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Sancycline HCl

Alias: GS-2147 NSC-51812 GS21476-Demethyl-6-deoxytetracycline GS 2147 Sancycline HClBonomycin NSC 51812 Sanciclina
Cat No.:V7256 Purity: ≥98%
Sancycline HCl (GS-2147; Bonomycin; NSC51812), the hydrochloride salt ofSancycline,is a semi-synthetic tetracycline antibiotic that acts by binding reversiblyto the 30S ribosomal subunit and inhibiting protein translation by blocking entry of aminoacyl-tRNA into the ribosome A site.
Sancycline HCl
Sancycline HCl Chemical Structure CAS No.: 6625-20-3
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price
50mg
Other Sizes

Other Forms of Sancycline HCl:

  • Sancycline
Official Supplier of:
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Product Description
Sancycline HCl (GS-2147; Bonomycin; NSC51812), the hydrochloride salt of Sancycline, is a semi-synthetic tetracycline antibiotic that acts by binding reversibly to the 30S ribosomal subunit and inhibiting protein translation by blocking entry of aminoacyl-tRNA into the ribosome A site. It was first reported in 1962 and is more active than tetracycline against 339 strains of anaerobic bacteria (average MIC90s = 1 and 32 μg/ml, respectively). As the simplest of the early tetracyclines, sancycline was the first to be totally synthesised by Conover and co-workers. Like other tetracyclines, sancycline acts by reversibly binding to the 30S ribosomal subunit and inhibiting protein translation by blocking entry of aminoacyl-tRNA into the ribosome A site.
Sancycline HCl (also known as CMT-3 or COL-3) is a chemically modified tetracycline analog that lacks antimicrobial properties but effectively inhibits matrix metalloproteinases (MMPs). It has been shown to strongly inhibit proliferation and metastasis of various cancer cells, but its efficacy is restricted by poor water solubility. This study developed a nanostructured lipid carrier (NLC) formulation to improve its solubility and delivery. [1]
Sancycline HCl (CAS#: 6625-20-3) is the hydrochloride salt of a rare semi-synthetic tetracycline antibiotic prepared by hydrogenolysis of the chloro and benzylic hydroxy moieties of declomycin. It was first reported in 1962. Sancycline is more active than tetracycline against 339 strains of anaerobic bacteria (average MIC90s = 1 and 32 μg/ml, respectively). It has a molecular weight of 450.87 g/mol with a molecular formula of C21H23ClN2O7. The compound acts by binding reversibly to the 30S ribosomal subunit.
Biological Activity I Assay Protocols (From Reference)
Targets
Sancycline HCl targets the 30S ribosomal subunit in bacteria. As a tetracycline-class antimicrobial agent, it inhibits protein synthesis within susceptible bacteria by binding reversibly to the 30S ribosomal subunit, preventing the binding of aminoacyl-tRNA to the ribosome A site. The compound has broad-spectrum activity against various Gram-positive and Gram-negative bacteria. It is active against tetracycline-resistant E. coli strains.
ln Vitro
In vitro release of pure Sancycline HCl from suspension: in PBS (pH 7.4 and pH 5.6, both with 0.5% Tween 80), approximately 95% of the drug was released within 10 hours, showing a burst release profile. [1]
Cytotoxicity of pure Sancycline HCl against HeLa cells: at 20 µM for 24 h, cell viability was 70.9 ± 7.5%; at 20 µM for 48 h, cell viability was 61.1 ± 4.4%. [1]
Morphological changes: HeLa cells treated with 20 µM Sancycline HCl for 6 h showed no obvious effect on cell morphology. [1]
In vitro, Sancycline HCl is more active than tetracycline against 339 strains of anaerobic bacteria with average MIC90s of 1 μg/ml compared to 32 μg/ml for tetracycline. It is a broad-spectrum tetracycline-class antibiotic known for its exceptional potency against various Gram-positive and Gram-negative bacteria. The compound is active against tetracycline-resistant E. coli. Its antibacterial activity has been characterized against a wide range of bacterial pathogens.
ln Vivo
In vivo, Sancycline HCl has been studied for its antibacterial activity. As a semi-synthetic tetracycline, it has potential applications in treating bacterial infections. Studies have examined its efficacy in animal models of infection. Its pharmacokinetic properties and tissue distribution have been characterized. The compound's activity against tetracycline-resistant strains makes it relevant for antibiotic resistance research.
Enzyme Assay
In cell-free biochemical assays, Sancycline HCl is evaluated for its ability to bind to the 30S ribosomal subunit and inhibit protein synthesis. Ribosomal binding assays measure the compound's affinity for the 30S subunit. Its purity and molecular weight (450.87 g/mol) are characterized using analytical techniques. These assays confirm the compound's mechanism as a tetracycline-class antibiotic.
Cell Assay
MTT assay for cytotoxicity: HeLa cells were plated in 96-well plates at 8×10³ cells per well. After 12 h, cells were exposed to various concentrations of Sancycline HCl (including 20 µM) for 24 or 48 h. MTT solution was added to a final concentration of 0.5 mg/mL and incubated for 4 h at 37°C. Formazan crystals were solubilized with 150 µL DMSO, and absorbance was measured at 570 nm with background correction at 630 nm. Untreated cells were taken as 100% viable. [1]
In vitro release assay: Freshly prepared Sancycline HCl suspension (5 mL; 100 µg/mL) was placed into a pre-swelled dialysis bag (7 kDa MW cutoff). The bag was incubated in release medium (PBS pH 7.4 or pH 5.5, 20 mL with 0.5% Tween 80) at 37°C under horizontal shaking. At predetermined time points, the bag was transferred to fresh medium. Released CMT-3 content was determined by HPLC (mobile phase MeOH:H₂O with 0.5% TFA = 30:70, flow rate 1 mL/min, wavelength 360 nm). [1]
Cell morphology observation: HeLa cells were seeded in 6-well plates at 3×10⁶ per well. After 12 h, cells were exposed to 20 µM Sancycline HCl for 6 h, and cell morphology was captured by digital camera. [1]
Cellular assays for Sancycline HCl involve evaluating its antibacterial activity against various bacterial strains. Minimum inhibitory concentration (MIC) assays are performed to determine the compound's potency against Gram-positive and Gram-negative bacteria. Its activity against tetracycline-resistant strains is assessed. The compound's effects on bacterial protein synthesis are studied.
Animal Protocol
Animal models for Sancycline HCl include models of bacterial infection. The compound is typically administered via injection or oral routes. Studies have examined its efficacy in treating infections caused by susceptible bacteria. Its pharmacokinetic properties and tissue distribution have been characterized in preclinical species.
ADME/Pharmacokinetics
Pharmacokinetic data for Sancycline HCl show that the compound has a molecular weight of 450.87 g/mol with a molecular formula of C21H23ClN2O7. The CAS number is 6625-20-3. The compound is soluble in DMF and DMSO. Standard handling procedures for antibiotic research compounds apply.
Toxicity/Toxicokinetics
The toxicity profile of Sancycline HCl is typical of tetracycline antibiotics. Standard safety precautions for handling pharmaceutical compounds apply. The compound is for research use only and not for human use. Appropriate handling procedures should be followed to minimize exposure.
References
2013 Jun 25;450(1-2):225-34.
Additional Infomation
Sancycline HCl (CMT-3) is a 4-demethylaminosancycline derivative of tetracycline. It lacks antimicrobial activity but inhibits matrix metalloproteinases (MMPs). It has shown anti-tumor and anti-metastatic effects in various cancer models (e.g., breast, colon, prostate, melanoma). However, its poor water solubility limits clinical use as a parenteral drug. Adverse effects observed in clinical trials (referenced from other studies) include nausea, vomiting, liver function abnormalities, diarrhea, mucositis, leukopenia, and thrombocytopenia. [1]
Sancycline HCl is a rare semi-synthetic tetracycline antibiotic more active than tetracycline against anaerobic bacteria (MIC90: 1 vs 32 μg/ml). It binds to the 30S ribosomal subunit and is active against tetracycline-resistant E. coli. It has a molecular weight of 450.87 g/mol and formula C21H23ClN2O7. The CAS number is 6625-20-3.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H23CLN2O7
Molecular Weight
450.872
Exact Mass
450.119
CAS #
6625-20-3
Related CAS #
6625-20-3 (HCl);808-26-4;
PubChem CID
54712662
Appearance
Typically exists as solid at room temperature
Density
1.61g/cm3
Boiling Point
639.9ºC at 760 mmHg
Melting Point
224-228° C (dec.)
Flash Point
340.8ºC
Index of Refraction
1.734
LogP
1.622
Hydrogen Bond Donor Count
6
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
2
Heavy Atom Count
31
Complexity
892
Defined Atom Stereocenter Count
4
SMILES
Cl.OC1=CC=CC2=C1C(=C1[C@@H](C2)C[C@H]2[C@@H](C(C(=C(O)[C@@]2(O)C1=O)C(=O)N)=O)N(C)C)O
InChi Key
CIJFGLCHAOVWRZ-QKYUADJBSA-N
InChi Code
InChI=1S/C21H22N2O7.ClH/c1-23(2)15-10-7-9-6-8-4-3-5-11(24)12(8)16(25)13(9)18(27)21(10,30)19(28)14(17(15)26)20(22)29;/h3-5,9-10,15,24-25,28,30H,6-7H2,1-2H3,(H2,22,29);1H/t9-,10-,15-,21-;/m0./s1
Chemical Name
(4S,4aS,5aR,12aR)-4-(dimethylamino)-1,10,11,12a-tetrahydroxy-3,12-dioxo-4a,5,5a,6-tetrahydro-4H-tetracene-2-carboxamide;hydrochloride
Synonyms
GS-2147 NSC-51812 GS21476-Demethyl-6-deoxytetracycline GS 2147 Sancycline HClBonomycin NSC 51812 Sanciclina
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2179 mL 11.0897 mL 22.1793 mL
5 mM 0.4436 mL 2.2179 mL 4.4359 mL
10 mM 0.2218 mL 1.1090 mL 2.2179 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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