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Ramoplanin

Cat No.:V37846 Purity: ≥98%
Ramoplanin is a glycopeptide antibiotic developed from Actinoplanes spp with activity against Gram-positive (Gram+) bacteria.
Ramoplanin
Ramoplanin Chemical Structure CAS No.: 76168-82-6
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Ramoplanin is a glycopeptide antibiotic developed from Actinoplanes spp with activity against Gram-positive (Gram+) bacteria.
Ramoplanin (CAS 76168-82-6) is a lipodepsipeptide antibiotic derived from the fermentation of Actinoplanes spp. It has a molecular weight of approximately 2550 g/mol and a complex structure containing multiple unusual amino acids and a fatty acid chain. Ramoplanin is active against Gram-positive bacteria, including methicillin-resistant Staphylococcus aureus (MRSA), vancomycin-resistant enterococci (VRE), and Clostridium difficile. It acts by inhibiting bacterial cell wall synthesis through a unique mechanism, making it a promising agent for treating infections caused by multidrug-resistant pathogens.
Biological Activity I Assay Protocols (From Reference)
Targets
Ramoplanin targets the bacterial cell wall by binding to the lipid intermediate peptidoglycan precursor (lipid I and lipid II), which are essential for cell wall synthesis. Unlike vancomycin, which binds to the D-Ala-D-Ala terminus, ramoplanin interacts with the sugars and phosphate groups of lipid II, inhibiting the transglycosylation step in peptidoglycan assembly. This blocks the formation of the cell wall, leading to osmotic lysis and bacterial death. It has potent activity against C. difficile and is used in clinical development for treating Clostridium difficile-associated diarrhea (CDAD).
ln Vitro
By means of the fermentation of Fermentation Inhibitor II synthetic peptide, ramoplanin demonstrates its bactericidal effect against both Gram fast aerobic and anaerobic bacteria [1].
In vitro, ramoplanin exhibits potent antibacterial activity with MIC₉₀ values ranging from 0.06 to 2 µg/mL against a wide range of Gram-positive bacteria, including MRSA and VRE. Time-kill studies show rapid bactericidal activity. It is also effective against spores of C. difficile, preventing their germination. The compound shows synergy with other antibiotics and has a low propensity for resistance development due to its unique target. It is inactive against Gram-negative bacteria due to the outer membrane barrier.
ln Vivo
Ramoplanin (100, 500 μg/mL; vascular wall; for 8 days) reduces the amount of vancomycin-resistant enterococci (VRE) to undetectable levels during treatment[1].
In vivo, ramoplanin has been evaluated in animal models of C. difficile infection and in clinical trials. Oral administration in hamsters resulted in significantly reduced mortality and disease symptoms. In humans, oral ramoplanin (e.g., 100-200 mg twice daily) was shown to be effective in treating CDAD, with response rates comparable to vancomycin. Its systemic absorption after oral administration is minimal, which is advantageous for targeting intestinal infections. It is also being studied as a topical agent for skin infections.
Enzyme Assay
In vitro susceptibility testing for ramoplanin follows CLSI guidelines using broth microdilution. MICs are determined for various Gram-positive organisms. The compound's activity against C. difficile spores is assessed by spore germination and outgrowth inhibition assays. The mechanism of action is confirmed by monitoring the incorporation of radiolabeled precursors into peptidoglycan and by electron microscopy to observe cell wall damage.
Cell Assay
In vitro cellular experiments for ramoplanin are focused on its effect on C. difficile and other Gram-positive bacteria in cell culture models. The compound is added to bacterial cultures, and viability is assessed by colony counting. Its effect on toxin production (e.g., C. difficile toxins A and B) is measured by ELISA. The compound's activity in a human gut microbiome model is evaluated to assess its impact on the normal flora.
Animal Protocol
Animal/Disease Models: Female CF1 mice (25-30) g) [1]
Doses: 100 μg/ml, 500 μg/ml
Route of Administration: oral; lasted for 8 days
Experimental Results: VRE levels were undetectable in feces during treatment.
In vivo animal studies for ramoplanin are conducted in the hamster model of C. difficile infection. Hamsters are treated with antibiotics to induce susceptibility, then infected with C. difficile. Ramoplanin is administered orally. Disease severity (weight loss, diarrhea, mortality) is monitored. Intestinal bacterial counts and toxin levels are measured. Pharmacokinetic properties are determined from plasma and fecal samples. Safety is assessed by clinical observation and histopathology.
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
No absorption/Limited absorption.
The pharmacokinetic properties of ramoplanin are characterized by very low oral bioavailability (<1%) due to its large molecular size and hydrophilicity. It is not absorbed systemically but remains in the gastrointestinal tract, making it ideal for treating intestinal infections. When administered intravenously, it has a moderate half-life of 1-2 hours, but IV use is limited by toxicity. Its fecal concentrations are high after oral dosing. It is metabolized by intestinal bacteria and excreted in feces.
Toxicity/Toxicokinetics
The toxicity profile of ramoplanin is manageable. Oral administration is well-tolerated, with no significant systemic toxicity. The most common adverse events are gastrointestinal (nausea, abdominal pain). Intravenous administration is associated with dose-limiting toxicity, including infusion reactions and nephrotoxicity, limiting its systemic use. It is not approved for IV use. No significant cardiotoxicity or genotoxicity has been reported.
References

[1]. Efficacy of oral ramoplanin for inhibition of intestinal colonization by vancomycin-resistant enterococci in mice. Antimicrob Agents Chemother. 2004 Jun;48(6):2144-8.

[2]. Ramoplanin at bactericidal concentrations induces bacterial membrane depolarization in Staphylococcus aureus. Antimicrob Agents Chemother. 2014 Nov;58(11):6819-27.

Additional Infomation
Ramoplanin is a novel glycolipid antibiotic currently under development for the treatment of Clostridium difficile-associated diarrhea (CDAD). Ramoplanin has been discovered in the genus Actinoplanes, and relevant data have been reported. Indications: For the treatment of bacterial infections. Mechanism of Action: Ramoplanin is the first novel antibacterial drug to enter clinical trials. It is a glycolipid antibiotic produced by the fermentation of Actinoplanes spp. Ramoplanin blocks bacterial cell wall biosynthesis by interfering with peptidoglycan synthesis. Ramoplanin inhibits the conversion of lipid intermediate I to lipid intermediate II catalyzed by N-acetylglucosamine transferase, a step that occurs before transglycosylation and transpeptidation. Ramoplanin's mechanism of action differs from that of glycopeptide antibiotics. Unlike glycopeptides, Ramoplanin does not form a complex with the D-Ala–D-Ala sequence of cell wall precursors.
Ramoplanin is a promising antibiotic for the treatment of C. difficile-associated diarrhea and other Gram-positive infections. Its unique mechanism of action, targeting lipid II, provides activity against vancomycin-resistant strains. It has been granted orphan drug status and has completed Phase 2 clinical trials for CDAD. Its development has been pursued for oral and topical applications due to its favorable local safety profile. It represents a valuable addition to the antibiotic arsenal, particularly for resistant organisms.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C106H170N21O30CL
Molecular Weight
2254.0597
Exact Mass
2552.035
CAS #
76168-82-6
PubChem CID
16132338
Appearance
White to off-white solid powder
Density
1.5±0.1 g/cm3
Melting Point
>218 °C(dec.)
Index of Refraction
1.689
LogP
-6.39
Hydrogen Bond Donor Count
31
Hydrogen Bond Acceptor Count
32
Rotatable Bond Count
61
Heavy Atom Count
158
Complexity
4810
Defined Atom Stereocenter Count
15
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O : ~33.33 mg/mL
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.4436 mL 2.2182 mL 4.4364 mL
5 mM 0.0887 mL 0.4436 mL 0.8873 mL
10 mM 0.0444 mL 0.2218 mL 0.4436 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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