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SD-1029

Alias: SD-1029 SD1029 SD 1029
Cat No.:V6330 Purity: ≥98%
SD-1029 is a JAK2/STAT3 inhibitor.
SD-1029
SD-1029 Chemical Structure CAS No.: 118372-34-2
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
SD-1029 is a JAK2/STAT3 inhibitor. SD-1029 inhibits STAT3 nuclear translocation. SD-1029 inhibits JAK2 phosphorylation, thereby inhibiting STAT3 activation.
SD-1029 (JAK2 Inhibitor III) (CAS#: 118372-34-2) is a cell-permeable xanthenedione compound that acts as a JAK2-selective inhibitor. It has a molecular weight of 639.25 g/mol. SD-1029 inhibits the phosphorylation of JAK2, thereby inhibiting the activation of STAT3. It has been shown to inhibit the nuclear translocation of STAT3, a necessary step for STAT3 to function as a DNA-binding transcription factor. SD-1029 effectively inhibits cell proliferation in JAK-activated cell lines and induces apoptosis in ovarian cancer cells. It is a research compound used to study JAK-STAT signaling.
Biological Activity I Assay Protocols (From Reference)
Targets
SD-1029 targets Janus kinase 2 (JAK2) and the signal transducer and activator of transcription 3 (STAT3). It is a JAK2-selective inhibitor that exhibits much less effect on the cellular phosphorylation levels of Jak1 and Src and shows no significant inhibition towards a panel of 49 other protein kinases in cell-free kinase assays. SD-1029 inhibits the phosphorylation of JAK2, which in turn inhibits the activation of STAT3. It also inhibits the nuclear translocation of STAT3, disrupting the JAK-STAT signaling pathway.
ln Vitro
SD-1029 (10 μM) reduces EGFP-Stat3 nuclear translocation in BHK-21 and U-2OS cells [1]. SD-1029 (5 and 10 μM; 24 hours) inhibits cell growth and induces apoptosis in OVCAR8TR ovarian cancer cells [1]. SD-1029 (10 μM; 24 hours) inhibits p-Stat3 levels in human breast and ovarian cancer cell lines [1]. SD-1029 not only inhibits JAK2 phosphorylation, but also inhibits STAT1 and STAT3 phosphorylation. SD-1029 strongly inhibits Tyk2 phosphorylation, indicating that both JAK2 and Tyk2 are upstream requirements for IL-23-induced IL-23R expression [2].
In vitro, SD-1029 is a JAK2-selective inhibitor that effectively inhibits cell proliferation in JAK-activated BA/F3 cell lines. It inhibits the phosphorylation and nuclear translocation of cellular Stat3. SD-1029 inhibits EGFP-Stat3 nuclear translocation in BHK-21 and U-2OS cells. It suppresses p-Stat3 levels in human breast and ovarian cancer cell lines, inhibits cell growth, and induces apoptosis in OVCAR8TR ovarian cancer cells. These in vitro studies confirm SD-1029's activity as a JAK2/STAT3 inhibitor.
ln Vivo
In vivo activity data for SD-1029 is limited, as the compound is primarily used as a research tool in in vitro studies. However, its mechanism of action—inhibiting JAK2 and STAT3 signaling—suggests potential in vivo applications in cancer research. The compound could be used in animal models of cancer to study the effects of JAK-STAT inhibition on tumor growth. However, specific in vivo protocols and results are not detailed in standard product descriptions.
Enzyme Assay
In vitro enzyme assays for SD-1029 measure its inhibition of JAK2 kinase activity. JAK2 enzyme is incubated with a peptide substrate and ATP in the presence of varying concentrations of SD-1029. The incorporation of phosphate into the substrate is measured, and the IC50 is determined from the dose-response curve. Selectivity is assessed by testing the compound against a panel of other kinases, including Jak1 and Src. These assays confirm SD-1029's potency and selectivity as a JAK2 inhibitor.
Cell Assay
Cell proliferation assay [1]
Cell Types: OVCAR8TR ovarian cancer cells
Tested Concentrations: 5 and 10 μM
Incubation Duration: 24 hrs (hours)
Experimental Results: Down-regulate cell proliferation and induce apoptosis. Treatment resulted in a significant 20-fold induction of apoptosis in OVCAR8TR cells expressing constitutively activated Stat3.

Western Blot Analysis[1]
Cell Types: MDA-MB-468 and MDA435 (breast cancer), OV1063 (ovarian cancer), and paclitaxel-resistant ovarian cancer sublines SKOV-3TR and OVCAR8TR.
Tested Concentrations: 10 μM
Incubation Duration: 24 hrs (hours)
Experimental Results: Result in diminished pStat3 levels.
In vitro cell-based assays for SD-1029 are used to study its effects on JAK-STAT signaling and cancer cell biology. Cancer cell lines (e.g., breast, ovarian) are treated with SD-1029 at various concentrations. The phosphorylation of STAT3 is measured by Western blotting using phospho-specific antibodies. The nuclear translocation of STAT3 is assessed by immunofluorescence. Cell proliferation is measured using assays such as MTT or CellTiter-Glo. Apoptosis is measured using Annexin V staining or caspase-3/7 activation assays. These assays confirm the compound's activity as a JAK2/STAT3 inhibitor.
Animal Protocol
In vivo animal experiments for SD-1029 are not extensively described in the available literature. As a research compound, its use in vivo would be determined by the specific research question being addressed. A typical protocol for studying a JAK2 inhibitor would involve its administration to animal models of cancer or inflammatory diseases. The compound would be formulated for injection, and endpoints such as tumor growth or inflammatory markers would be assessed. However, specific protocols for SD-1029 are not detailed.
ADME/Pharmacokinetics
SD-1029 has a molecular weight of 639.25 g/mol. It is a solid compound with a purity of >80% by HPLC (sum of isomers). It is soluble in DMSO and other organic solvents. For storage, it is recommended to keep the powder at -20°C. Detailed pharmacokinetic properties such as absorption, distribution, metabolism, and excretion (ADME) have not been extensively characterized. As a research compound, its stability is maintained by proper storage as a dry powder.
Toxicity/Toxicokinetics
Detailed toxicity data for SD-1029 is not provided in standard product descriptions. As a research compound, its toxicity profile has not been extensively characterized. SD-1029 is a JAK2 inhibitor, and its toxicity would be related to its effects on JAK-STAT signaling in normal tissues. However, comprehensive toxicological studies have not been reported. As with all research chemicals, standard laboratory safety precautions should be followed when handling SD-1029. Its use is limited to research applications.
References

[1]. SD-1029 inhibits signal transducer and activator of transcription 3 nuclear translocation. Clin Cancer Res. 2006 Nov 15;12(22):6844-52.

[2]. Interleukin-23-induced interleukin-23 receptor subunit expression is mediated by the Janus kinase/signal transducer and activation of transcription pathway in human CD4 T cells. J Interferon Cytokine Res. 2011 Apr;31(4):363-71.

Additional Infomation
SD-1029 is a research compound and is not approved for any clinical or therapeutic use. It is a cell-permeable xanthenedione compound that acts as a JAK2-selective inhibitor. SD-1029 inhibits the phosphorylation of JAK2, thereby inhibiting the activation of STAT3. It has been shown to inhibit the nuclear translocation of STAT3. SD-1029 effectively inhibits cell proliferation in JAK-activated cell lines and induces apoptosis in ovarian cancer cells. It is a valuable research tool for studying JAK-STAT signaling in cancer and other diseases.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H32BR2CL2N2O3
Molecular Weight
639.25
Exact Mass
636.015
CAS #
118372-34-2
PubChem CID
44543754
Appearance
Typically exists as solid at room temperature
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
5
Heavy Atom Count
34
Complexity
781
Defined Atom Stereocenter Count
0
SMILES
C1(C2=CC=C(Cl)C(Cl)=C2)C2=C(CCC(CN(C)C)C2=O)OC2=C1C(=O)C(CN(C)C)CC2.[H]Br.[H]Br
InChi Key
INKLAKXQHDQKKZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C25H30Cl2N2O3.2BrH/c1-28(2)12-15-6-9-19-22(24(15)30)21(14-5-8-17(26)18(27)11-14)23-20(32-19)10-7-16(25(23)31)13-29(3)4;;/h5,8,11,15-16,21H,6-7,9-10,12-13H2,1-4H3;2*1H
Chemical Name
9-(3,4-dichlorophenyl)-2,7-bis[(dimethylamino)methyl]-3,4,5,6,7,9-hexahydro-2H-xanthene-1,8-dione;dihydrobromide
Synonyms
SD-1029 SD1029 SD 1029
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.5643 mL 7.8217 mL 15.6433 mL
5 mM 0.3129 mL 1.5643 mL 3.1287 mL
10 mM 0.1564 mL 0.7822 mL 1.5643 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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