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Sigma-LIGAND-1 HCl

Cat No.:V49076 Purity: ≥98%
Sigma-LIGAND-1 HCl is a selective sigma receptor ligand with IC50 of 16 nM and 19 nM at DTG and PPP sites respectively.
Sigma-LIGAND-1 HCl
Sigma-LIGAND-1 HCl Chemical Structure CAS No.: 139652-86-1
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
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Other Forms of Sigma-LIGAND-1 HCl:

  • Sigma-LIGAND-1
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Sigma-LIGAND-1 HCl is a selective sigma receptor ligand with IC50 of 16 nM and 19 nM at DTG and PPP sites respectively. Sigma-LIGAND-1 HCl has Ki of 4000 nM for dopamine D2 receptors.
Sigma-LIGAND-1 HCl (CAS 139652-86-1), also known as sigma ligand-1 hydrochloride, is a selective ligand for the sigma-1 receptor. It has a molecular weight of 360.34 g/mol and formula C19H28Cl2N2O. The sigma-1 receptor is a chaperone protein located in the endoplasmic reticulum that modulates various cellular functions, including calcium signaling, ion channel activity, and neuroprotection. Sigma-LIGAND-1 HCl is used in neuropharmacology research.
Biological Activity I Assay Protocols (From Reference)
Targets
Sigma-LIGAND-1 HCl targets the sigma-1 receptor (σ1R), a chaperone protein located in the endoplasmic reticulum. The sigma-1 receptor modulates various cellular functions, including calcium signaling, ion channel activity, and neuroprotection. It is implicated in several neurological and psychiatric disorders, including depression, anxiety, schizophrenia, and neurodegenerative diseases. By binding to the sigma-1 receptor, the compound modulates its activity and downstream signaling pathways.
ln Vitro
Sigma-LIGAND-1 HCl is a selective ligand for the sigma-1 receptor. It modulates the activity of the sigma-1 receptor, which is involved in calcium signaling, ion channel modulation, and neuroprotection. The compound's specific binding affinity (Ki) and selectivity for the sigma-1 receptor over other targets are not extensively documented. It is used in neuropharmacology research to study the role of sigma-1 receptors.
ln Vivo
Using mice as a behavioral model susceptible to antipsychotic drugs, amphetamine-induced hyperlocomotion was reversed by administering Sigma-LIGAND-1 hydrochloride. The structural analogs of sigma-LIGAND-1 hydrochloride and its derivatives may have antipsychotic properties [1].
In vivo, Sigma-LIGAND-1 HCl is used in research to study the role of sigma-1 receptors in neurological and psychiatric disorders. As a sigma-1 receptor ligand, it may modulate neuroprotection, pain, and psychiatric symptoms in animal models. Specific in vivo efficacy data and detailed animal model studies are not extensively documented. The compound is intended for research use only.
Enzyme Assay
The in vitro receptor binding assay for Sigma-LIGAND-1 HCl typically involves measuring its affinity for the sigma-1 receptor using radioligand binding. Membrane preparations from cells expressing the sigma-1 receptor are incubated with varying concentrations of the compound (typically 0.001-100 µM) and a radiolabeled ligand such as [3H]pentazocine. The binding affinity is determined by competition binding analysis. The compound is dissolved in DMSO and diluted in assay buffer.
Cell Assay
In vitro cellular assays for Sigma-LIGAND-1 HCl typically involve treating cells expressing the sigma-1 receptor with the compound at concentrations ranging from 0.001 to 10 µM. Receptor modulation is assessed by measuring downstream signaling effects, such as calcium mobilization, ion channel activity, or neuroprotective effects. Cell viability is assessed using MTT or other standard assays. The compound is dissolved in DMSO and diluted in cell culture medium.
Animal Protocol
In vivo animal studies for Sigma-LIGAND-1 HCl typically involve administration to mice or rats via oral gavage or intraperitoneal injection at doses determined from preliminary studies. Neurological and psychiatric disease models (such as depression, anxiety, or neurodegeneration models) are used to evaluate efficacy. Behavioral tests are performed to assess the compound's effects on mood, anxiety, and cognitive function. Neuroprotective effects are assessed by histological and biochemical analysis.
ADME/Pharmacokinetics
Sigma-LIGAND-1 HCl has a molecular weight of 360.34 g/mol and formula C19H28Cl2N2O. It is soluble in DMSO and other organic solvents. Recommended storage is powder at -20°C for up to 3 years and in solvent at -80°C for up to 6 months. Detailed PK parameters such as half-life, Cmax, AUC, and bioavailability would require experimental determination.
Toxicity/Toxicokinetics
Sigma-LIGAND-1 HCl is intended for research use only and is not approved for human therapeutic applications. As a sigma-1 receptor ligand, it may affect normal cellular functions, which could contribute to potential side effects. Standard preclinical toxicity assessments would include acute toxicity studies in rodents, repeated-dose toxicity studies, and assessment of off-target effects.
References

[1]. (Aminoalkoxy)chromones. Selective sigma receptor ligands. J Med Chem. 1992 May 1;35(9):1526-35.

Additional Infomation
Sigma-LIGAND-1 HCl (CAS 139652-86-1) is a selective ligand for the sigma-1 receptor. It has a molecular weight of 360.34 g/mol and formula C19H28Cl2N2O. The compound is used in neuropharmacology research to study the role of sigma-1 receptors in neurological and psychiatric disorders. Sigma-LIGAND-1 HCl is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C27H33NO4.HCL
Molecular Weight
472.01616
Exact Mass
471.218
CAS #
139652-86-1
Related CAS #
Sigma-LIGAND-1;139652-01-0
PubChem CID
9890958
Appearance
Off-white to light yellow solid powder
Boiling Point
615.5ºC at 760 mmHg
Flash Point
326.1ºC
Vapour Pressure
5.23E-16mmHg at 25°C
LogP
5.904
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
9
Heavy Atom Count
33
Complexity
634
Defined Atom Stereocenter Count
0
SMILES
CC1=C(OC2=C(C1=O)C=C(C=C2)OCCCCCCN3CCC(CC3)O)C4=CC=CC=C4.Cl
InChi Key
GWSBQIZSTCDSLE-UHFFFAOYSA-N
InChi Code
InChI=1S/C27H33NO4.ClH/c1-20-26(30)24-19-23(11-12-25(24)32-27(20)21-9-5-4-6-10-21)31-18-8-3-2-7-15-28-16-13-22(29)14-17-28;/h4-6,9-12,19,22,29H,2-3,7-8,13-18H2,1H3;1H
Chemical Name
6-[6-(4-hydroxypiperidin-1-yl)hexoxy]-3-methyl-2-phenylchromen-4-one;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~12.5 mg/mL (~26.48 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1186 mL 10.5928 mL 21.1855 mL
5 mM 0.4237 mL 2.1186 mL 4.2371 mL
10 mM 0.2119 mL 1.0593 mL 2.1186 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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