to REV-ERBbeta with an IC50 of 119 nM. In cellular assays using EL4 cells (mouse lymphoma line), SR12418 (5 uM) inhibits IL-17A expression and suppresses TH17 cell differentiation, demonstrating its ability to modulate this key inflammatory pathway.
ln Vivo
SR12418 (ip; 50 mg/kg; twice daily) inhibits the development and severity of experimental autoimmune encephalomyelitis [1]. SR12418 (ip; 50 mg/kg; twice daily; starting on day 18 post-immunization) has shown efficacy in an intervention study in relapsing-remitting experimental autoimmune encephalomyelitis [1].
In a mouse model of relapsing-remitting experimental autoimmune encephalomyelitis (RR-EAE, a model for multiple sclerosis), SR12418 is efficacious. It inhibits the development and severity of disease when administered intraperitoneally at a dose of 50 mg/kg twice daily. When treatment is started on day 18 post-immunization (an intervention study), it still shows efficacy, reducing disease severity in an established model. It is also used in colitis research.
Enzyme Assay
The binding affinity is determined using a TR-FRET competitive binding assay. A recombinant LanthaScreen™ REV-ERBalpha ligand binding domain (LBD) tagged with GST is mixed with a terbium-labeled anti-GST antibody, a fluorescent REV-ERBalpha tracer, and varying concentrations of SR12418. After incubation, the TR-FRET ratio (520 nm/490 nm) is measured. The binding of SR12418 competes with the tracer, leading to a loss of FRET signal and allowing for the calculation of the IC50.
Cell Assay
RT-PCR[1]
Cell Types: TH17 Cell
Tested Concentrations: 5 μM
Incubation Duration: 96 hrs (hours)
Experimental Results: Inhibition of TH17-mediated gene expression and Nfil3.

Cell Differentiation Assay[1]
Cell Types: Mouse CD4+ T cells
Tested Concentrations: 5 and 10 μM
Incubation Duration: 4 days
Experimental Results: Inhibition of TH17 cell differentiation in a dose-dependent manner.
The cellular activity is assessed using EL4 T cells or primary mouse CD4+ T cells under TH17-skewing conditions. For EL4 cells, they are stimulated with PMA/ionomycin in the presence or absence of SR12418 (e.g., 5 microM) for 48-96 hours. IL-17A production is then measured by ELISA. For primary TH17 cell differentiation, naive CD4+ T cells are cultured under TH17 polarizing conditions (TGF-beta + IL-6 or IL-23) for 4 days. The percentage of IL-17A-producing CD4+ T cells is analyzed by flow cytometry after intracellular staining.
Animal Protocol
Animal/Disease Models: C57BL/6 mice induced with experimental autoimmune encephalomyelitis (EAE) [1]
Doses: 50 mg/kg
Route of Administration: intraperitoneal (ip) injection; 50 mg/kg; twice (two times) daily
Experimental Results: diminished disease The incidence is approximately 20% of mice. demonstrated no obvious signs of toxicity.

Animal/Disease Models: PLP139-151-induced relapsing-remitting EAE (R-EAE) in SJL/J mice [1]
Doses: 50 mg/kg
Route of Administration: intraperitoneal (ip) injection; intraperitoneal (ip) injection. 50 mg/kg; twice (two times) daily; starting on day 18 post-immunization
Experimental Results: Resulted in Dramatically diminished relapse severity compared to vehicle control. demonstrated a significant reduction in the frequency and number of CD4+ and CD8+ effector cells (CD44hi).
In a mouse model of relapsing-remitting EAE, female SJL/J mice are immunized with PLP139-151 peptide/CFA to induce EAE. Mice are scored daily for clinical signs of disease. SR12418 is dissolved in a vehicle (e.g., 5% DMSO, 30% Kolliphor HS15, 65% saline) and administered intraperitoneally (i.p.) at a dose of 50 mg/kg twice daily, starting either at the time of immunization (preventative protocol) or at day 18 post-immunization (intervention protocol). Clinical scores are monitored to assess the compound's ability to prevent or reverse disease progression.
ADME/Pharmacokinetics
Specific pharmacokinetic parameters for SR12418 are not detailed. As a synthetic small molecule with in vivo activity, it is designed to have suitable properties for systemic administration. In the EAE studies, it is administered via intraperitoneal injection, which provides good bioavailability. Its half-life and tissue distribution properties would be consistent with its use as a research tool in acute and chronic disease models.
Toxicity/Toxicokinetics
Specific toxicological data for SR12418 are not detailed. As a REV-ERB ligand, its primary pharmacodynamic effects on circadian rhythm and metabolism could lead to potential toxicities. Since it is a research-grade chemical, no extensive toxicology package (e.g., safety pharmacology, genotoxicity) is publicly available. Its use in mice at the reported dose (50 mg/kg i.p.) is described as not causing apparent adverse effects in the EAE model.
References

[1]. REV-ERBα Regulates TH17 Cell Development and Autoimmunity. Cell Rep. 2018 Dec 26;25(13):3733-3749.e8.

[2]. Targeting REV-ERBα for therapeutic purposes: promises and challenges. Theranostics. 2020 Mar 4;10(9):4168-4182.

Additional Infomation
SR12418 is a research-grade chemical tool for studying the REV-ERB nuclear receptors. It is a valuable tool for the “chemical biology” of the circadian clock, allowing researchers to manipulate circadian gene expression and study its effect on TH17 cell differentiation and autoimmunity. As of the latest updates, it is not a clinical drug candidate and is used exclusively for in vitro and in vivo pre-clinical research.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C31H30FNO3
Molecular Weight
483.57
Exact Mass
483.22
CAS #
1801185-08-9
PubChem CID
91820666
Appearance
White to off-white solid powder
LogP
6.9
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
6
Heavy Atom Count
36
Complexity
730
Defined Atom Stereocenter Count
1
SMILES
O(C(C)(C)C)C1C=CC(=CC=1)OC[C@@H]1CC2C(=CC=C(C=2)F)CN1C(C1=CC=CC2C=CC=CC1=2)=O
InChi Key
JIWBEKKHQWSDNN-VWLOTQADSA-N
InChi Code
InChI=1S/C31H30FNO3/c1-31(2,3)36-27-15-13-26(14-16-27)35-20-25-18-23-17-24(32)12-11-22(23)19-33(25)30(34)29-10-6-8-21-7-4-5-9-28(21)29/h4-17,25H,18-20H2,1-3H3/t25-/m0/s1
Chemical Name
[(3S)-6-fluoro-3-[[4-[(2-methylpropan-2-yl)oxy]phenoxy]methyl]-3,4-dihydro-1H-isoquinolin-2-yl]-naphthalen-1-ylmethanone
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0680 mL 10.3398 mL 20.6795 mL
5 mM 0.4136 mL 2.0680 mL 4.1359 mL
10 mM 0.2068 mL 1.0340 mL 2.0680 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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