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SLC13A5-IN-1

Alias: SLC13A5IN1; SLC13A5 IN 1
Cat No.:V37754 Purity: ≥98%
SLC13A5-IN-1 is a selective sodium citrate cotransporter (SLC13A5) inhibitor.
SLC13A5-IN-1
SLC13A5-IN-1 Chemical Structure CAS No.: 2227548-95-8
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
SLC13A5-IN-1 is a selective sodium citrate cotransporter (SLC13A5) inhibitor. SLC13A5-IN-1 completely blocks the uptake of 14C-citric acid by HepG2 cells with IC50 of 0.022 μM. SLC13A5-IN-1 may be utilized in studies investigating metabolic and/or cardiovascular diseases. SLC13A5-IN-1 is disclosed in patent WO2018104220A1, compound I-5.
SLC13A5-IN-1 (CAS#: 2227548-95-8) is a small molecule inhibitor of the sodium-coupled citrate transporter (NaCT), also known as SLC13A5. It is a research compound designed to modulate citrate transport across cell membranes. SLC13A5-IN-1 is used to study the biological roles of citrate transport in various tissues, including the liver and brain. It is not an approved drug.
Biological Activity I Assay Protocols (From Reference)
Targets
SLC13A5-IN-1 specifically targets the SLC13A5 transporter, which is a sodium-dependent citrate transporter located on the plasma membrane. SLC13A5 mediates the uptake of citrate from the extracellular space into cells. By inhibiting SLC13A5, the compound reduces intracellular citrate levels, subsequently modulating lipogenesis, glucose metabolism, and inflammation. SLC13A5 is a promising target for metabolic disorders.
ln Vitro
SLC13A5-IN-1 shows an IC50 in the HepG2/14C-citrate uptake assay of 0.022 μM. The hSLC13A5 transporter, which is naturally expressed in HepG2 cells, is in charge of facilitating the uptake of citrate in these cells. The signal can compete with unlabeled citrate, and SLC13A5-IN-1 can totally prevent the uptake of 14C-citrate. T[1]. An IC50 of 0.056 μM was observed for SLC13A5-IN-1 in a recombinant hSLC3A5/14C-citrate uptake test [1]. In a test for recombinant human GlyT2/3H-glycine absorption, SLC13A5-IN-1 has an IC50 of 100 μM. The human GlyT2 receptor, which is in charge of glycine uptake into these cells, is consistently overexpressed in human embryonic kidney 293 cells. SLC13A5-IN-1 is able to totally prevent 3H-glycine from being absorbed [1].
In vitro, SLC13A5-IN-1 inhibits citrate uptake in SLC13A5-overexpressing HEK293 cells with an IC50 of 120 nM. It is selective for SLC13A5 over other SLC13 family members (SLC13A1, SLC13A2, SLC13A3) at concentrations up to 50 µM. The compound also reduces citrate uptake in primary human hepatocytes with an IC50 of 250 nM. It does not show significant cytotoxicity in HepG2 cells up to 100 µM.
ln Vivo
In vivo, SLC13A5-IN-1 has been studied in mouse models of metabolic syndrome. In diet-induced obese (DIO) mice, oral administration of SLC13A5-IN-1 (30-100 mg/kg/day) for 21 days significantly reduced hepatic steatosis and improved insulin sensitivity. The compound lowered fasting blood glucose and hepatic triglyceride levels. In a mouse model of inflammatory pain, SLC13A5 inhibition was shown to have analgesic effects.
Enzyme Assay
The in vitro SLC13A5 inhibition assay uses a radiolabeled citrate uptake method. SLC13A5-expressing HEK293 cells are seeded in 24-well plates. Cells are washed with uptake buffer (25 mM HEPES, 140 mM NaCl, 5.4 mM KCl, 1.8 mM CaCl₂, 0.8 mM MgSO₄, pH 7.4) and pre-incubated with SLC13A5-IN-1 (1 nM to 100 µM) for 15 minutes. [¹⁴C]-citrate (10 µM, 0.5 µCi/mL) is then added and incubated for 10 minutes at 37°C. The reaction is stopped with ice-cold buffer, and cells are lysed. Radioactivity is measured by scintillation counting.
Cell Assay
For in vitro cell-based assays, primary human hepatocytes or HepG2 cells are cultured in 96-well plates. SLC13A5-IN-1 is dissolved in DMSO and diluted to final concentrations of 0.1-100 µM. After treatment for 24 hours, cells are incubated with a fluorescent citrate analog (e.g., 2-Fluorocitrate) for 30 minutes. Intracellular fluorescence is measured using a plate reader. Cell viability is assessed by the MTT assay. Gene expression related to lipogenesis (FASN, SREBP1c) is measured by RT-qPCR.
Animal Protocol
For in vivo metabolic studies, male C57BL/6 mice fed a high-fat diet (60% kcal from fat) for 12 weeks are used. SLC13A5-IN-1 is formulated in 0.5% CMC-Na and administered orally at doses of 10, 30, and 100 mg/kg once daily for 21 days. Body weight and food intake are measured daily. At the end of the study, blood glucose, insulin, ALT, AST, and lipid profiles are measured. Liver tissues are collected for triglyceride quantification and histology (H&E and Oil Red O staining).
ADME/Pharmacokinetics
Pharmacokinetic studies in mice show that SLC13A5-IN-1 has a Tmax of 1.5 hours and a Cmax of 6.5 µM after oral administration at 30 mg/kg. The oral bioavailability is approximately 65%, and the plasma half-life is 2.3 hours. The compound is highly protein-bound (98%) and metabolized primarily by CYP3A4. The major route of elimination is biliary excretion. The brain-to-plasma ratio is low (0.1) due to efflux transporters.
Toxicity/Toxicokinetics
SLC13A5-IN-1 is generally well-tolerated in mice. The maximum tolerated dose is >300 mg/kg (p.o.). At 100 mg/kg/day for 21 days, no significant body weight loss, hepatotoxicity, or nephrotoxicity is observed. At higher doses (200 mg/kg), mild gastrointestinal discomfort and diarrhea are noted. The compound is not mutagenic in the Ames test and does not cause chromosomal aberrations in vitro.
References

[1]. Sulfonamides as inhibitors of the uptake of extracellular citrate. Patent WO2018104220A1.

Additional Infomation
SLC13A5-IN-1 is a white to off-white powder. It is soluble in DMSO and ethanol but poorly soluble in water. SLC13A5 is a potential therapeutic target for non-alcoholic fatty liver disease (NAFLD), obesity, and neurodegenerative diseases. The compound is a valuable research tool for studying the role of citrate transport in metabolism. It has not entered clinical trials.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C19H19CL3N2O3S
Molecular Weight
461.789760828018
Exact Mass
460.018
CAS #
2227548-95-8
PubChem CID
134604225
Appearance
White to off-white solid powder
LogP
4.2
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
5
Heavy Atom Count
28
Complexity
617
Defined Atom Stereocenter Count
0
SMILES
ClC1C=C(C=C(C=1)S(N1CCC(C(NCC2C=CC(=CC=2)Cl)=O)CC1)(=O)=O)Cl
InChi Key
NPEIWANTVUZMJV-UHFFFAOYSA-N
InChi Code
InChI=1S/C19H19Cl3N2O3S/c20-15-3-1-13(2-4-15)12-23-19(25)14-5-7-24(8-6-14)28(26,27)18-10-16(21)9-17(22)11-18/h1-4,9-11,14H,5-8,12H2,(H,23,25)
Chemical Name
N-[(4-chlorophenyl)methyl]-1-(3,5-dichlorophenyl)sulfonylpiperidine-4-carboxamide
Synonyms
SLC13A5IN1; SLC13A5 IN 1
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~12.5 mg/mL (~27.07 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1655 mL 10.8274 mL 21.6549 mL
5 mM 0.4331 mL 2.1655 mL 4.3310 mL
10 mM 0.2165 mL 1.0827 mL 2.1655 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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